; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003625 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003625
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1685)
Genome locationscaffold963:179701..181126
RNA-Seq ExpressionMS003625
SyntenyMS003625
Gene Ontology termsNA
InterPro domainsIPR012881 - Protein of unknown function DUF1685


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605237.1 hypothetical protein SDJN03_02554, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4872.05Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RLS+TLPAL LYHA VNK Y DS
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS---TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS   TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACSVRNSS
Subjt:  VSKS---TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

XP_004149707.1 uncharacterized protein LOC101213862 [Cucumis sativus]9.2e-4869.57Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAW-LRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYD
        S+PY   PPPP +   +P  LY+Q SWSPDASR+EAW  RRKG+SK  R+RS+T EDLE+LKACLELGFGF+SPELD RLS+TLPALGLYHA VNK Y D
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAW-LRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYD

Query:  SVSKST--TSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        S+SKS   T+FSSPDRD+   PSPL SPLA    +GEN +AVKT+LRQWAQVVACSV+NSS
Subjt:  SVSKST--TSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

XP_022947253.1 uncharacterized protein LOC111451175 [Cucurbita moschata]8.3e-4972.5Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RLS+TLPAL LYHA VNK Y DS
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS  TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACSVRNSS
Subjt:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

XP_023007058.1 uncharacterized protein LOC111499661 [Cucurbita maxima]7.1e-4871.25Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RLS+TLPAL LYHA VNK Y +S
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS  TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACS+RNSS
Subjt:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

XP_023521262.1 uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo]1.9e-4871.88Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RL++TLPAL LYHA VNK Y DS
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS  TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACSVRNSS
Subjt:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ4 Uncharacterized protein4.5e-4869.57Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAW-LRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYD
        S+PY   PPPP +   +P  LY+Q SWSPDASR+EAW  RRKG+SK  R+RS+T EDLE+LKACLELGFGF+SPELD RLS+TLPALGLYHA VNK Y D
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAW-LRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYD

Query:  SVSKST--TSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        S+SKS   T+FSSPDRD+   PSPL SPLA    +GEN +AVKT+LRQWAQVVACSV+NSS
Subjt:  SVSKST--TSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

A0A1S3C5W7 uncharacterized protein LOC1034973969.9e-4869.14Show/hide
Query:  SDPYA-YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRR-KGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYY
        S+PY    PPPP +   +P  LY+Q SWSPDASR+EAW RR KG+SK  R+RS+T EDLE+LKACLELGFGF+SPELD RLSDTLPALGLYHA VNK Y 
Subjt:  SDPYA-YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRR-KGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYY

Query:  DSVSK--STTSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        DS+SK  + T+FSSPDRD+   PSPL SPLA    +GEN +AVKT+LRQWAQVVACSV+NSS
Subjt:  DSVSK--STTSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

A0A5A7TQF7 Membrane insertase YidC9.9e-4869.14Show/hide
Query:  SDPYA-YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRR-KGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYY
        S+PY    PPPP +   +P  LY+Q SWSPDASR+EAW RR KG+SK  R+RS+T EDLE+LKACLELGFGF+SPELD RLSDTLPALGLYHA VNK Y 
Subjt:  SDPYA-YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRR-KGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYY

Query:  DSVSK--STTSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        DS+SK  + T+FSSPDRD+   PSPL SPLA    +GEN +AVKT+LRQWAQVVACSV+NSS
Subjt:  DSVSK--STTSFSSPDRDF---PSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

A0A6J1G638 uncharacterized protein LOC1114511754.0e-4972.5Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RLS+TLPAL LYHA VNK Y DS
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS  TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACSVRNSS
Subjt:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

A0A6J1L6N5 uncharacterized protein LOC1114996613.4e-4871.25Show/hide
Query:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS
        S+ YA  PPPPR+P FVP  LYKQRSWSPDASR+EAW R+KG+SK  RSRSVT EDL++LKACLELGF FDS ELD RLS+TLPAL LYHA VNK Y +S
Subjt:  SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS
        +SKS  TT+ SSPDRD    PSPL SPLA    +G+N +AVKT+LRQWAQVVACS+RNSS
Subjt:  VSKS--TTSFSSPDRD---FPSPLASPLA----TGENAEAVKTRLRQWAQVVACSVRNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15590.1 Protein of unknown function (DUF1685)1.7e-2054.55Show/hide
Query:  YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDS
        +AP PPR       PL KQ SWSPD SR+EAWLR+K K       RS+SVT +D+E+LK C ELGFGF  +SP+L+ RLS T+PAL LY A V++QY + 
Subjt:  YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKSTTSFSS
        +S+ T+SF+S
Subjt:  VSKSTTSFSS

AT2G15590.2 Protein of unknown function (DUF1685)2.8e-2646.36Show/hide
Query:  YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDS
        +AP PPR       PL KQ SWSPD SR+EAWLR+K K       RS+SVT +D+E+LK C ELGFGF  +SP+L+ RLS T+PAL LY A V++QY + 
Subjt:  YAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDS

Query:  VSKSTTSFSSPDRDFPSPLASPLATGENAEAVKTRLRQWAQVVACSVRNSS
        +S++++  S  +    + + + +  G++ + +K +L+QWA+VV  SVR+SS
Subjt:  VSKSTTSFSSPDRDFPSPLASPLATGENAEAVKTRLRQWAQVVACSVRNSS

AT3G50350.1 Protein of unknown function (DUF1685)8.7e-2051.45Show/hide
Query:  PYAYAPPPPRR---PPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKS---RRSRSVTEEDLEDLKACLELGFGFDSPE-LDRRLSDTLPALGLYHAVVNK
        P+  +P   RR   PP     L KQ SWSPD  R+EAW +R+  S+    RR +S+T+EDL++LKA  ELGFGF SPE  D RLS+TLPAL LY A V K
Subjt:  PYAYAPPPPRR---PPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKS---RRSRSVTEEDLEDLKACLELGFGFDSPE-LDRRLSDTLPALGLYHAVVNK

Query:  QYYDSVS-KSTTSFSSPDRDFPSPLASPLATGENAEAV
         Y D+VS KSTTS SS      SP  +   T E AEA+
Subjt:  QYYDSVS-KSTTSFSSPDRDFPSPLASPLATGENAEAV

AT3G50350.2 Protein of unknown function (DUF1685)3.3e-2754.07Show/hide
Query:  LYKQRSWSPDASRDEAWLRRKGKSKS---RRSRSVTEEDLEDLKACLELGFGFDSPE-LDRRLSDTLPALGLYHAVVNKQYYDSVS-KSTTSFSSPDRDF
        L  Q SWSPD  R+EAW +R+  S+    RR +S+T+EDL++LKA  ELGFGF SPE  D RLS+TLPAL LY A V K Y D+VS KSTTS SS     
Subjt:  LYKQRSWSPDASRDEAWLRRKGKSKS---RRSRSVTEEDLEDLKACLELGFGFDSPE-LDRRLSDTLPALGLYHAVVNKQYYDSVS-KSTTSFSSPDRDF

Query:  PSPLASPLATGENAEAVKTRLRQWAQVVACSVRNS
         SP  +   T ++ + VKT+L+QWA+VVAC+V  S
Subjt:  PSPLASPLATGENAEAVKTRLRQWAQVVACSVRNS

AT4G33985.1 Protein of unknown function (DUF1685)4.0e-3355.41Show/hide
Query:  RRPPF--VPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDSVSK-
        R  PF   P PL KQ SWSPDA R+EAWLR+KGK    +  RS+SVT+EDLE+LK C+ELGFGF  DSP+LD RLS+TLPALGLY A VNKQY   +S+ 
Subjt:  RRPPF--VPAPLYKQRSWSPDASRDEAWLRRKGK---SKSRRSRSVTEEDLEDLKACLELGFGF--DSPELDRRLSDTLPALGLYHAVVNKQYYDSVSK-

Query:  STTSFSSPDRDFPSPLASPLATGENAEAVKTRLRQWAQVVACSVRNSS
        S+ S  + + +  +   + +  G++ E +K RL+QWAQVVACSV+  S
Subjt:  STTSFSSPDRDFPSPLASPLATGENAEAVKTRLRQWAQVVACSVRNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCGACCCGTACGCCTACGCGCCGCCGCCGCCACGACGGCCGCCGTTCGTGCCGGCGCCTCTGTACAAGCAGCGATCGTGGTCGCCGGACGCGTCCCGTGACGAGGCGTG
GCTGCGGCGGAAAGGGAAGAGCAAGAGCCGCCGGAGCCGGAGCGTGACGGAGGAGGATCTGGAGGATCTGAAGGCCTGTCTCGAGTTGGGATTCGGGTTCGACTCGCCCG
AGTTGGACCGCCGCCTCTCCGATACGCTGCCGGCGTTGGGCCTCTACCACGCCGTCGTCAATAAACAGTATTACGATTCCGTCTCCAAGTCAACGACGTCGTTTTCCTCC
CCCGACCGCGATTTTCCCTCTCCTCTCGCCAGCCCACTCGCCACTGGAGAAAATGCAGAGGCAGTGAAGACAAGGCTGAGACAGTGGGCTCAGGTGGTTGCCTGTTCGGT
GAGAAACTCCTCAAAC
mRNA sequenceShow/hide mRNA sequence
TCCGACCCGTACGCCTACGCGCCGCCGCCGCCACGACGGCCGCCGTTCGTGCCGGCGCCTCTGTACAAGCAGCGATCGTGGTCGCCGGACGCGTCCCGTGACGAGGCGTG
GCTGCGGCGGAAAGGGAAGAGCAAGAGCCGCCGGAGCCGGAGCGTGACGGAGGAGGATCTGGAGGATCTGAAGGCCTGTCTCGAGTTGGGATTCGGGTTCGACTCGCCCG
AGTTGGACCGCCGCCTCTCCGATACGCTGCCGGCGTTGGGCCTCTACCACGCCGTCGTCAATAAACAGTATTACGATTCCGTCTCCAAGTCAACGACGTCGTTTTCCTCC
CCCGACCGCGATTTTCCCTCTCCTCTCGCCAGCCCACTCGCCACTGGAGAAAATGCAGAGGCAGTGAAGACAAGGCTGAGACAGTGGGCTCAGGTGGTTGCCTGTTCGGT
GAGAAACTCCTCAAAC
Protein sequenceShow/hide protein sequence
SDPYAYAPPPPRRPPFVPAPLYKQRSWSPDASRDEAWLRRKGKSKSRRSRSVTEEDLEDLKACLELGFGFDSPELDRRLSDTLPALGLYHAVVNKQYYDSVSKSTTSFSS
PDRDFPSPLASPLATGENAEAVKTRLRQWAQVVACSVRNSSN