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MS003611 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003611
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionisovaleryl-CoA dehydrogenase, mitochondrial
Genome locationscaffold963:75699..75866
RNA-Seq ExpressionMS003611
SyntenyMS003611
Gene Ontology termsGO:0006552 - leucine catabolic process (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0008470 - isovaleryl-CoA dehydrogenase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal
IPR036250 - Acyl-CoA dehydrogenase-like, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605536.1 Isovaleryl-CoA dehydrogenase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1586.54Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLD VL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

XP_008463922.1 PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Cucumis melo]1.0e-1588.46Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

XP_011657216.1 isovaleryl-CoA dehydrogenase, mitochondrial [Cucumis sativus]1.0e-1588.46Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

XP_022140593.1 isovaleryl-CoA dehydrogenase, mitochondrial [Momordica charantia]5.8e-1690.38Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LGIMQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

XP_022957905.1 isovaleryl-CoA dehydrogenase, mitochondrial [Cucurbita moschata]2.9e-1586.54Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLD VL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

TrEMBL top hitse value%identityAlignment
A0A0A0KHQ5 Uncharacterized protein5.2e-1889.29Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQVLSL
        G+YVMMS LDLERLVLAA  LG+MQACLDAVL YVKQREQFGRPIGEFQFIQVLSL
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQVLSL

A0A1S3CKE1 isovaleryl-CoA dehydrogenase, mitochondrial4.8e-1688.46Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

A0A5D3CRA1 Isovaleryl-CoA dehydrogenase4.8e-1688.46Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

A0A6J1CIC1 isovaleryl-CoA dehydrogenase, mitochondrial2.8e-1690.38Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LGIMQACLDAVL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

A0A6J1K1P8 isovaleryl-CoA dehydrogenase, mitochondrial1.4e-1586.54Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  LG+MQACLD VL YVKQREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

SwissProt top hitse value%identityAlignment
Q3SZI8 Isovaleryl-CoA dehydrogenase, mitochondrial3.8e-1061.54Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YV+MS LDLERLVLA   LGIMQA LD  + Y+  RE FG+ IG FQ +Q
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

Q75IM9 Isovaleryl-CoA dehydrogenase, mitochondrial9.4e-1778.85Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YVMMS LDLERLVLAA  +G+MQACLD  + YV+QREQFGRPIGEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

Q9FS87 Isovaleryl-CoA dehydrogenase, mitochondrial3.2e-1780.77Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YV+MS LDLERLVLA+  +GIMQACLD VL YVKQREQFGRPIGEFQF+Q
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

Q9FS88 2-methylacyl-CoA dehydrogenase, mitochondrial4.6e-1676.92Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YV+MS LDLERLVLAA  +GIMQAC+D V+ YV+QREQFGRPIGEFQ IQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

Q9SWG0 Isovaleryl-CoA dehydrogenase, mitochondrial3.2e-1780.77Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YV+MS LDLERLVLAA  LGIMQACLD VL Y++QREQFGRP+GEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ

Arabidopsis top hitse value%identityAlignment
AT3G45300.1 isovaleryl-CoA-dehydrogenase2.3e-1880.77Show/hide
Query:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ
        G+YV+MS LDLERLVLAA  LGIMQACLD VL Y++QREQFGRP+GEFQFIQ
Subjt:  GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCATATATGTAATGATGTCTAGGTTAGATTTGGAGAGACTTGTTTTAGCAGCTGATTCTCTAGGTATTATGCAAGCATGCCTTGATGCTGTTCTTGCTTACGTTAAACA
AAGAGAGCAGTTTGGTCGTCCAATTGGAGAATTCCAGTTTATACAAGTTCTATCACTT
mRNA sequenceShow/hide mRNA sequence
GGCATATATGTAATGATGTCTAGGTTAGATTTGGAGAGACTTGTTTTAGCAGCTGATTCTCTAGGTATTATGCAAGCATGCCTTGATGCTGTTCTTGCTTACGTTAAACA
AAGAGAGCAGTTTGGTCGTCCAATTGGAGAATTCCAGTTTATACAAGTTCTATCACTT
Protein sequenceShow/hide protein sequence
GIYVMMSRLDLERLVLAADSLGIMQACLDAVLAYVKQREQFGRPIGEFQFIQVLSL