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MS003582 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003582
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L18-like
Genome locationscaffold234:3712301..3712507
RNA-Seq ExpressionMS003582
SyntenyMS003582
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152485.1 uncharacterized protein LOC111020202 [Momordica charantia]5.0e-2597.1Show/hide
Query:  TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKV F+
Subjt:  TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

XP_022963861.1 uncharacterized protein LOC111464045 [Cucurbita moschata]1.4e-1470.59Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSS+PS + VRS+LSSQ +S PTTPS+K SSLSW SSFP+IS+S GS  +SSNPAHAKV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

XP_022990182.1 uncharacterized protein LOC111487153 [Cucurbita maxima]1.5e-1370.59Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSS+PS +SVRS+LSSQ +S PTTP +K SSLSW SSFP+IS+S GS  +SSNPAHAKV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

XP_022993255.1 uncharacterized protein LOC111489327 [Cucurbita maxima]4.4e-1369.12Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAF A+SSSLPSCSSV SVLS QW S PT  S+K SSLSW SSFP+++IS GS  +SSNPAH KV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

XP_023521951.1 uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]2.7e-1572.06Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSS+PS +SVRS+LSSQ +S PTTPS+K SSLSW SSFP+IS+S GS  +SSNPAHAKV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

TrEMBL top hitse value%identityAlignment
A0A6J1DE20 uncharacterized protein LOC1110202022.4e-2597.1Show/hide
Query:  TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKV F+
Subjt:  TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

A0A6J1FFK7 uncharacterized protein LOC1114452792.7e-0861.43Show/hide
Query:  MAFTAVSSSL--PSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSSL   S SSV SV+S Q  S P   S+K SSLSW SSFP+++IS GS  +SSNPAH KV F+
Subjt:  MAFTAVSSSL--PSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

A0A6J1HH86 uncharacterized protein LOC1114640456.6e-1570.59Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSS+PS + VRS+LSSQ +S PTTPS+K SSLSW SSFP+IS+S GS  +SSNPAHAKV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

A0A6J1JHY7 uncharacterized protein LOC1114871537.3e-1470.59Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAFTA+SSS+PS +SVRS+LSSQ +S PTTP +K SSLSW SSFP+IS+S GS  +SSNPAHAKV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

A0A6J1JY30 uncharacterized protein LOC1114893272.1e-1369.12Show/hide
Query:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL
        MAF A+SSSLPSCSSV SVLS QW S PT  S+K SSLSW SSFP+++IS GS  +SSNPAH KV F+
Subjt:  MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGATGGCTTTCACAGCAGTATCTTCTTCACTGCCGTCTTGTTCTTCTGTGCGTTCAGTTCTCTCTTCCCAGTGGCTATCAGATCCCACCACTCCATCACGGAAACCCTC
GTCTCTCTCGTGGGTATCTTCATTTCCGAATATTAGCATATCTACAGGCTCGTCTTCCATCTCTTCGAATCCCGCGCATGCAAAGGTACAATTTCTT
mRNA sequenceShow/hide mRNA sequence
ACGATGGCTTTCACAGCAGTATCTTCTTCACTGCCGTCTTGTTCTTCTGTGCGTTCAGTTCTCTCTTCCCAGTGGCTATCAGATCCCACCACTCCATCACGGAAACCCTC
GTCTCTCTCGTGGGTATCTTCATTTCCGAATATTAGCATATCTACAGGCTCGTCTTCCATCTCTTCGAATCCCGCGCATGCAAAGGTACAATTTCTT
Protein sequenceShow/hide protein sequence
TMAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNPAHAKVQFL