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MS003641 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003641
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclin-dependent kinase inhibitor family protein
Genome locationscaffold963:461417..461485
RNA-Seq ExpressionMS003641
SyntenyMS003641
Gene Ontology termsGO:0051726 - regulation of cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
GO:0004861 - cyclin-dependent protein serine/threonine kinase inhibitor activity (molecular function)
InterPro domainsIPR003175 - Cyclin-dependent kinase inhibitor domain
IPR044898 - Cyclin-dependent kinase inhibitor domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149452.1 cyclin-dependent kinase inhibitor 7-like isoform X1 [Momordica charantia]1.2e-0495.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
XP_022149453.1 cyclin-dependent kinase inhibitor 7-like isoform X2 [Momordica charantia]1.2e-0495.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
XP_022947965.1 cyclin-dependent kinase inhibitor 7-like [Cucurbita moschata]1.2e-0495.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
XP_023006953.1 cyclin-dependent kinase inhibitor 7-like [Cucurbita maxima]1.2e-0495.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
XP_023532674.1 cyclin-dependent kinase inhibitor 7-like [Cucurbita pepo subsp. pepo]1.2e-0495.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
TrEMBL top hitse value%identityAlignment
A0A068TLS9 CDI domain-containing protein2.3e-0486.96Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIV+DVPLEGRYEW+RLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
A0A6J1D6U1 cyclin-dependent kinase inhibitor 7-like isoform X26.0e-0595.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
A0A6J1D801 cyclin-dependent kinase inhibitor 7-like isoform X16.0e-0595.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
A0A6J1G8D3 cyclin-dependent kinase inhibitor 7-like6.0e-0595.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
A0A6J1L6D4 cyclin-dependent kinase inhibitor 7-like6.0e-0595.65Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIVEDVPLEGRYEWIRLKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
SwissProt top hitse value%identityAlignment
Q67J15 Cyclin-dependent kinase inhibitor 63.4e-0565.22Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIV+D P++GRYEW+R++P
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
Q94CL9 Cyclin-dependent kinase inhibitor 72.6e-0573.91Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIV D PLEGRY+W+ LKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
Q9FKB5 Cyclin-dependent kinase inhibitor 37.5e-0565.22Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YN+DIV D+PL GRYEW+++KP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
Arabidopsis top hitse value%identityAlignment
AT1G49620.1 Cyclin-dependent kinase inhibitor family protein1.8e-0673.91Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YNYDIV D PLEGRY+W+ LKP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
AT3G19150.1 KIP-related protein 63.8e-0471.43Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRL
        +YN+DIV D PLEGRY+W RL
Subjt:  RYNYDIVEDVPLEGRYEWIRL
AT3G24810.1 Cyclin-dependent kinase inhibitor family protein1.3e-0460.87Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YN+DIV D PL GRYEW+++ P
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase5.3e-0665.22Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YN+DIV D+PL GRYEW+++KP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP
AT5G48820.2 inhibitor/interactor with cyclin-dependent kinase5.3e-0665.22Show/hide
Query:  RYNYDIVEDVPLEGRYEWIRLKP
        +YN+DIV D+PL GRYEW+++KP
Subjt:  RYNYDIVEDVPLEGRYEWIRLKP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTACAACTACGACATTGTTGAGGACGTTCCCTTGGAAGGACGTTACGAATGGATTCGATTAAAGCCA
mRNA sequenceShow/hide mRNA sequence
AGGTACAACTACGACATTGTTGAGGACGTTCCCTTGGAAGGACGTTACGAATGGATTCGATTAAAGCCA
Protein sequenceShow/hide protein sequence
RYNYDIVEDVPLEGRYEWIRLKP