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MS003497 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003497
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold234:3147514..3147720
RNA-Seq ExpressionMS003497
SyntenyMS003497
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441321.1 PREDICTED: uncharacterized protein LOC103485471 [Cucumis melo]1.7e-2597.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        MSADWGPVV+AVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

XP_019059544.1 PREDICTED: uncharacterized protein LOC109117188 [Tarenaya hassleriana]1.4e-2492.75Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
        MSADWGPVV+AV LFILLSPGLLFQLPAR RVVEFGNMNTSGIAILVHA+I+FCILTILVIAIGIHIHF
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF

XP_022134305.1 uncharacterized protein LOC111006600 [Momordica charantia]3.4e-26100Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
        MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF

XP_022939393.1 uncharacterized protein LOC111445324 [Cucurbita moschata]2.9e-2597.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        M+ADWGPVV+AVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

XP_022961461.1 uncharacterized protein LOC111462035 [Cucurbita moschata]2.9e-2597.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        MSADWGPVV+AVALFI+LSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

TrEMBL top hitse value%identityAlignment
A0A0A0LQ54 Uncharacterized protein8.3e-2697.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        MSADWGPVV+AVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

A0A1S3B3T8 uncharacterized protein LOC1034854718.3e-2697.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        MSADWGPVV+AVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

A0A6J1BXY0 uncharacterized protein LOC1110066001.7e-26100Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
        MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF

A0A6J1JT68 uncharacterized protein LOC1114876241.4e-2597.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        MSADWGPVV+AVALFI+LSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

A0A6J1JYL4 uncharacterized protein LOC1114890521.4e-2597.06Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        M+ADWGPVV+AVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)1.6e-2178.79Show/hide
Query:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        ADWGPV +AV LF++LSPGLLFQLPAR RV+E GNM TSGI+ILVHAI+FF I+TILVIAI IHIH
Subjt:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

AT3G27027.1 Protein of unknown function (DUF 3339)3.7e-2686.96Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
        MS DWGPV++AV+LFILLSPGLLFQLPAR RVVEFGNM TSGIAILVHA I+FCILTILVIAI IHIHF
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF

AT3G48660.1 Protein of unknown function (DUF 3339)1.5e-1972.73Show/hide
Query:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        ADWGPVV+AV LF+LL+PGLLFQ+PAR RVVEFGNM TSG +ILVH IIFF ++TI  IAI +HI+
Subjt:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH

AT5G40980.1 Protein of unknown function (DUF 3339)9.7e-2786.96Show/hide
Query:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF
        MSADWGPV++AVALFILLSPGLLFQLPAR RV+EFGNM+TSGI+ILVHAII+FCILTIL+IAI IHIHF
Subjt:  MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF

AT5G63500.1 Protein of unknown function (DUF 3339)2.5e-1972.73Show/hide
Query:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH
        ADWGPV+IAV LF++LSPGLLFQ+PA  RVVEFGNM TSG +ILVHAIIFF ++TI  IAI +HI+
Subjt:  ADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCTGACTGGGGACCGGTTGTCATCGCGGTGGCGCTGTTCATCCTCCTGTCGCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAA
CATGAACACCAGTGGGATTGCCATTTTGGTGCACGCCATCATTTTCTTCTGCATACTCACCATTTTGGTCATCGCAATTGGTATTCACATACACTTT
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCTGACTGGGGACCGGTTGTCATCGCGGTGGCGCTGTTCATCCTCCTGTCGCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAA
CATGAACACCAGTGGGATTGCCATTTTGGTGCACGCCATCATTTTCTTCTGCATACTCACCATTTTGGTCATCGCAATTGGTATTCACATACACTTT
Protein sequenceShow/hide protein sequence
MSADWGPVVIAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILVIAIGIHIHF