; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003601 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003601
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionethylene-responsive transcription factor ERF011-like
Genome locationscaffold963:2901..3323
RNA-Seq ExpressionMS003601
SyntenyMS003601
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605215.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4262.07Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+ A       LPAD S + VRKIA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA

Query:  AEVGARVDA--------------------------ALHASADPPRPPS-SSCFSDRVDLNKLPDPEDSDADLTS
        AEVGARVDA                          A   +  P +  S S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AEVGARVDA--------------------------ALHASADPPRPPS-SSCFSDRVDLNKLPDPEDSDADLTS

XP_022947660.1 ethylene-responsive transcription factor ERF011-like [Cucurbita moschata]8.3e-4361.49Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+ A       LPAD S + VRKIA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA

Query:  AEVGARVDA----------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS
        AEVGARVDA                 +H +  P    +           S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AEVGARVDA----------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS

XP_023006973.1 ethylene-responsive transcription factor ERF011-like [Cucurbita maxima]1.4e-4262.43Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG-------LPADSSPAAVRKI
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+AA         PAD S + VRKI
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG-------LPADSSPAAVRKI

Query:  AAEVGARVDA--------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS
        AAEVGARVDA              A      P   P+           S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AAEVGARVDA--------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS

XP_023534076.1 ethylene-responsive transcription factor ERF011-like [Cucurbita pepo subsp. pepo]3.1e-4262.29Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+ A       LPAD S + VRKIA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA

Query:  AEVGARVDAALHA---------SAD--------PPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS
        AEVGARVDA   +         +AD        P   P+           S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AEVGARVDAALHA---------SAD--------PPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS

XP_038900860.1 ethylene-responsive transcription factor ERF008-like [Benincasa hispida]2.3e-4069.8Show/hide
Query:  MKEGN-DEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGA
        MKE N D+K +    K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYD AVFHLRGPSARLNFP FFS        S AAVRKIAAEVGA
Subjt:  MKEGN-DEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGA

Query:  RVDA--------ALHAS--ADPPRPPSSSCFSDRVDLNKLPDPEDSDAD
        RVDA        + H+S      R  SSS FSDRVDLNK PDPEDSD D
Subjt:  RVDA--------ALHAS--ADPPRPPSSSCFSDRVDLNKLPDPEDSDAD

TrEMBL top hitse value%identityAlignment
A0A445G7T6 Ethylene-responsive transcription factor ERF0086.6e-3867.88Show/hide
Query:  KEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARV
        KEG  E         YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P+AAARAYDTAVFHLRGPSARLNFP   +A G  AD S A++RK A EVGARV
Subjt:  KEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARV

Query:  DAALHASADPPRPPSSSCFSDRVDLNKLPDPEDSDAD
        D ALH       P     F+DRVDLNK+P+PE+SD D
Subjt:  DAALHASADPPRPPSSSCFSDRVDLNKLPDPEDSDAD

A0A6J1G7I9 ethylene-responsive transcription factor ERF011-like4.0e-4361.49Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+ A       LPAD S + VRKIA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG------LPADSSPAAVRKIA

Query:  AEVGARVDA----------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS
        AEVGARVDA                 +H +  P    +           S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AEVGARVDA----------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS

A0A6J1L6F3 ethylene-responsive transcription factor ERF011-like6.8e-4362.43Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG-------LPADSSPAAVRKI
        MK G +E+    N KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP FF+AA         PAD S + VRKI
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAG-------LPADSSPAAVRKI

Query:  AAEVGARVDA--------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS
        AAEVGARVDA              A      P   P+           S  FSDRVDLNKLPDPEDSD D  S
Subjt:  AAEVGARVDA--------------ALHASADPPRPPS-----------SSCFSDRVDLNKLPDPEDSDADLTS

A0A7G8AUF0 AP2/ERF transcription factor8.6e-3869.29Show/hide
Query:  NHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASAD
        +H  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSYSSP+AAARAYDTAVFHLRGPSARLNFP +        D S A++RK A EVGARVDAALHAS++
Subjt:  NHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASAD

Query:  P-PRPPSSSCFSDRVDLNKLPDPEDSD
          PR       S++ DLN+ P+PE+SD
Subjt:  P-PRPPSSSCFSDRVDLNKLPDPEDSD

I1MVU7 AP2/ERF domain-containing protein6.6e-3867.88Show/hide
Query:  KEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARV
        KEG  E         YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P+AAARAYDTAVFHLRGPSARLNFP   +A G  AD S A++RK A EVGARV
Subjt:  KEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARV

Query:  DAALHASADPPRPPSSSCFSDRVDLNKLPDPEDSDAD
        D ALH       P     F+DRVDLNK+P+PE+SD D
Subjt:  DAALHASADPPRPPSSSCFSDRVDLNKLPDPEDSDAD

SwissProt top hitse value%identityAlignment
O22174 Ethylene-responsive transcription factor ERF0081.2e-3358.74Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF------SAAGLPADSSPAAVRKIAAEVGARVDA-----
        KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAVF+LRGPSARLNFP         +  G   D S A +R+ AAEVGA+VDA     
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF------SAAGLPADSSPAAVRKIAAEVGARVDA-----

Query:  ALHASADPPRP--------PSSSCFSDRVDLNKLPDPEDSDAD
         ++   +             S +   +RVDLNKLPDPE+SD D
Subjt:  ALHASADPPRP--------PSSSCFSDRVDLNKLPDPEDSDAD

Q8W3M3 Ethylene-responsive transcription factor RAP2-94.0e-3258.09Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF-----SAAGLPADSSPAAVRKIAA
        M E      ++ N K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY + +AAARAYDTAVF+LRGPSARLNFP           GL  D SP  +RK AA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF-----SAAGLPADSSPAAVRKIAA

Query:  EVGARVDAALHASADPPRPPSSSCFSDRVDLNKLPD
        EVGARVDA L            +   + +D+NKLP+
Subjt:  EVGARVDAALHASADPPRPPSSSCFSDRVDLNKLPD

Q9FH94 Ethylene-responsive transcription factor ERF0106.8e-3251.83Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGL-PADSSPAAVRKIAAEVGARVDAALHA------
        +PYKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVF+LRGP+ARLNFP           D S A +RK A EVGA+VDA   A      
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGL-PADSSPAAVRKIAAEVGARVDAALHA------

Query:  ------------------------------SADPPRPPSSSCFSDRVDLNKLPDPEDSDADLTS
                                        D  R  S     DRVDLNKLPDPE SD +  S
Subjt:  ------------------------------SADPPRPPSSSCFSDRVDLNKLPDPEDSDADLTS

Q9SNE1 Ethylene-responsive transcription factor ERF0112.6e-3158.52Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASADPPRP
        +P+KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVF+LRGP+A LNFP          D S A +RK A EVGA+VDA    +      
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASADPPRP

Query:  PSSSCFSDR----------VDLNKLPDPEDSDADL
             FS +          VDLNKLPDPE+ D DL
Subjt:  PSSSCFSDR----------VDLNKLPDPEDSDADL

Q9SW63 Ethylene-responsive transcription factor RAP2-108.9e-3252.07Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLP----------ADSSPAAVRKIAAEVGARVDAA
        KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAVF+LRGPSARLNFP   +   +            D S A +R+ AAEVGA+VDA 
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLP----------ADSSPAAVRKIAAEVGARVDAA

Query:  LHASADPPR------------------------PPSSSCFS-----------DRVDLNKLPDPEDSDAD
          A A   R                             C S           +RVDLNKLPDPE SD D
Subjt:  LHASADPPR------------------------PPSSSCFS-----------DRVDLNKLPDPEDSDAD

Arabidopsis top hitse value%identityAlignment
AT2G23340.1 DREB and EAR motif protein 38.8e-3558.74Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF------SAAGLPADSSPAAVRKIAAEVGARVDA-----
        KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAVF+LRGPSARLNFP         +  G   D S A +R+ AAEVGA+VDA     
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF------SAAGLPADSSPAAVRKIAAEVGARVDA-----

Query:  ALHASADPPRP--------PSSSCFSDRVDLNKLPDPEDSDAD
         ++   +             S +   +RVDLNKLPDPE+SD D
Subjt:  ALHASADPPRP--------PSSSCFSDRVDLNKLPDPEDSDAD

AT3G50260.1 cooperatively regulated by ethylene and jasmonate 11.8e-3258.52Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASADPPRP
        +P+KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVF+LRGP+A LNFP          D S A +RK A EVGA+VDA    +      
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASADPPRP

Query:  PSSSCFSDR----------VDLNKLPDPEDSDADL
             FS +          VDLNKLPDPE+ D DL
Subjt:  PSSSCFSDR----------VDLNKLPDPEDSDADL

AT4G06746.1 related to AP2 92.8e-3358.09Show/hide
Query:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF-----SAAGLPADSSPAAVRKIAA
        M E      ++ N K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY + +AAARAYDTAVF+LRGPSARLNFP           GL  D SP  +RK AA
Subjt:  MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFF-----SAAGLPADSSPAAVRKIAA

Query:  EVGARVDAALHASADPPRPPSSSCFSDRVDLNKLPD
        EVGARVDA L            +   + +D+NKLP+
Subjt:  EVGARVDAALHASADPPRPPSSSCFSDRVDLNKLPD

AT4G36900.1 related to AP2 106.3e-3352.07Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLP----------ADSSPAAVRKIAAEVGARVDAA
        KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAVF+LRGPSARLNFP   +   +            D S A +R+ AAEVGA+VDA 
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLP----------ADSSPAAVRKIAAEVGARVDAA

Query:  LHASADPPR------------------------PPSSSCFS-----------DRVDLNKLPDPEDSDAD
          A A   R                             C S           +RVDLNKLPDPE SD D
Subjt:  LHASADPPR------------------------PPSSSCFS-----------DRVDLNKLPDPEDSDAD

AT5G67190.1 DREB and EAR motif protein 24.9e-3351.83Show/hide
Query:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGL-PADSSPAAVRKIAAEVGARVDAALHA------
        +PYKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVF+LRGP+ARLNFP           D S A +RK A EVGA+VDA   A      
Subjt:  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGL-PADSSPAAVRKIAAEVGARVDAALHA------

Query:  ------------------------------SADPPRPPSSSCFSDRVDLNKLPDPEDSDADLTS
                                        D  R  S     DRVDLNKLPDPE SD +  S
Subjt:  ------------------------------SADPPRPPSSSCFSDRVDLNKLPDPEDSDADLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGGGAAATGATGAGAAAAATATGAATCATAACGGGAAACCGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAATGGGTCGCTGAAATTCGTGAGCCCAATAA
GCGCTCTCGGATTTGGCTCGGCTCCTACTCCTCCCCACTCGCCGCCGCACGCGCCTACGACACCGCCGTCTTCCACCTCCGCGGCCCCTCCGCCCGCCTCAACTTCCCCC
ACTTCTTCTCCGCCGCCGGCCTCCCCGCCGACTCCTCCCCCGCCGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCGTGTCGACGCCGCCCTCCACGCCTCCGCCGAT
CCCCCGCGCCCGCCTTCTTCCTCCTGCTTCTCCGACCGGGTCGACCTCAATAAATTACCCGACCCGGAAGATTCCGACGCCGATCTCACCAGC
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGGGAAATGATGAGAAAAATATGAATCATAACGGGAAACCGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAATGGGTCGCTGAAATTCGTGAGCCCAATAA
GCGCTCTCGGATTTGGCTCGGCTCCTACTCCTCCCCACTCGCCGCCGCACGCGCCTACGACACCGCCGTCTTCCACCTCCGCGGCCCCTCCGCCCGCCTCAACTTCCCCC
ACTTCTTCTCCGCCGCCGGCCTCCCCGCCGACTCCTCCCCCGCCGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCGTGTCGACGCCGCCCTCCACGCCTCCGCCGAT
CCCCCGCGCCCGCCTTCTTCCTCCTGCTTCTCCGACCGGGTCGACCTCAATAAATTACCCGACCCGGAAGATTCCGACGCCGATCTCACCAGC
Protein sequenceShow/hide protein sequence
MKEGNDEKNMNHNGKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPLAAARAYDTAVFHLRGPSARLNFPHFFSAAGLPADSSPAAVRKIAAEVGARVDAALHASAD
PPRPPSSSCFSDRVDLNKLPDPEDSDADLTS