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MS003498 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003498
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold234:3149162..3149368
RNA-Seq ExpressionMS003498
SyntenyMS003498
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OAY25532.1 hypothetical protein MANES_17G102200v8 [Manihot esculenta]1.6e-2385.51Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV++AVVLFVVLSPGVLFQLPGKGRV+EF N++TS  SVFVHT+IFFGLITIFLIAIG+HITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

XP_002509498.1 uncharacterized protein LOC8271433 [Ricinus communis]3.6e-2386.96Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV+IAVVLFVVLSPGVLFQLPG  RV+EF NL+TS +SVFVHT+IFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

XP_021648773.1 uncharacterized protein LOC110641381 [Hevea brasiliensis]7.9e-2384.06Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV++AVVLFVVLSPG+LFQLPGKGRV+EF N++TS  SVFVHT+IFFGLITIFLIAIG+HITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

XP_022134280.1 uncharacterized protein LOC111006581 [Momordica charantia]1.5e-2698.55Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPVLIAVVLFVVLSPGVLFQLPGKGRV+EFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

XP_037491426.1 uncharacterized protein LOC105632430 [Jatropha curcas]2.7e-2386.96Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV+IAVVLFVVLSPGVLFQLPGK RV+EFVN++TS +SV VHT+IFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

TrEMBL top hitse value%identityAlignment
A0A165WN85 Uncharacterized protein4.3e-2281.16Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV+IAVVLFV+L+PG+LFQLPGK R IEF N +TS +S+FVHT+IFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

A0A1S3B351 uncharacterized protein LOC1034854707.3e-2281.16Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        M DWGPVLIAV+LFVVLSPGVLFQLPG  RV++FVN++TSAISVFVH++IFFGLITIF+IAIGVHI++G
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

A0A2C9U7J2 Uncharacterized protein7.7e-2485.51Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV++AVVLFVVLSPGVLFQLPGKGRV+EF N++TS  SVFVHT+IFFGLITIFLIAIG+HITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

A0A6J1BXW3 uncharacterized protein LOC1110065817.5e-2798.55Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPVLIAVVLFVVLSPGVLFQLPGKGRV+EFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

B9RBG4 Uncharacterized protein1.7e-2386.96Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV+IAVVLFVVLSPGVLFQLPG  RV+EF NL+TS +SVFVHT+IFFGLITIFLIAIGVHITTG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)5.3e-1764.62Show/hide
Query:  ADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHI
        ADWGPV +AVVLFVVLSPG+LFQLP + RV+E  N+ TS IS+ VH ++FF +ITI +IAI +HI
Subjt:  ADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHI

AT3G27030.1 unknown protein6.9e-1757.97Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADW PVL+ VVLFV+LSPG+LF LPG  R ++F  LKT+  ++ VHTLIFF + TI ++A+ +HI TG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

AT3G48660.1 Protein of unknown function (DUF 3339)2.1e-2168.12Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPV++AV+LFV+L+PG+LFQ+P +GRV+EF N++TS  S+ VHT+IFFGLITIF IAI +HI TG
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

AT5G08391.1 Protein of unknown function (DUF 3339)4.8e-1856.52Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        M+DWGPVL+ V+LFV+L+PG+LFQLPG+ + +EF N +TSA+SV VH+L++F L+ +FL+A+ +HI  G
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

AT5G63500.1 Protein of unknown function (DUF 3339)1.2e-2172.46Show/hide
Query:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG
        MADWGPVLIAV+LFVVLSPG+LFQ+P  GRV+EF N++TS  S+ VH +IFFGLITIF IAI VHI +G
Subjt:  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGGCCGGTGCTCATCGCGGTAGTACTGTTCGTGGTTCTGAGCCCGGGAGTGCTGTTTCAACTCCCCGGAAAGGGCCGAGTGATCGAGTTCGTGAACCT
GAAAACAAGCGCCATCTCCGTCTTCGTTCACACTCTCATCTTCTTCGGCCTCATCACTATTTTTCTTATTGCTATCGGTGTTCACATCACTACTGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGGCCGGTGCTCATCGCGGTAGTACTGTTCGTGGTTCTGAGCCCGGGAGTGCTGTTTCAACTCCCCGGAAAGGGCCGAGTGATCGAGTTCGTGAACCT
GAAAACAAGCGCCATCTCCGTCTTCGTTCACACTCTCATCTTCTTCGGCCTCATCACTATTTTTCTTATTGCTATCGGTGTTCACATCACTACTGGT
Protein sequenceShow/hide protein sequence
MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVIEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG