CuGenDBv2

Gene ID	MS003587
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH-ubiquinone oxidoreductase chain 3
Genome location	scaffold234:3774131..3774244
RNA-Seq Expression	MS003587
Synteny	MS003587
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022900 - electron transport chain (biological process) GO:0015935 - small ribosomal subunit (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_021685660.1 uncharacterized protein LOC110668638 [Hevea brasiliensis]

1.0e-11

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

XP_023545342.1 uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo]

1.0e-11

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

YP_004237278.1 NADH dehydrogenase subunit 3 [Ricinus communis]

1.0e-11

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

YP_009241665.1 NADH dehydrogenase subunit 3 [Ziziphus jujuba]

1.0e-11

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

YP_009565394.1 NADH dehydrogenase subunit 3 [Morus notabilis]

1.0e-11

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

TrEMBL top hits

e value

%identity

Alignment

A0A142BZ04 NADH-ubiquinone oxidoreductase chain 3

4.9e-12

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

A0A5A7VB34 NADH dehydrogenase subunit 3

4.9e-12

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

A0A7D5XZ34 NADH-ubiquinone oxidoreductase chain 3

4.9e-12

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

A0A7T3QPX1 NADH dehydrogenase subunit 3

4.9e-12

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

E9P2B6 NADH-ubiquinone oxidoreductase chain 3

4.9e-12

94.74

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

SwissProt top hits

e value

%identity

Alignment

P16265 NADH-ubiquinone oxidoreductase chain 3

2.8e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

P18630 NADH-ubiquinone oxidoreductase chain 3

2.8e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

P27062 NADH-ubiquinone oxidoreductase chain 3

8.6e-14

92.11

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILFII DPEVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

P60159 NADH-ubiquinone oxidoreductase chain 3

2.8e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Q96007 NADH-ubiquinone oxidoreductase chain 3

2.8e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

1.5e-13

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILF+I D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

1.7e-04

39.47

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        +++YE G +P GDA  +F IR+Y+ +++F++ D E  F
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

ATMG00990.1 NADH dehydrogenase 3

1.5e-13

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILF+I D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Sequences

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CDS sequence

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ATCGCTGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCAGAAGTAAC
CTTT

mRNA sequence

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ATCGCTGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCAGAAGTAAC
CTTT

Protein sequence

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IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

MS003587 (gene) of Bitter gourd (TR) v1 genome