; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003633 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003633
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBHLH domain-containing protein
Genome locationscaffold963:314654..315211
RNA-Seq ExpressionMS003633
SyntenyMS003633
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045810.1 transcription factor HEC2-like [Cucumis melo var. makuwa]1.6e-4967.42Show/hide
Query:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL
        P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRIL
Subjt:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL

Query:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL
        QRLVPGGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q  A  ++NNNNNNN   +N+N NN  N+ N++Y+SAL KA  +
Subjt:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL

KAG6605270.1 Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]8.9e-4566.67Show/hide
Query:  FSDFPIPE----QP--PTALQHRHKRC---GGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGG
        FSDF  P     QP  P     + + C   GGGGG M AMREMIFRIAAMQPI IDPE IKAP+RRNVRISKDPQSVAARQRRERISQKIRILQRLVPGG
Subjt:  FSDFPIPE----QP--PTALQHRHKRC---GGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGG

Query:  TKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM
        TKMDTASMLDEAVHYVKFLKRQ+ TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Subjt:  TKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM

KAG7035229.1 Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-4568.57Show/hide
Query:  FSDFPIPE----QPPTA-LQHRHKR--CGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTK
        FSDF  P     QP     Q+R KR   GGGGG M AMREMIFRIAAMQPI IDPE IKAP+RRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTK
Subjt:  FSDFPIPE----QPPTA-LQHRHKR--CGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTK

Query:  MDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM
        MDTASMLDEAVHYVKFLKRQ+ TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Subjt:  MDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM

KGN62005.1 hypothetical protein Csa_006102 [Cucumis sativus]1.7e-4867.43Show/hide
Query:  SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL
        S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRL
Subjt:  SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL

Query:  VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL
        VPGGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q  A  ++NNNNNN     N+N NN  N+ N++Y+SAL KA  +
Subjt:  VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL

XP_023007391.1 transcription factor HEC2-like [Cucurbita maxima]1.4e-4566.86Show/hide
Query:  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDT
        FSDF       EQP     H  ++ GGGGG M AMREMIFRIAAMQPI IDPE IKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDT
Subjt:  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDT

Query:  ASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM
        ASMLDEAVHYVKFLKRQ+ TL+Q      F+N  NN         NNC    N+SYSSAL KA  +   P M
Subjt:  ASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM

TrEMBL top hitse value%identityAlignment
A0A0A0LJI7 BHLH domain-containing protein8.4e-4967.43Show/hide
Query:  SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL
        S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRL
Subjt:  SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL

Query:  VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL
        VPGGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q  A  ++NNNNNN     N+N NN  N+ N++Y+SAL KA  +
Subjt:  VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL

A0A1S4E2F9 transcription factor HEC2-like1.2e-4273.53Show/hide
Query:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL
        P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRIL
Subjt:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL

Query:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQT
        QRLVPGGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q+
Subjt:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQT

A0A5A7TRN4 Transcription factor HEC2-like7.6e-5067.42Show/hide
Query:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL
        P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRIL
Subjt:  PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL

Query:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL
        QRLVPGGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q  A  ++NNNNNNN   +N+N NN  N+ N++Y+SAL KA  +
Subjt:  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL

A0A6J1G7Q1 transcription factor HEC2-like9.6e-4567.04Show/hide
Query:  FSDFPIPE----QPPTA-LQHRHKR------CGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVP
        FSDF  P     QP     Q+R KR       GGGGG M AMREMIFRIAAMQPI IDPE IKAP+RRNVRISKDPQSVAARQRRERISQKIRILQRLVP
Subjt:  FSDFPIPE----QPPTA-LQHRHKR------CGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVP

Query:  GGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM
        GGTKMDTASMLDEAVHYVKFLKRQ+ TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Subjt:  GGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM

A0A6J1L0E1 transcription factor HEC2-like6.7e-4666.86Show/hide
Query:  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDT
        FSDF       EQP     H  ++ GGGGG M AMREMIFRIAAMQPI IDPE IKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDT
Subjt:  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDT

Query:  ASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM
        ASMLDEAVHYVKFLKRQ+ TL+Q      F+N  NN         NNC    N+SYSSAL KA  +   P M
Subjt:  ASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM

SwissProt top hitse value%identityAlignment
O81313 Transcription factor IND4.6e-2869.23Show/hide
Query:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ
        M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+VPGG KMDTASMLDEA+ Y KFLKRQ+  LQ
Subjt:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ

Q8S3D2 Transcription factor bHLH879.6e-2661.96Show/hide
Query:  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ
        ++  M+EMI+R AA +P++   E ++ P+R+NV+IS DPQ+VAARQRRERIS+KIR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q+  L+
Subjt:  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ

Q9FHA7 Transcription factor HEC11.4e-3771.43Show/hide
Query:  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT
        G +M AMREMIFRIA MQPIHIDPEA+K P+RRNVRISKDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A  T
Subjt:  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT

Query:  SFNNNNNNNIIM
                 +++
Subjt:  SFNNNNNNNIIM

Q9LXD8 Transcription factor HEC36.9e-3271.13Show/hide
Query:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT
        +GAM+EM+++IAAMQ + IDP  +K P+RRNVRIS DPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+ YVKFLKRQ+  L      T
Subjt:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT

Q9SND4 Transcription factor HEC21.4e-3767.23Show/hide
Query:  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDE
        +F     P ++L  +   C     +M AMREMIFRIA MQPIHIDPE++K P+R+NVRISKDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDE
Subjt:  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDE

Query:  AVHYVKFLKRQLHTLQQTA
        A+HYVKFLK+Q+ +L++ A
Subjt:  AVHYVKFLKRQLHTLQQTA

Arabidopsis top hitse value%identityAlignment
AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.9e-2761.96Show/hide
Query:  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ
        ++  M+EMI+R AA +P++   E ++ P+R+NV+IS DPQ+VAARQRRERIS+KIR+LQ LVPGGTKMDTASMLDEA +Y+KFL+ Q+  L+
Subjt:  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ

AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.0e-3867.23Show/hide
Query:  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDE
        +F     P ++L  +   C     +M AMREMIFRIA MQPIHIDPE++K P+R+NVRISKDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDE
Subjt:  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDE

Query:  AVHYVKFLKRQLHTLQQTA
        A+HYVKFLK+Q+ +L++ A
Subjt:  AVHYVKFLKRQLHTLQQTA

AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.3e-2969.23Show/hide
Query:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ
        M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+VPGG KMDTASMLDEA+ Y KFLKRQ+  LQ
Subjt:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ

AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-3371.13Show/hide
Query:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT
        +GAM+EM+++IAAMQ + IDP  +K P+RRNVRIS DPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+ YVKFLKRQ+  L      T
Subjt:  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT

AT5G67060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.0e-3871.43Show/hide
Query:  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT
        G +M AMREMIFRIA MQPIHIDPEA+K P+RRNVRISKDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A  T
Subjt:  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT

Query:  SFNNNNNNNIIM
                 +++
Subjt:  SFNNNNNNNIIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCTCGATCTCCGCCTGGGCCCCACCCTCCGGCGCCGCCACGTTCTCCGACTTCCCCATCCCGGAGCAGCCACCCACCGCGCTGCAGCACCGCCACAAACGCTGCGGCGG
CGGCGGCGGCTCGATGGGGGCAATGAGGGAAATGATATTCAGAATCGCGGCGATGCAGCCAATCCACATAGACCCAGAGGCCATAAAGGCGCCGCGGCGGCGGAACGTGC
GGATCTCGAAGGACCCACAGAGCGTGGCGGCACGGCAGCGGCGGGAGAGGATCAGCCAGAAGATTCGGATCCTGCAGCGGCTGGTCCCCGGCGGCACCAAAATGGACACC
GCCTCCATGCTCGACGAAGCCGTCCATTACGTCAAGTTTCTCAAGCGCCAACTTCACACCCTCCAGCAAACGGCCGCTGCGACGTCGTTTAACAACAACAACAACAATAA
TATTATTATGAGTAATCATAATATTAATAATTGTGCCAACAATATTAATATTAGCTATTCATCTGCGCTTTTGAAAGCTTCACACCTCCAATTCCCTCCTCCAATGGCGG
CCAATTCT
mRNA sequenceShow/hide mRNA sequence
CCCTCGATCTCCGCCTGGGCCCCACCCTCCGGCGCCGCCACGTTCTCCGACTTCCCCATCCCGGAGCAGCCACCCACCGCGCTGCAGCACCGCCACAAACGCTGCGGCGG
CGGCGGCGGCTCGATGGGGGCAATGAGGGAAATGATATTCAGAATCGCGGCGATGCAGCCAATCCACATAGACCCAGAGGCCATAAAGGCGCCGCGGCGGCGGAACGTGC
GGATCTCGAAGGACCCACAGAGCGTGGCGGCACGGCAGCGGCGGGAGAGGATCAGCCAGAAGATTCGGATCCTGCAGCGGCTGGTCCCCGGCGGCACCAAAATGGACACC
GCCTCCATGCTCGACGAAGCCGTCCATTACGTCAAGTTTCTCAAGCGCCAACTTCACACCCTCCAGCAAACGGCCGCTGCGACGTCGTTTAACAACAACAACAACAATAA
TATTATTATGAGTAATCATAATATTAATAATTGTGCCAACAATATTAATATTAGCTATTCATCTGCGCTTTTGAAAGCTTCACACCTCCAATTCCCTCCTCCAATGGCGG
CCAATTCT
Protein sequenceShow/hide protein sequence
PSISAWAPPSGAATFSDFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDT
ASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPMAANS