; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003540 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003540
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGibberellin-regulated family protein
Genome locationscaffold234:3407689..3407871
RNA-Seq ExpressionMS003540
SyntenyMS003540
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152524.1 gibberellin-regulated protein 9 [Momordica charantia]2.3e-2996.72Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

XP_022938854.1 gibberellin-regulated protein 9 [Cucurbita moschata]2.0e-2585.25Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMK  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

XP_022993114.1 gibberellin-regulated protein 9-like [Cucurbita maxima]8.9e-2686.89Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMK  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

XP_023550961.1 gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]2.0e-2585.25Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMK  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

XP_038885058.1 gibberellin-regulated protein 9-like [Benincasa hispida]1.7e-2483.61Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CK  CSRRC K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARLKTH NKPKCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LMS4 Uncharacterized protein1.8e-2481.97Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CK  CSRRC K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

A0A1S3B2G6 gibberellin-regulated protein 91.8e-2481.97Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CK  CSRRC K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

A0A6J1DG94 gibberellin-regulated protein 91.1e-2996.72Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

A0A6J1FFC2 gibberellin-regulated protein 99.6e-2685.25Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMK  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

A0A6J1JZB3 gibberellin-regulated protein 9-like4.3e-2686.89Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++CKYACSRRCMK  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

SwissProt top hitse value%identityAlignment
P46687 Gibberellin-regulated protein 34.6e-1759.02Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC   C  RC K+SR  +C+RAC SCC RC+CVPPGT GNH LCPCYA + T   + KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

P46688 Gibberellin-regulated protein 24.1e-1862.3Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC   C  RC K+SR K+C+RAC SCCSRC+CVPPGT GN  LCPCYA + TH  + KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

P46689 Gibberellin-regulated protein 12.3e-1657.38Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC  AC  RC  + R ++C RACG+CC RC+CVPPGTYGN+  C CYA L TH  + KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

Q8GWK5 Gibberellin-regulated protein 92.6e-2065.57Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++C +AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

Q93X17 Snakin-22.4e-1862.3Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC  AC+ RC  +SR ++C RACG+CC+RC+CVPPGT GN + CPCYA L TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein1.8e-2165.57Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++C +AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

AT1G22690.2 Gibberellin-regulated family protein1.8e-2165.57Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++C +AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

AT1G22690.3 Gibberellin-regulated family protein1.8e-2165.57Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        ++C +AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

AT4G09600.1 GAST1 protein homolog 33.3e-1859.02Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC   C  RC K+SR  +C+RAC SCC RC+CVPPGT GNH LCPCYA + T   + KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

AT4G09610.1 GAST1 protein homolog 22.9e-1962.3Show/hide
Query:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
        +DC   C  RC K+SR K+C+RAC SCCSRC+CVPPGT GN  LCPCYA + TH  + KCP
Subjt:  LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGATTGCAAGTATGCGTGCTCAAGGCGATGCATGAAGGCGTCGAGAAAGAAAATATGCATGCGCGCGTGTGGAAGTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGG
CACGTACGGCAACCACCAGCTCTGCCCTTGCTATGCTCGCCTCAAGACACACGCCAACAAGCCCAAGTGCCCC
mRNA sequenceShow/hide mRNA sequence
TTAGATTGCAAGTATGCGTGCTCAAGGCGATGCATGAAGGCGTCGAGAAAGAAAATATGCATGCGCGCGTGTGGAAGTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGG
CACGTACGGCAACCACCAGCTCTGCCCTTGCTATGCTCGCCTCAAGACACACGCCAACAAGCCCAAGTGCCCC
Protein sequenceShow/hide protein sequence
LDCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP