; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003620 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003620
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycoside hydrolase, family 43
Genome locationscaffold963:143428..149086
RNA-Seq ExpressionMS003620
SyntenyMS003620
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605231.1 hypothetical protein SDJN03_02548, partial [Cucurbita argyrosperma subsp. sororia]1.8e-8981.36Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+ NGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TS T AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QSVAV+G+DIIA+  RA EKS+ARLEA+EAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

XP_022149444.1 uncharacterized protein LOC111017872 [Momordica charantia]5.5e-11099.1Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASIS+DDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSV RLEAREAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSKH
        KVRGEKWLPSIAREMKLHSKH
Subjt:  KVRGEKWLPSIAREMKLHSKH

XP_022946955.1 uncharacterized protein LOC111450982 [Cucurbita moschata]2.2e-9081.82Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+RNGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TS T AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QSVAV+G+DIIA+  RA EKS+ARLEA+EAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

XP_023007376.1 uncharacterized protein LOC111499889 [Cucurbita maxima]7.5e-9182.27Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+RNGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TSTT AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QSVAV+GRDIIA+  R  EKS+ARLEA+EAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

XP_023532576.1 uncharacterized protein LOC111794698 [Cucurbita pepo subsp. pepo]1.1e-8980.91Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+RNGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TSTT AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QS+A++G+DIIA+  RA EKS+ARLEA+EAAAKAAAK EEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

TrEMBL top hitse value%identityAlignment
A0A0A0LMM8 Uncharacterized protein2.8e-8378.28Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVP-S
        M DRR+  +GGDSSSGEEDGDAQWR+AIDSVA SSVFISSLTNGVP TS    S SD+  E NL A PPKQYQIKA+K+L+NILETTLE+VEH  SVP  
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVP-S

Query:  DDSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAEL
        DDSK+  GGIRLFKNAP+GVVFDHVDEL RPTKRPKI+PGKEINEKSKKFKQ+L+SVAV+G DII ++KR CEKS+ARLEA+EAA KAAAKREE+RVA+L
Subjt:  DDSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAEL

Query:  KKVRGEKWLPSIAREMKLHSK
        KKVRGEKWLPSIAREMKL S+
Subjt:  KKVRGEKWLPSIAREMKLHSK

A0A1S3C6L4 uncharacterized protein LOC1034974294.3e-8478.83Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVP-S
        M DRR+  +GGDSSSGEEDGDA+WRAAIDSV  SSVFISSLTNGVP TS    S  DDD ELNL A PPK YQIKA+K+L+NILETTLE+VEH  SVP  
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVP-S

Query:  DDSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAEL
        DDSK+  GGIRLFKNAP+GVVFDHVDEL RPTK+PKI+PGKEINEKSKKFKQ+L+SVAV+G DII +AKR CEKS+ARLEA+EAA KAAAKREEERVA+L
Subjt:  DDSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAEL

Query:  KKVRGEKWLPSIAREMKLHSKH
        KKVRGEKWLPSIAREMKL S+H
Subjt:  KKVRGEKWLPSIAREMKLHSKH

A0A6J1D727 uncharacterized protein LOC1110178722.7e-11099.1Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASIS+DDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSV RLEAREAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSKH
        KVRGEKWLPSIAREMKLHSKH
Subjt:  KVRGEKWLPSIAREMKLHSKH

A0A6J1G5G9 uncharacterized protein LOC1114509821.1e-9081.82Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+RNGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TS T AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QSVAV+G+DIIA+  RA EKS+ARLEA+EAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

A0A6J1L0C9 uncharacterized protein LOC1114998893.6e-9182.27Show/hide
Query:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD
        M D+RNGGYGGDSSSGEEDGDAQWRAAIDSV T+SVF+SSLTNG+P TSTT AS SDDDSELNL   PPKQYQIKA+K+LENILETTLEVVEH  ++P D
Subjt:  MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSD

Query:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK
        DSK   GGIRLFKNAP+GVVFDH+DEL+RPTK+PKI+PGKEINEKSKKFKQR+QSVAV+GRDIIA+  R  EKS+ARLEA+EAAAKAAAKREEERVAELK
Subjt:  DSKACVGGIRLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELK

Query:  KVRGEKWLPSIAREMKLHSK
        KVRGEKWLPSIAREMKL ++
Subjt:  KVRGEKWLPSIAREMKLHSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49890.1 unknown protein3.1e-4248.34Show/hide
Query:  GGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSDDSKACVGGI
        GGDSSS  ED D +WRAAI+S+AT++V+ +S T         AA+ S +  +  L        QIK + +L  ++E TL+ VE P+++P D  +    G+
Subjt:  GGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSDDSKACVGGI

Query:  RLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELKKVRGEKWLP
        RLFK    G+VFDHVDE+  P K+P + P K +   SK+FK+R++S+AVDG DI+ +A  A +K+ ARL+A+E AAK  AK+EEER+AELKKVRGEKWLP
Subjt:  RLFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELKKVRGEKWLP

Query:  SIAREMKLHSK
        SI R MK   K
Subjt:  SIAREMKLHSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGGAGAAACGGCGGCTATGGCGGCGACAGCAGCAGCGGCGAGGAAGATGGCGACGCCCAATGGAGAGCCGCCATCGATTCCGTTGCTACTTCATCTGTGTT
CATCTCGTCTTTAACTAATGGTGTTCCTCTTACTTCAACGACCGCCGCTTCAATCTCGGACGATGATTCTGAGCTTAATCTCGCTGCTCTGCCGCCCAAGCAATATCAGA
TCAAGGCACGGAAGGTGTTGGAGAATATTTTAGAAACTACTTTAGAGGTGGTAGAACATCCCATTTCTGTCCCTTCTGATGATTCCAAGGCCTGTGTAGGTGGAATTCGT
TTGTTTAAAAATGCTCCCATTGGGGTTGTGTTTGATCACGTGGATGAGCTCGAACGTCCCACAAAGAGACCGAAAATTATCCCCGGGAAAGAAATCAACGAGAAATCGAA
GAAGTTCAAGCAACGGCTCCAATCCGTGGCCGTTGATGGAAGAGACATAATCGCTAGTGCGAAACGTGCATGTGAGAAATCAGTTGCGAGGCTTGAAGCTAGAGAAGCAG
CAGCCAAAGCAGCTGCCAAAAGAGAGGAGGAAAGGGTAGCAGAGCTGAAAAAGGTAAGAGGAGAAAAATGGTTACCATCTATTGCTAGGGAAATGAAGTTACATTCTAAA
CAT
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCGGAGAAACGGCGGCTATGGCGGCGACAGCAGCAGCGGCGAGGAAGATGGCGACGCCCAATGGAGAGCCGCCATCGATTCCGTTGCTACTTCATCTGTGTT
CATCTCGTCTTTAACTAATGGTGTTCCTCTTACTTCAACGACCGCCGCTTCAATCTCGGACGATGATTCTGAGCTTAATCTCGCTGCTCTGCCGCCCAAGCAATATCAGA
TCAAGGCACGGAAGGTGTTGGAGAATATTTTAGAAACTACTTTAGAGGTGGTAGAACATCCCATTTCTGTCCCTTCTGATGATTCCAAGGCCTGTGTAGGTGGAATTCGT
TTGTTTAAAAATGCTCCCATTGGGGTTGTGTTTGATCACGTGGATGAGCTCGAACGTCCCACAAAGAGACCGAAAATTATCCCCGGGAAAGAAATCAACGAGAAATCGAA
GAAGTTCAAGCAACGGCTCCAATCCGTGGCCGTTGATGGAAGAGACATAATCGCTAGTGCGAAACGTGCATGTGAGAAATCAGTTGCGAGGCTTGAAGCTAGAGAAGCAG
CAGCCAAAGCAGCTGCCAAAAGAGAGGAGGAAAGGGTAGCAGAGCTGAAAAAGGTAAGAGGAGAAAAATGGTTACCATCTATTGCTAGGGAAATGAAGTTACATTCTAAA
CAT
Protein sequenceShow/hide protein sequence
MDDRRNGGYGGDSSSGEEDGDAQWRAAIDSVATSSVFISSLTNGVPLTSTTAASISDDDSELNLAALPPKQYQIKARKVLENILETTLEVVEHPISVPSDDSKACVGGIR
LFKNAPIGVVFDHVDELERPTKRPKIIPGKEINEKSKKFKQRLQSVAVDGRDIIASAKRACEKSVARLEAREAAAKAAAKREEERVAELKKVRGEKWLPSIAREMKLHSK
H