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MS003559 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003559
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein PARTING DANCERS
Genome locationscaffold234:3565744..3566633
RNA-Seq ExpressionMS003559
SyntenyMS003559
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0007140 - male meiotic nuclear division (biological process)
GO:0009555 - pollen development (biological process)
GO:0010845 - positive regulation of reciprocal meiotic recombination (biological process)
GO:0048236 - plant-type sporogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
InterPro domainsIPR010994 - RuvA domain 2-like
IPR039172 - Protein parting dancers


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152444.1 protein PARTING DANCERS isoform X1 [Momordica charantia]6.8e-30100Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
XP_022152445.1 protein PARTING DANCERS isoform X2 [Momordica charantia]6.8e-30100Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
XP_022938483.1 protein PARTING DANCERS [Cucurbita moschata]5.4e-2791.43Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKE ILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
XP_022992780.1 protein PARTING DANCERS [Cucurbita maxima]4.9e-2892.86Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKEYILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
XP_023549745.1 protein PARTING DANCERS [Cucurbita pepo subsp. pepo]4.9e-2892.86Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKEYILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
TrEMBL top hitse value%identityAlignment
A0A0A0LMP7 Uncharacterized protein3.4e-2790Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKEYILENTDLS +KAERIR+FFRDPK YLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
A0A6J1DDY5 protein PARTING DANCERS isoform X23.3e-30100Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
A0A6J1DG15 protein PARTING DANCERS isoform X13.3e-30100Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
A0A6J1FJ08 protein PARTING DANCERS2.6e-2791.43Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKE ILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
A0A6J1JWN6 protein PARTING DANCERS2.4e-2892.86Show/hide
Query:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        MDAFRRV++SVPG+DDHDANSLNQAIGSIEAIAKASKEYILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
SwissProt top hitse value%identityAlignment
F4IDW9 Protein PARTING DANCERS5.6e-1968.66Show/hide
Query:  FRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        F R +TS+P I+ HDAN+L QAIGSIEAIAKASKE IL NTDLS+ KA+ +  FF+DP+FYLSPK N
Subjt:  FRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Q6L5B5 Protein PARTING DANCERS homolog2.0e-2478.26Show/hide
Query:  DAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        D+F RV+TS+PGID+HDAN+L QAIGSIEAIAKASK++ILENTDLS DKAE I  FFRDP++YLSPKIN
Subjt:  DAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
Arabidopsis top hitse value%identityAlignment
AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4.0e-2068.66Show/hide
Query:  FRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN
        F R +TS+P I+ HDAN+L QAIGSIEAIAKASKE IL NTDLS+ KA+ +  FF+DP+FYLSPK N
Subjt:  FRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTTTTCGTAGAGTCATAACTTCTGTACCAGGCATTGATGATCATGATGCAAATTCACTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCCAA
GGAGTACATTTTGGAGAACACAGATCTGTCAGCGGACAAGGCAGAGAGAATTAGGGCCTTTTTCAGGGATCCGAAGTTCTACCTCAGTCCCAAAATAAAT
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTTTTCGTAGAGTCATAACTTCTGTACCAGGCATTGATGATCATGATGCAAATTCACTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCCAA
GGAGTACATTTTGGAGAACACAGATCTGTCAGCGGACAAGGCAGAGAGAATTAGGGCCTTTTTCAGGGATCCGAAGTTCTACCTCAGTCCCAAAATAAAT
Protein sequenceShow/hide protein sequence
MDAFRRVITSVPGIDDHDANSLNQAIGSIEAIAKASKEYILENTDLSADKAERIRAFFRDPKFYLSPKIN