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MS003606 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003606
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold963:29392..29502
RNA-Seq ExpressionMS003606
SyntenyMS003606
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045764.1 hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa]1.0e-0888.89Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
KAG5241053.1 Transmembrane protein [Salix suchowensis]3.0e-0888.89Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWK+KLEEEA AK+T TSSS
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
PNT26302.1 hypothetical protein POPTR_007G006700 [Populus trichocarpa]6.6e-0886.11Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWKKKL+EEA AK+T TSS+
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
PWA39809.1 hypothetical protein CTI12_AA566490 [Artemisia annua]5.1e-0886.11Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IG+VSGKAIFGPP+DEYWKKKLEEE  AKKT TSSS
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
XP_022149438.1 uncharacterized protein LOC111017867 [Momordica charantia]4.9e-11100Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
        IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
TrEMBL top hitse value%identityAlignment
A0A0A0LPX1 Uncharacterized protein4.9e-0988.89Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
A0A2U1KST3 Uncharacterized protein2.4e-0886.11Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IG+VSGKAIFGPP+DEYWKKKLEEE  AKKT TSSS
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
A0A5D3BMY9 Uncharacterized protein4.9e-0988.89Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
A0A6J1D6S8 uncharacterized protein LOC1110178672.4e-11100Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
        IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ
U5GB04 Uncharacterized protein3.2e-0886.11Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
        IGVVSGKAIFGPPLDEYWKKKL+EEA AK+T TSS+
Subjt:  IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65880.1 unknown protein1.2e-0780.65Show/hide
Query:  IGVVSGKAIFGPPLDEYWKKKLE-EEATAKK
        IGVVSGKAIFGPPLD+YWK+KLE EEA   K
Subjt:  IGVVSGKAIFGPPLDEYWKKKLE-EEATAKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGTTGGAAGAAGAGGCAACCGCAAAGAAGACAGGTACCAGTTCAAGTCA
G
mRNA sequenceShow/hide mRNA sequence
ATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGTTGGAAGAAGAGGCAACCGCAAAGAAGACAGGTACCAGTTCAAGTCA
G
Protein sequenceShow/hide protein sequence
IGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQ