; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003494 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003494
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold234:3144092..3146784
RNA-Seq ExpressionMS003494
SyntenyMS003494
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015947.1 hypothetical protein SDJN02_21051, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-5980.5Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV--------------------VNSGICETMSDWAPVVIG
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RF+EFGNFQTSGVSILVHS LYFALICIFLLAV                    V   I E MSDWAPVVIG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV--------------------VNSGICETMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILAL +HI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

XP_008441325.2 PREDICTED: uncharacterized protein LOC103485472 isoform X2 [Cucumis melo]1.6e-6290.91Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGIC----ETMSDWAPVVIGVVLFVLLSPGLLFQFP
        MADWGPVFVAV+LFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLA V+  IC    E MSDWAPVVIGVVLFVLLSPGLLFQFP
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGIC----ETMSDWAPVVIGVVLFVLLSPGLLFQFP

Query:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        GNNRQFEFGSMKTNGKA+AIHTLIFF+LYAVFILALH+HIYTG
Subjt:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

XP_011649954.2 uncharacterized protein LOC101211888 [Cucumis sativus]1.7e-6492.96Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG
        MADWGPVFVAV+LFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV   V +GI ETMSDWAPVVIGVVLFVLLSPGLLFQFPG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        NNRQFEFGSMKTNGKA+AIHTLIFF+LYAVFILALH+HIYTG
Subjt:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

XP_015893840.1 uncharacterized protein LOC107427943 [Ziziphus jujuba]4.0e-5882.39Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAVVLF+LLTPGLL+Q+PGKSRFVEFGNFQTSGVSILVHS+LYFALICIFLLA+   + SG    M+DWAPVVIGVVLFVLL PGLLFQFPG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        +++Q EFGSMKTNGKAIA+HTLIFF LY +FILALHVHIYTG
Subjt:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

XP_038884726.1 uncharacterized protein LOC120075418 [Benincasa hispida]1.7e-6491.72Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV------VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQ
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLLAV      VN  ICE+MSDWAPVVIGVVLFVLLSPGLLFQ
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV------VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQ

Query:  FPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        FPGNNRQFEFGSMKTNGKA+AIHTLIFFILY+VFILALHVHIYTG
Subjt:  FPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

TrEMBL top hitse value%identityAlignment
A0A1S3B371 uncharacterized protein LOC103485472 isoform X27.7e-6390.91Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGIC----ETMSDWAPVVIGVVLFVLLSPGLLFQFP
        MADWGPVFVAV+LFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLA V+  IC    E MSDWAPVVIGVVLFVLLSPGLLFQFP
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGIC----ETMSDWAPVVIGVVLFVLLSPGLLFQFP

Query:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        GNNRQFEFGSMKTNGKA+AIHTLIFF+LYAVFILALH+HIYTG
Subjt:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

A0A6J1BIX5 uncharacterized protein LOC1104279236.9e-5679.58Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAVVLF+LLTPGLL+Q+PGKSRF+EFGNFQTSG+SILVHSI+YFALICIFLLAV   + SG    M+DWAPV++GVVLFVLLSPGLLF FPG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        N++Q EFGSMKTNGKAIAIHTL+FF +YAV ILA+H+HIYTG
Subjt:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

A0A6J1FLS0 uncharacterized protein LOC1114451203.1e-5668.59Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---------VNSG-------------------------
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RF+EFGNFQTSGVSILVHS LYFALICIFLLAV         VNS                          
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---------VNSG-------------------------

Query:  ------------------ICETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
                          I E MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILAL +HIYTG
Subjt:  ------------------ICETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

A0A6J1K207 uncharacterized protein LOC1114894126.9e-5667.53Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV----------VNSG------------------------
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RF+EFGNFQTSGVSILVHS LYFALICIFLLAV          VNS                         
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV----------VNSG------------------------

Query:  ---------------------ICETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
                             I E MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILAL +HIYTG
Subjt:  ---------------------ICETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

A0A6P4B5Q9 uncharacterized protein LOC1074279432.0e-5882.39Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG
        M+DWGPVFVAVVLF+LLTPGLL+Q+PGKSRFVEFGNFQTSGVSILVHS+LYFALICIFLLA+   + SG    M+DWAPVVIGVVLFVLL PGLLFQFPG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV---VNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPG

Query:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        +++Q EFGSMKTNGKAIA+HTLIFF LY +FILALHVHIYTG
Subjt:  NNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein5.1e-5167.13Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGICE----TMSDWAPVVIGVVLFVLLSPGLLFQFP
        M DWGPVFVAV LFVLLTPGLL+Q+PG+ R VEFG FQTSG+S++VH+++YF L+CI LLA +   IC     +M+DWAPV++GVVLFV+LSPGLLF  P
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGICE----TMSDWAPVVIGVVLFVLLSPGLLFQFP

Query:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        GNNR  +FG +KTNGKAIA+HTLIFF +Y + ILAL++HIYTG
Subjt:  GNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

AT3G48660.1 Protein of unknown function (DUF 3339)5.1e-1970.97Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV
        MADWGPV VAV+LFVLLTPGLL Q+P + R VEFGN QTSG SILVH+I++F LI IF +A+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV

AT5G08391.1 Protein of unknown function (DUF 3339)1.4e-2169.35Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV
        M+DWGPV V V+LFV+LTPGLL Q+PG+ ++VEFGNFQTS VS++VHS+LYF+L+C+FLLA+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV

AT5G40970.1 Protein of unknown function (DUF 3339)1.4e-2166.67Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG
        M+DWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTNGKAIA+HTLIFF  Y + ILA+++HI TG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALHVHIYTG

AT5G63500.1 Protein of unknown function (DUF 3339)9.7e-1866.13Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV
        MADWGPV +AV+LFV+L+PGLL Q+P   R VEFGN QTSG SILVH+I++F LI IF +A+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGGCCGGTGTTCGTGGCCGTGGTGCTGTTCGTTCTCCTAACCCCGGGATTGCTGGTTCAGATGCCCGGCAAGAGCCGTTTCGTGGAATTCGGGAATTT
CCAGACCAGCGGCGTCTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTCATCTGCATCTTCTTGTTGGCCGTCGTGAATAGCGGTATCTGTGAAACGATGTCGGATT
GGGCGCCAGTGGTGATCGGCGTTGTACTGTTCGTGCTGCTCTCGCCGGGGCTTCTGTTCCAATTCCCGGGGAATAATCGGCAGTTTGAGTTCGGCAGTATGAAGACCAAC
GGCAAGGCCATAGCCATTCACACTCTCATCTTCTTCATCCTCTACGCCGTCTTCATTCTCGCTCTCCATGTCCACATCTACACTGGC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGGCCGGTGTTCGTGGCCGTGGTGCTGTTCGTTCTCCTAACCCCGGGATTGCTGGTTCAGATGCCCGGCAAGAGCCGTTTCGTGGAATTCGGGAATTT
CCAGACCAGCGGCGTCTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTCATCTGCATCTTCTTGTTGGCCGTCGTGAATAGCGGTATCTGTGAAACGATGTCGGATT
GGGCGCCAGTGGTGATCGGCGTTGTACTGTTCGTGCTGCTCTCGCCGGGGCTTCTGTTCCAATTCCCGGGGAATAATCGGCAGTTTGAGTTCGGCAGTATGAAGACCAAC
GGCAAGGCCATAGCCATTCACACTCTCATCTTCTTCATCCTCTACGCCGTCTTCATTCTCGCTCTCCATGTCCACATCTACACTGGC
Protein sequenceShow/hide protein sequence
MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVVNSGICETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTN
GKAIAIHTLIFFILYAVFILALHVHIYTG