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MS003638 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003638
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPrecursor of CEP6
Genome locationscaffold963:415341..415628
RNA-Seq ExpressionMS003638
SyntenyMS003638
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651918.1 hypothetical protein Csa_006213 [Cucumis sativus]1.4e-0446.25Show/hide
Query:  ISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT
        ++F T Q      +PL SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS    RR+  + A   D    HIT
Subjt:  ISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT

KCW59318.1 hypothetical protein EUGRSUZ_H02001, partial [Eucalyptus grandis]1.8e-0447.69Show/hide
Query:  KEPLPSSTA-QAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT
        KE +PS TA    + LG S  VYKDDFRPT PGSSPGVGH      +   +  A  G++    IT
Subjt:  KEPLPSSTA-QAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT

XP_008457955.1 PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo]3.2e-0653.09Show/hide
Query:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ
        MG Y FQ IC+  ILL L I I+F T Q      +P  SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS Q+
Subjt:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ

XP_011650158.1 precursor of CEP9 [Cucumis sativus]4.5e-0849.5Show/hide
Query:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHI
        MG Y FQ IC+  ILL L I I+F T Q      +PL SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS    RR+  + A   D    HI
Subjt:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHI

Query:  T
        T
Subjt:  T

XP_030462619.1 uncharacterized protein LOC115682517 [Syzygium oleosum]2.3e-0446.15Show/hide
Query:  KEPLPSSTAQ-AGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT
        KE + S TA+   + LG S  VYKDDFRPT PGSSPGVGH      +  +++ A  GD+    +T
Subjt:  KEPLPSSTAQ-AGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT

TrEMBL top hitse value%identityAlignment
A0A059AZM4 Uncharacterized protein (Fragment)8.6e-0547.69Show/hide
Query:  KEPLPSSTA-QAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT
        KE +PS TA    + LG S  VYKDDFRPT PGSSPGVGH      +   +  A  G++    IT
Subjt:  KEPLPSSTA-QAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT

A0A0A0LMN4 Uncharacterized protein2.2e-0849.5Show/hide
Query:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHI
        MG Y FQ IC+  ILL L I I+F T Q      +PL SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS    RR+  + A   D    HI
Subjt:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHI

Query:  T
        T
Subjt:  T

A0A1S3C7Z6 uncharacterized protein LOC1034975201.6e-0653.09Show/hide
Query:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ
        MG Y FQ IC+  ILL L I I+F T Q      +P  SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS Q+
Subjt:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ

A0A5A7TR16 Uncharacterized protein1.6e-0653.09Show/hide
Query:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ
        MG Y FQ IC+  ILL L I I+F T Q      +P  SS   + SSLG     S V  KDDFRPT PG+SPGVGHHS Q+
Subjt:  MGKY-FQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLG----FSAVVYKDDFRPTAPGSSPGVGHHSFQQ

A0A5J5BX94 Uncharacterized protein3.3e-0445.45Show/hide
Query:  ENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT
        E KE  P  T       G S  VYKDDFRPT PG+SPGVG H+F   + +++  A   D A  H T
Subjt:  ENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT

SwissProt top hitse value%identityAlignment
B3H5A9 Precursor of CEP65.4e-0445.9Show/hide
Query:  YIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGH
        YIIL +LFIS  F  +QF+      L  +  Q      F+ V Y DDF PT+PG+SPG+GH
Subjt:  YIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGH

Arabidopsis top hitse value%identityAlignment
AT5G66816.1 unknown protein3.8e-0545.9Show/hide
Query:  YIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGH
        YIIL +LFIS  F  +QF+      L  +  Q      F+ V Y DDF PT+PG+SPG+GH
Subjt:  YIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATATTTTCAAGCCATATGCAAATACATCATTCTTCTTGTACTCTTCATCTCTATCTCCTTTAAAACTCTGCAGTTTTCTCTAGAAAACAAAGAGCCTCTCCC
TTCTTCCACAGCACAAGCTGGCTCCAGCCTCGGCTTCTCGGCTGTCGTTTACAAGGACGATTTTCGACCTACGGCGCCCGGGAGCAGCCCCGGAGTCGGCCACCACTCTT
TTCAGCAGGGAAGGAGAAATATGGAGGTTGTGGCTGCATGGGGTGATCAGGCTCTTCAGCACATAACT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAATATTTTCAAGCCATATGCAAATACATCATTCTTCTTGTACTCTTCATCTCTATCTCCTTTAAAACTCTGCAGTTTTCTCTAGAAAACAAAGAGCCTCTCCC
TTCTTCCACAGCACAAGCTGGCTCCAGCCTCGGCTTCTCGGCTGTCGTTTACAAGGACGATTTTCGACCTACGGCGCCCGGGAGCAGCCCCGGAGTCGGCCACCACTCTT
TTCAGCAGGGAAGGAGAAATATGGAGGTTGTGGCTGCATGGGGTGATCAGGCTCTTCAGCACATAACT
Protein sequenceShow/hide protein sequence
MGKYFQAICKYIILLVLFISISFKTLQFSLENKEPLPSSTAQAGSSLGFSAVVYKDDFRPTAPGSSPGVGHHSFQQGRRNMEVVAAWGDQALQHIT