; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003643 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003643
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB3 domain-containing protein
Genome locationscaffold963:476743..477437
RNA-Seq ExpressionMS003643
SyntenyMS003643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457833.1 PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo]5.0e-5165Show/hide
Query:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL
        LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSVSNY+MM ADELFFEGRLLP+KDS+         TTLR+EL
Subjt:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL

Query:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF
        L+E+E  D+E+++DD S+RP+   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ NSS QV+NEGG SCKDVEIDF
Subjt:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF

XP_022149537.1 uncharacterized protein LOC111017947 [Momordica charantia]1.5e-10098.93Show/hide
Query:  MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE
        MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE
Subjt:  MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE

Query:  DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF
        DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQ++NEGGPSCKDVEIDF
Subjt:  DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF

XP_022928078.1 uncharacterized protein LOC111434969 [Cucurbita moschata]4.1e-5363.49Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE
        LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNYSMM ADELFFEGRLLPFKDSH         TTLRDELL+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE

Query:  DEDEE-EEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID
        +E+EE EE++D+S+RPS+G WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+NEGG SCKDVEI+
Subjt:  DEDEE-EEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID

XP_022971706.1 uncharacterized protein LOC111470374 [Cucurbita maxima]2.5e-5061.17Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE
        L+MYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNYSMM ADELFFEGRLLPFKDSH         TTLRDELL+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE

Query:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID
         E+E+EE++D+S+RPS+G WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+N G  SCKD+EI+
Subjt:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID

XP_023513000.1 uncharacterized protein LOC111777572 [Cucurbita pepo subsp. pepo]2.6e-5263.3Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE
        LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNYSMM ADELFFEGRLLPFKDSH         TTLRDELL+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE

Query:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID
         E+E+EE++D+S+RPS+G WKGFLGLKKS NA+KK                V+ GKR  GW+ S  T  NSSQV+N GG SCKDVEI+
Subjt:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID

TrEMBL top hitse value%identityAlignment
A0A1S3C600 uncharacterized protein LOC1034974202.4e-5165Show/hide
Query:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL
        LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSVSNY+MM ADELFFEGRLLP+KDS+         TTLR+EL
Subjt:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL

Query:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF
        L+E+E  D+E+++DD S+RP+   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ NSS QV+NEGG SCKDVEIDF
Subjt:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF

A0A5A7TUK7 Uncharacterized protein2.4e-5165Show/hide
Query:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL
        LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSVSNY+MM ADELFFEGRLLP+KDS+         TTLR+EL
Subjt:  LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDEL

Query:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF
        L+E+E  D+E+++DD S+RP+   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ NSS QV+NEGG SCKDVEIDF
Subjt:  LLEDE--DEEEEDDDISRRPSK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPNSS-QVKNEGGPSCKDVEIDF

A0A6J1D890 uncharacterized protein LOC1110179477.4e-10198.93Show/hide
Query:  MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE
        MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE
Subjt:  MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE

Query:  DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF
        DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQ++NEGGPSCKDVEIDF
Subjt:  DEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF

A0A6J1EMU8 uncharacterized protein LOC1114349692.0e-5363.49Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE
        LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNYSMM ADELFFEGRLLPFKDSH         TTLRDELL+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE

Query:  DEDEE-EEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID
        +E+EE EE++D+S+RPS+G WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+NEGG SCKDVEI+
Subjt:  DEDEE-EEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID

A0A6J1I403 uncharacterized protein LOC1114703741.2e-5061.17Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE
        L+MYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNYSMM ADELFFEGRLLPFKDSH         TTLRDELL+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLE

Query:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID
         E+E+EE++D+S+RPS+G WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+N G  SCKD+EI+
Subjt:  DEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05980.1 unknown protein8.3e-0434Show/hide
Query:  PPASPRISFSSDFVDLQQTRTAIPTAATSS--PSPPVSSDFEF----SVSNYSMMPADELFFEGRLLPF-KDSHSHHHPFHRPTTLRDELLLEDEDEEEE
        P   PRISFSSD  D        P              SDFEF    +VS   M+ ADELF EG+LLPF +  HS          L++  L  +E+EE E
Subjt:  PPASPRISFSSDFVDLQQTRTAIPTAATSS--PSPPVSSDFEF----SVSNYSMMPADELFFEGRLLPF-KDSHSHHHPFHRPTTLRDELLLEDEDEEEE

Query:  ------------------------DDDISRRPSKGR--WKGFLGLKKSHN
                                D+D S RP K    WK  L LKK  N
Subjt:  ------------------------DDDISRRPSKGR--WKGFLGLKKSHN

AT3G50640.1 unknown protein2.1e-1539.42Show/hide
Query:  LHHRPPASPRISFSSDFVDLQQTRTAIPT---AATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEE
        +H+    + RISFS++FV+++  ++   +    + SS S P S+DF FSV++YSM+PADE+F +G++LPFK++ SH H      TL +ELL E+E    +
Subjt:  LHHRPPASPRISFSSDFVDLQQTRTAIPT---AATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEE

Query:  DDDISRRP---------SKGRWKGFLGLKKSHNATKK
         +  S RP         +KG W+  LGLK++H  +KK
Subjt:  DDDISRRP---------SKGRWKGFLGLKKSHNATKK

AT4G34419.1 unknown protein2.7e-1040.16Show/hide
Query:  HHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDI
        +H   A PRISFSS F   +        A      P  S DFEF V N+SM  ADE+FF+G +LP K+     +   R +TLR+EL        EED D 
Subjt:  HHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDI

Query:  SRRPSKGR---WKGFLGL-----KKSH
         R  SKG    W+  LGL     KK H
Subjt:  SRRPSKGR---WKGFLGL-----KKSH

AT5G19340.1 unknown protein1.7e-0429.3Show/hide
Query:  PRISFSS---------DFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEE--
        PRISFS+         DF+ +      I        S   + DFEF   N +M+ ADELF EG+LLPF      H    +  TL+ ++ ++ E+E+ +  
Subjt:  PRISFSS---------DFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEE--

Query:  -----------------------------DDDISRRPSKGR--WKGFLGLKKSHNAT
                                     DDD S RP K    WK  L LKK    T
Subjt:  -----------------------------DDDISRRPSKGR--WKGFLGLKKSHNAT

AT5G66800.1 unknown protein1.2e-2143.14Show/hide
Query:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQ----QTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDE
        L+MYNS+        P SPRISFS+DFV+++    +T  + P +     S   S +FEFSVSNY+MMPADELF +G+LLPFK+++          TLR+E
Subjt:  LDMYNSDHKSLHHRPPASPRISFSSDFVDLQ----QTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDE

Query:  LLLEDEDEEEEDD---------------DISRRPSKGRWKGFLGLKKSHNATK
        LL+E+++EE   D                 S   SKGRWKG LGLK++H  +K
Subjt:  LLLEDEDEEEEDD---------------DISRRPSKGRWKGFLGLKKSHNATK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTCCTCCGGCCAGCCCCCGAATCTCCTTCTCCAGCGACTTCGTCGATCTCCAGCAGACCCGAACCGCCAT
CCCCACCGCTGCCACCTCGTCCCCGTCCCCGCCCGTGTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCGATGATGCCCGCCGACGAGCTCTTCTTTGAGGGCCGCC
TTCTCCCCTTCAAGGACTCCCACTCCCACCACCACCCCTTCCATCGGCCCACCACTCTCCGCGACGAGCTTCTTCTCGAGGACGAGGACGAGGAAGAGGAAGACGACGAC
ATCTCCCGCCGCCCCTCCAAGGGCCGGTGGAAGGGCTTCCTCGGCTTGAAAAAGTCCCACAATGCCACCAAGAAGGGCTACCAAAACGACGGCTCAAGTGGCGGCAGTGG
TGGCAGCGACACCGTGGCTGACGGTAAAAGGCCGTTCGGTTGGACCACGTCACATGCCACCAAACCCAATTCATCCCAGGTTAAAAACGAAGGAGGGCCGAGTTGCAAAG
ACGTGGAGATTGATTTC
mRNA sequenceShow/hide mRNA sequence
TTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTCCTCCGGCCAGCCCCCGAATCTCCTTCTCCAGCGACTTCGTCGATCTCCAGCAGACCCGAACCGCCAT
CCCCACCGCTGCCACCTCGTCCCCGTCCCCGCCCGTGTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCGATGATGCCCGCCGACGAGCTCTTCTTTGAGGGCCGCC
TTCTCCCCTTCAAGGACTCCCACTCCCACCACCACCCCTTCCATCGGCCCACCACTCTCCGCGACGAGCTTCTTCTCGAGGACGAGGACGAGGAAGAGGAAGACGACGAC
ATCTCCCGCCGCCCCTCCAAGGGCCGGTGGAAGGGCTTCCTCGGCTTGAAAAAGTCCCACAATGCCACCAAGAAGGGCTACCAAAACGACGGCTCAAGTGGCGGCAGTGG
TGGCAGCGACACCGTGGCTGACGGTAAAAGGCCGTTCGGTTGGACCACGTCACATGCCACCAAACCCAATTCATCCCAGGTTAAAAACGAAGGAGGGCCGAGTTGCAAAG
ACGTGGAGATTGATTTC
Protein sequenceShow/hide protein sequence
LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDD
ISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF