; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003571 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003571
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionQueuine tRNA-ribosyltransferase accessory subunit 2
Genome locationscaffold234:3640071..3640798
RNA-Seq ExpressionMS003571
SyntenyMS003571
Gene Ontology termsGO:0101030 - tRNA-guanine transglycosylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008479 - queuine tRNA-ribosyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002616 - tRNA-guanine(15) transglycosylase-like
IPR036511 - Queuine tRNA-ribosyltransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602735.1 Queuine tRNA-ribosyltransferase accessory subunit 2, partial [Cucurbita argyrosperma subsp. sororia]4.5e-7190.54Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS

XP_022152510.1 queuine tRNA-ribosyltransferase accessory subunit 2-like [Momordica charantia]1.7e-7898.66Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS
        LEIHNTHHYLGFF+SIREAIEAGKFQQYHQKFVEVRRNHLA PALAISS
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS

XP_022964271.1 queuine tRNA-ribosyltransferase accessory subunit 2-like [Cucurbita moschata]4.5e-7190.54Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS

XP_022990656.1 queuine tRNA-ribosyltransferase accessory subunit 2-like [Cucurbita maxima]1.5e-7190.6Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+S
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS

XP_023511781.1 queuine tRNA-ribosyltransferase accessory subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo]9.9e-7190.54Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS

TrEMBL top hitse value%identityAlignment
A0A0A0LSS8 TGT domain-containing protein2.2e-6885.23Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        +E+LQGIAAGVDLFDSAYIYHLT+GGFALTFPL+GIVEK PD HL DN SD+TKINLRA ++RKDTSPILEGC+CYTCLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS
        LEIHNT+HYLGFFQSIREAI+ GKFQQ+HQKFVE RRNHL LP  A+SS
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS

A0A1S3B3I7 Queuine tRNA-ribosyltransferase accessory subunit 25.0e-6886.49Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPL+GIVEK P  HL DN  D+TKINLRAT+YRKDTSPILEGC CYTCLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS
        LEIHNTHHYLGFF+SIREAI+ GKFQQ+HQKFVE RRNHL LP  A+S
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS

A0A6J1DE50 Queuine tRNA-ribosyltransferase accessory subunit 28.2e-7998.66Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS
        LEIHNTHHYLGFF+SIREAIEAGKFQQYHQKFVEVRRNHLA PALAISS
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS

A0A6J1HIG1 Queuine tRNA-ribosyltransferase accessory subunit 22.2e-7190.54Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAIS

A0A6J1JNK0 Queuine tRNA-ribosyltransferase accessory subunit 27.4e-7290.6Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL
        EEILQGIAAGVDLFDSAYIYHLT+GGFALTFPLNGI EK PD HLND+ SD TKINLRATLYRKDTSPILEGC+CY CLNHTKAYINHLLNVHEMLAQIL
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQIL

Query:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS
        LEIHNTHHYLGFF+SIREAI+AGKFQQYHQKFVE RRNHLALPA AI+S
Subjt:  LEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS

SwissProt top hitse value%identityAlignment
B8ZXI1 Queuine tRNA-ribosyltransferase accessory subunit 21.0e-2242.25Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NGIVEKVPDL------HLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL
        +E+L+ I  GVDLF+S + Y +T  G ALTF               NGI EK+  L             ++T  +INL+   Y++D  P++ GC CY C 
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NGIVEKVPDL------HLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL

Query:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIE
        NHT+AYI+HLL  +E+LA +LL +HN  HY GFF SIREA++
Subjt:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIE

Q5R998 Queuine tRNA-ribosyltransferase accessory subunit 24.0e-2238.51Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NG------IVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL
        +E+L+ I  GVDLF+S + Y +T  G ALTF               NG       ++++  +       ++T  +INL+   Y++D +P++ GC CY C 
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NG------IVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL

Query:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQ
        NHT+AYI+HLL  +E+LA +LL +HN  HY GFF  IREA+++ K  Q
Subjt:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQ

Q6DF96 Queuine tRNA-ribosyltransferase accessory subunit 22.6e-2140.54Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTF-------PLNGIVEK--VPDLHLN-DNGSDLT------------KINLRATLYRKDTSPILEGCDCYTC
        +E+L+ I  GVDLFDS + Y +T  G AL F       P   ++EK  + D   N D G+++             +I L+   +R+D  P+LEGC CY C
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTF-------PLNGIVEK--VPDLHLN-DNGSDLT------------KINLRATLYRKDTSPILEGCDCYTC

Query:  LNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQ
         NH++AY++HLL   E+LA ILL IHN  HY  FF SIR A+  G+ +
Subjt:  LNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQ

Q7ZVJ6 Queuine tRNA-ribosyltransferase accessory subunit 23.4e-2134.81Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTF-------------------PLNGIVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL
        +E++  + AGVDLF+S + + +T  G AL+F                     NG   +V     N++  ++T  +INL+   YR D  P++EGC CY C 
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTF-------------------PLNGIVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL

Query:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRR
         H +AY++HLL  +E+LA +LL +HN  HYLGFF+++R+AI + + Q +    +  R+
Subjt:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQYHQKFVEVRR

Q9H974 Queuine tRNA-ribosyltransferase accessory subunit 24.0e-2238.51Show/hide
Query:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NG------IVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL
        +E+L+ I  GVDLF+S + Y +T  G ALTF               NG       ++++  +       ++T  +INL+   Y++D +P++ GC CY C 
Subjt:  EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPL-------------NG------IVEKVPDLHLNDNGSDLT--KINLRATLYRKDTSPILEGCDCYTCL

Query:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQ
        NHT+AYI+HLL  +E+LA +LL +HN  HY GFF  IREA+++ K  Q
Subjt:  NHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFQSIREAIEAGKFQQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGAGATCTTGCAGGGTATTGCTGCTGGAGTCGATCTCTTTGACTCTGCTTACATATATCATTTAACTATTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGT
GGAGAAAGTGCCTGATCTGCACCTTAACGATAATGGAAGTGATCTGACAAAGATCAACCTAAGAGCAACACTTTATCGGAAAGATACATCACCAATCCTTGAGGGCTGTG
ACTGCTATACTTGCCTAAACCATACGAAGGCTTATATAAATCACTTACTAAATGTTCATGAAATGCTGGCTCAGATACTGCTGGAGATTCATAATACTCATCATTATTTA
GGATTCTTTCAATCAATCAGGGAAGCAATCGAAGCAGGCAAATTTCAGCAATATCATCAGAAATTCGTTGAGGTTAGGCGCAATCATCTAGCCTTGCCGGCATTAGCAAT
CAGCTCA
mRNA sequenceShow/hide mRNA sequence
GAGGAGATCTTGCAGGGTATTGCTGCTGGAGTCGATCTCTTTGACTCTGCTTACATATATCATTTAACTATTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGT
GGAGAAAGTGCCTGATCTGCACCTTAACGATAATGGAAGTGATCTGACAAAGATCAACCTAAGAGCAACACTTTATCGGAAAGATACATCACCAATCCTTGAGGGCTGTG
ACTGCTATACTTGCCTAAACCATACGAAGGCTTATATAAATCACTTACTAAATGTTCATGAAATGCTGGCTCAGATACTGCTGGAGATTCATAATACTCATCATTATTTA
GGATTCTTTCAATCAATCAGGGAAGCAATCGAAGCAGGCAAATTTCAGCAATATCATCAGAAATTCGTTGAGGTTAGGCGCAATCATCTAGCCTTGCCGGCATTAGCAAT
CAGCTCA
Protein sequenceShow/hide protein sequence
EEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGSDLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL
GFFQSIREAIEAGKFQQYHQKFVEVRRNHLALPALAISS