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MS003499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:3150077..3150406
RNA-Seq ExpressionMS003499
SyntenyMS003499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056544.1 hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa]4.3e-3172.81Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRV-VHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYI
        MDSRCRARGLVKGM+GPLHGEAM    GSRK  P  SN+S CS H+SF VHHQE+  MA SN RV VHD AM NVHEA+  N YG+ VDEHIDRKAA YI
Subjt:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRV-VHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYI

Query:  SSVQERFRLEGLTN
        SSVQERF+LEGL N
Subjt:  SSVQERFRLEGLTN

KAE8652260.1 hypothetical protein Csa_022307 [Cucumis sativus]4.5e-2871.03Show/hide
Query:  ARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKP-MAQSNHRVVHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYISSVQERF
        ARGLVKGM+GPLHGEAM  SR   K  P  SN+S CS H+SF VHHQE+  MA SNHRVVHD AM NVHEA+  N YG+ VDEHIDRKA+ YISSVQERF
Subjt:  ARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKP-MAQSNHRVVHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYISSVQERF

Query:  RLEGLTN
        +LEGL N
Subjt:  RLEGLTN

KAG6578363.1 hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2365.22Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRVVHD-AM-NVHEASFLNSYGIA--VDEHIDRKAANY
        MD+RCRARGLVKGMLGPLHGE MA                SCS HVSFMVH QE+  M  SN RVVHD AM NV EA+F N  G     DEHIDRKAA Y
Subjt:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRVVHD-AM-NVHEASFLNSYGIA--VDEHIDRKAANY

Query:  ISSVQERFRLEGLTN
        ISSVQERFRLEGL N
Subjt:  ISSVQERFRLEGLTN

KAG6602687.1 hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2770.64Show/hide
Query:  MDSRCR-ARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRVVHDAMNVHEASFLNSYGIAVDEHIDRKAANYISS
        MDSRCR AR LV       HGEAMA SR + K      N+SSCSCHVSFMVHHQE+  MA SN RVVH+AMNVHEA F N YG+ VDEHIDRKAA YISS
Subjt:  MDSRCR-ARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRVVHDAMNVHEASFLNSYGIAVDEHIDRKAANYISS

Query:  VQERFRLEG
        VQERFRLEG
Subjt:  VQERFRLEG

XP_023921969.1 uncharacterized protein LOC112033429 [Quercus suber]3.3e-0739.64Show/hide
Query:  SRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRV---VHDAMNVHEASFLNSYGIAVDEHIDRKAANYISSV
        +R + RG VKG L P +  A   S      K  PS SS  +  V F+VH      AQ   +V   V D      + + N YG+  DE +D KAA+YISSV
Subjt:  SRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRV---VHDAMNVHEASFLNSYGIAVDEHIDRKAANYISSV

Query:  QERFRLEGLTN
        QERF+LE + +
Subjt:  QERFRLEGLTN

TrEMBL top hitse value%identityAlignment
A0A059APA4 Uncharacterized protein2.3e-0639.29Show/hide
Query:  MDSRCRARGLVKGMLG-PLHGEA---MACSRGSRKAKPAPSNSSSCSCHVSFMVHHQE--KPMAQSNHRVVHDAMNVHEASFLNSYGIAVDEHIDRKAAN
        M+S  +  GL+K  LG P +  A    + ++ S K  P  S+ S+    V+F+VH  +  +P AQ    +V D      A F   +G+ VDE +D KA N
Subjt:  MDSRCRARGLVKGMLG-PLHGEA---MACSRGSRKAKPAPSNSSSCSCHVSFMVHHQE--KPMAQSNHRVVHDAMNVHEASFLNSYGIAVDEHIDRKAAN

Query:  YISSVQERFRLE
        YISSVQERF+LE
Subjt:  YISSVQERFRLE

A0A0A0LQT5 Uncharacterized protein1.9e-3272.57Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKP-MAQSNHRVVHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYIS
        MDSRCRARGLVKGM+GPLHGEAM  SR   K  P  SN+S CS H+SF VHHQE+  MA SNHRVVHD AM NVHEA+  N YG+ VDEHIDRKA+ YIS
Subjt:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKP-MAQSNHRVVHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYIS

Query:  SVQERFRLEGLTN
        SVQERF+LEGL N
Subjt:  SVQERFRLEGLTN

A0A2I4E7Q1 uncharacterized protein LOC1089870434.7e-0737.7Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMACSRGSR--KAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRVV-------HDAMN---VHEASFLNSYGIAVDEHI
        M++  + RG VKG L P H  A   S   +   +K  P+ SS  +  + F+V HQ+  +AQ   + V       H+ +N   V  + + N YG+A DE +
Subjt:  MDSRCRARGLVKGMLGPLHGEAMACSRGSR--KAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRVV-------HDAMN---VHEASFLNSYGIAVDEHI

Query:  DRKAANYISSVQERFRLEGLTN
        D KAA YISSVQERF+LE + +
Subjt:  DRKAANYISSVQERFRLEGLTN

A0A5A7UMY1 Uncharacterized protein2.1e-3172.81Show/hide
Query:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRV-VHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYI
        MDSRCRARGLVKGM+GPLHGEAM    GSRK  P  SN+S CS H+SF VHHQE+  MA SN RV VHD AM NVHEA+  N YG+ VDEHIDRKAA YI
Subjt:  MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEK-PMAQSNHRV-VHD-AM-NVHEASFLNSYGIAVDEHIDRKAANYI

Query:  SSVQERFRLEGLTN
        SSVQERF+LEGL N
Subjt:  SSVQERFRLEGLTN

A0A7N2QZM2 Uncharacterized protein4.7e-0738.74Show/hide
Query:  SRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRV---VHDAMNVHEASFLNSYGIAVDEHIDRKAANYISSV
        +R + RG VKG L P +  A   S      K  PS SS  +  V F+VH      AQ   +V   V D      + + N YG+  DE +D K+A+YISSV
Subjt:  SRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRV---VHDAMNVHEASFLNSYGIAVDEHIDRKAANYISSV

Query:  QERFRLEGLTN
        QERF+LE + +
Subjt:  QERFRLEGLTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAGGTGTAGAGCAAGAGGCCTTGTGAAGGGCATGCTGGGTCCTCTCCATGGGGAAGCCATGGCTTGCAGCAGAGGTAGCAGAAAGGCAAAGCCAGCGCCATC
GAACTCCTCGTCTTGTTCGTGCCACGTTTCGTTTATGGTTCATCACCAGGAGAAGCCAATGGCTCAGTCGAACCACAGAGTCGTTCACGACGCCATGAATGTTCACGAGG
CTAGCTTTTTGAACTCTTACGGGATCGCCGTCGACGAACACATCGATCGGAAGGCGGCCAACTACATATCTTCTGTGCAAGAACGCTTTAGACTTGAGGGATTAACCAAT
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAAGGTGTAGAGCAAGAGGCCTTGTGAAGGGCATGCTGGGTCCTCTCCATGGGGAAGCCATGGCTTGCAGCAGAGGTAGCAGAAAGGCAAAGCCAGCGCCATC
GAACTCCTCGTCTTGTTCGTGCCACGTTTCGTTTATGGTTCATCACCAGGAGAAGCCAATGGCTCAGTCGAACCACAGAGTCGTTCACGACGCCATGAATGTTCACGAGG
CTAGCTTTTTGAACTCTTACGGGATCGCCGTCGACGAACACATCGATCGGAAGGCGGCCAACTACATATCTTCTGTGCAAGAACGCTTTAGACTTGAGGGATTAACCAAT
Protein sequenceShow/hide protein sequence
MDSRCRARGLVKGMLGPLHGEAMACSRGSRKAKPAPSNSSSCSCHVSFMVHHQEKPMAQSNHRVVHDAMNVHEASFLNSYGIAVDEHIDRKAANYISSVQERFRLEGLTN