; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003551 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003551
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-binding protein 48
Genome locationscaffold234:3483541..3486619
RNA-Seq ExpressionMS003551
SyntenyMS003551
Gene Ontology termsGO:0005654 - nucleoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034264 - RBM48, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598220.1 RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia]4.3e-11089.38Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS SE LE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

XP_022152542.1 RNA-binding protein 48-like [Momordica charantia]9.9e-123100Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQSSSEHLEGGPMSKKSRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

XP_022961642.1 RNA-binding protein 48 isoform X1 [Cucurbita moschata]5.6e-11088.94Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+SGR +GSAV S TTK TNP+HSHYTLEQK+SLEKRNYGDAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS SEHLE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]3.9e-11189.82Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS SEHLE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

XP_023545649.1 RNA-binding protein 48 [Cucurbita pepo subsp. pepo]7.4e-11088.94Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNY DAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS  EHLE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 481.4e-10687.17Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MP + DE  AVR YT+CDESR+LIVRNVPALGCGDDL KLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV NARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGR +G+AV STT KLTN + SHYTL+QKNSLEKRNYGDAALI+NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQSSSEHL+ GP SKKSR+DNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

A0A6J1BRX6 RNA-binding protein 486.1e-11089.82Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        +IQSSSEHL+ GP+SKKSRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

A0A6J1DGJ2 RNA-binding protein 484.8e-123100Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQSSSEHLEGGPMSKKSRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

A0A6J1HAQ6 RNA-binding protein 482.7e-11088.94Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+SGR +GSAV S TTK TNP+HSHYTLEQK+SLEKRNYGDAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS SEHLE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

A0A6J1K7Z4 RNA-binding protein 481.9e-11189.82Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLD

Query:  KIQSSSEHLEGGPMSKKSRVDNRRRI
        KIQS SEHLE GP+SK+SRVDNRRRI
Subjt:  KIQSSSEHLEGGPMSKKSRVDNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 481.1e-2339.63Show/hide
Query:  PRYTDEH--PAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPE
        P+Y +     AV+VYTI  ESR+L+V+ VPA+G   +L++LF+ YG +EE +P+D    ++FT+VY ++F  + +AR AKR  DE  F G +L V YAPE
Subjt:  PRYTDEH--PAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPE

Query:  FESLLDTKEKLEVRRREV------LARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKR
        +E++ +TK+KL+ RRR V       A+L S +++   V + ++  T+   +   + QKN  E R
Subjt:  FESLLDTKEKLEVRRREV------LARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKR

Q561R3 RNA-binding protein 488.7e-2144.76Show/hide
Query:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRR
        LE R+
Subjt:  LEVRR

Q5R4U2 RNA-binding protein 481.8e-2144.95Show/hide
Query:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVL
        L+VR+  V+
Subjt:  LEVRRREVL

Q5RL73 RNA-binding protein 486.7e-2144.04Show/hide
Query:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVL
        L++R+  V+
Subjt:  LEVRRREVL

Q8K2X2 RNA-binding protein 482.5e-2043.81Show/hide
Query:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++K
Subjt:  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRR
        L+ R+
Subjt:  LEVRR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6454.18Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        M RY DE PAVRVYT+CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREK
        E++ DTK+KLE RR+EVLARL+  + K +   S  TKL  PA   +     Q+  +E + +   A         +T+VSSDQ++FAS SMN+TV  VREK
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREK

Query:  LDKIQSSSEHLEGGPMS-----------------------KKSRVDNRRRI
        L+KI+ S       P S                       K++RVDNRRRI
Subjt:  LDKIQSSSEHLEGGPMS-----------------------KKSRVDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6454.18Show/hide
Query:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF
        M RY DE PAVRVYT+CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+
Subjt:  MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREK
        E++ DTK+KLE RR+EVLARL+  + K +   S  TKL  PA   +     Q+  +E + +   A         +T+VSSDQ++FAS SMN+TV  VREK
Subjt:  ESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREK

Query:  LDKIQSSSEHLEGGPMS-----------------------KKSRVDNRRRI
        L+KI+ S       P S                       K++RVDNRRRI
Subjt:  LDKIQSSSEHLEGGPMS-----------------------KKSRVDNRRRI

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein7.2e-5555.05Show/hide
Query:  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        ++CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ NA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPM
        +EVLARL+  ++K +   S  TKL  PA     L Q ++   R   +     +   + +T+VSS Q++FAS SMN+ V  VREKL+KI+ S       P 
Subjt:  REVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPM

Query:  S------KKSRVDNRRRI
        S      K++RVDNRRRI
Subjt:  S------KKSRVDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein7.2e-5555.05Show/hide
Query:  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        ++CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ NA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPM
        +EVLARL+  ++K +   S  TKL  PA     L Q ++   R   +     +   + +T+VSS Q++FAS SMN+ V  VREKL+KI+ S       P 
Subjt:  REVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPM

Query:  S------KKSRVDNRRRI
        S      K++RVDNRRRI
Subjt:  S------KKSRVDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCGCTACACAGACGAGCACCCTGCGGTTCGCGTCTATACGATTTGCGACGAGTCAAGGTTTCTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGCGATGACTT
GCTCAAATTGTTTTCCTCATACGGAAACGTCGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTGTCAAATTTCACTTGGTCGCCA
ATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAAGAGAAGCTT
GAAGTCAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGAAGATCAAAGGGATCTGCAGTAAGATCAACTACCACAAAGCTTACAAATCCTGCACATTCTCATTATAC
CCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTGCCAACCCACATGTTTCTCAAATGACAAAAGTATCCTCCGATCAGGATCACTTCG
CATCTGAATCTATGAATCGAACTGTGCATCTCGTCAGGGAAAAGCTGGACAAGATTCAATCAAGCAGTGAACATCTTGAAGGTGGACCCATGAGCAAGAAGTCACGTGTA
GACAACAGAAGAAGAATC
mRNA sequenceShow/hide mRNA sequence
ATGCCGCGCTACACAGACGAGCACCCTGCGGTTCGCGTCTATACGATTTGCGACGAGTCAAGGTTTCTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGCGATGACTT
GCTCAAATTGTTTTCCTCATACGGAAACGTCGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTGTCAAATTTCACTTGGTCGCCA
ATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAAGAGAAGCTT
GAAGTCAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGAAGATCAAAGGGATCTGCAGTAAGATCAACTACCACAAAGCTTACAAATCCTGCACATTCTCATTATAC
CCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTGCCAACCCACATGTTTCTCAAATGACAAAAGTATCCTCCGATCAGGATCACTTCG
CATCTGAATCTATGAATCGAACTGTGCATCTCGTCAGGGAAAAGCTGGACAAGATTCAATCAAGCAGTGAACATCTTGAAGGTGGACCCATGAGCAAGAAGTCACGTGTA
GACAACAGAAGAAGAATC
Protein sequenceShow/hide protein sequence
MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKL
EVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRV
DNRRRI