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MS003645 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003645
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like protein 1
Genome locationscaffold963:513412..513807
RNA-Seq ExpressionMS003645
SyntenyMS003645
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605248.1 Calmodulin-like protein 30, partial [Cucurbita argyrosperma subsp. sororia]6.5e-5078.63Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        FDKFD ++DGKISF+EYKAAH AM+G+KEIS+AEAAKSF  VD DGDG+V+LKEFVELY  +GGEV++GDI+SAFKVYDSNGDGKISAEEVMEIMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ST L ACR MVKGVD DGDGFID+ EF+ LM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

XP_022149517.1 calmodulin-like protein 1 [Momordica charantia]8.0e-6496.97Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VFDKFDKDRDGKISF+EYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVM IMK LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ESTNLT CRAMVKGVDGDGDGFIDIKEFAKLM
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

XP_022946935.1 calmodulin-like protein 1 [Cucurbita moschata]1.0e-5079.55Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VFDKFD ++DGKISF+EYKAAH AM+G+KEIS+AEAAKSF  VD DGDG+V+LKEFVELY  +GGEV++GDI+SAFKVYDSNGDGKISAEEVMEIMK LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        EST L ACR MVKGVD DGDGFIDI EF+ LM
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

XP_023007371.1 calmodulin-like protein 1 [Cucurbita maxima]8.5e-5077.1Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        F+KFD ++DGKISF+EYKAAHRAM+G++EIS+ EAAKSF FVD DGDG+V+LKEFVELY  +GGEV++GD++SAFKVYDSNGDG+ISAEEVMEIMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ST L ACR MVKGVD DGDGFIDI EF+ LM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

XP_023532624.1 calmodulin-like protein 1 [Cucurbita pepo subsp. pepo]1.0e-5079.39Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        FDKFD ++DGKISF+EYKAAH AM+G+KEIS+AEAAKSF FVD DGDG+V+LKEFVELY  +GGEV++GD++SAFKVYDSNGDGKISAEEVMEIMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ST L ACR MVKGVD DGDGFIDI EF+ LM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

TrEMBL top hitse value%identityAlignment
A0A1S3C6F1 probable calcium-binding protein CML321.0e-4876.34Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        F+KFD ++DGKISF+EYK AHR +AG+KEI++AEA KSF  VD DGDG+VDLKEFVELY  + GEV+VGDIESAFKVYDSNGDGKISAEEVM IMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        +T L AC+ MVKGVD DGDGFIDI+EF+KLM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

A0A5D3BJJ3 Putative calcium-binding protein CML321.0e-4876.34Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        F+KFD ++DGKISF+EYK AHR +AG+KEI++AEA KSF  VD DGDG+VDLKEFVELY  + GEV+VGDIESAFKVYDSNGDGKISAEEVM IMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        +T L AC+ MVKGVD DGDGFIDI+EF+KLM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

A0A6J1D869 calmodulin-like protein 13.9e-6496.97Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VFDKFDKDRDGKISF+EYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVM IMK LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ESTNLT CRAMVKGVDGDGDGFIDIKEFAKLM
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

A0A6J1G5E9 calmodulin-like protein 14.9e-5179.55Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VFDKFD ++DGKISF+EYKAAH AM+G+KEIS+AEAAKSF  VD DGDG+V+LKEFVELY  +GGEV++GDI+SAFKVYDSNGDGKISAEEVMEIMK LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        EST L ACR MVKGVD DGDGFIDI EF+ LM
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

A0A6J1L0C4 calmodulin-like protein 14.1e-5077.1Show/hide
Query:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE
        F+KFD ++DGKISF+EYKAAHRAM+G++EIS+ EAAKSF FVD DGDG+V+LKEFVELY  +GGEV++GD++SAFKVYDSNGDG+ISAEEVMEIMK LGE
Subjt:  FDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGE

Query:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        ST L ACR MVKGVD DGDGFIDI EF+ LM
Subjt:  STNLTACRAMVKGVDGDGDGFIDIKEFAKLM

SwissProt top hitse value%identityAlignment
P25070 Calcium-binding protein CML243.3e-2042.34Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYAT---NGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEI
        VF +FDK+ DGKIS  E K   RA+  +   S  E        D DG+G++DL EFV L+      GG  R  V D++ AF++YD +G+G+ISA+E+  +
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYAT---NGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEI

Query:  MKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        MK LGE  ++  C+ M+  VD DGDG ++  EF K+M
Subjt:  MKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

Q9C8Y1 Probable calcium-binding protein CML231.9e-2042.03Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEA-AKSFGFVDGDGDGYVDLKEFVELY-----ATNGGEVRVGDIESAFKVYDSNGDGKISAEEVME
        VF +FDK+ DGKIS  E K    A++ N    E +A  K F   D DG+G++DL EFV L+     ++N   +R  D++ AF +YD + +G+ISA E+  
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEA-AKSFGFVDGDGDGYVDLKEFVELY-----ATNGGEVRVGDIESAFKVYDSNGDGKISAEEVME

Query:  IMKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        +MK LGE  ++  C+ M+  VD DGDG +D +EF K+M
Subjt:  IMKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

Q9FYK2 Probable calcium-binding protein CML251.3e-2144.03Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEIMKA
        VF KFD + DGKIS KE  A   ++    E+ E E  K+   +D  GDGY++ +EFVEL  T G +    + +++ AF VYD +G+G ISAEE+ E++++
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEIMKA

Query:  LGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        LG+  ++  CR M+ GVD DGDG ID +EF  +M
Subjt:  LGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

Q9LF55 Probable calcium-binding protein CML325.6e-2040.44Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGD----IESAFKVYDSNGDGKISAEEVMEIM
        +F++ DK++DGKIS+ E+  A RA   +  I+  E    F  +D DGD  +D+ E+       GGE    D    ++ AF +YD +GDGKISA E+  ++
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGD----IESAFKVYDSNGDGKISAEEVMEIM

Query:  KALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        K LGE   +  C AMV+ VD DGDGF+  +EF  +M
Subjt:  KALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

Q9ZQE6 Calmodulin-like protein 307.3e-2848.48Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VF +FD D+DGKIS  EYK   RA+   + I   +  K F  VD DGDG++D +EF++ Y  +GG +R  DI ++F  +D NGDGKISAEEVM ++  LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        E  +L  C  MV+ VD DGDG ++++EF K+M
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family9.5e-2344.03Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEIMKA
        VF KFD + DGKIS KE  A   ++    E+ E E  K+   +D  GDGY++ +EFVEL  T G +    + +++ AF VYD +G+G ISAEE+ E++++
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEIMKA

Query:  LGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        LG+  ++  CR M+ GVD DGDG ID +EF  +M
Subjt:  LGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

AT1G66400.1 calmodulin like 231.4e-2142.03Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEA-AKSFGFVDGDGDGYVDLKEFVELY-----ATNGGEVRVGDIESAFKVYDSNGDGKISAEEVME
        VF +FDK+ DGKIS  E K    A++ N    E +A  K F   D DG+G++DL EFV L+     ++N   +R  D++ AF +YD + +G+ISA E+  
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEA-AKSFGFVDGDGDGYVDLKEFVELY-----ATNGGEVRVGDIESAFKVYDSNGDGKISAEEVME

Query:  IMKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        +MK LGE  ++  C+ M+  VD DGDG +D +EF K+M
Subjt:  IMKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

AT2G15680.1 Calcium-binding EF-hand family protein5.2e-2948.48Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG
        VF +FD D+DGKIS  EYK   RA+   + I   +  K F  VD DGDG++D +EF++ Y  +GG +R  DI ++F  +D NGDGKISAEEVM ++  LG
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALG

Query:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        E  +L  C  MV+ VD DGDG ++++EF K+M
Subjt:  ESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

AT5G17470.1 EF hand calcium-binding protein family4.0e-2140.44Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGD----IESAFKVYDSNGDGKISAEEVMEIM
        +F++ DK++DGKIS+ E+  A RA   +  I+  E    F  +D DGD  +D+ E+       GGE    D    ++ AF +YD +GDGKISA E+  ++
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGD----IESAFKVYDSNGDGKISAEEVMEIM

Query:  KALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        K LGE   +  C AMV+ VD DGDGF+  +EF  +M
Subjt:  KALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM

AT5G37770.1 EF hand calcium-binding protein family2.3e-2142.34Show/hide
Query:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYAT---NGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEI
        VF +FDK+ DGKIS  E K   RA+  +   S  E        D DG+G++DL EFV L+      GG  R  V D++ AF++YD +G+G+ISA+E+  +
Subjt:  VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYAT---NGGEVR--VGDIESAFKVYDSNGDGKISAEEVMEI

Query:  MKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM
        MK LGE  ++  C+ M+  VD DGDG ++  EF K+M
Subjt:  MKALGESTNLTACRAMVKGVDGDGDGFIDIKEFAKLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTTTGACAAGTTCGACAAGGATCGAGATGGGAAGATCTCGTTCAAGGAGTACAAGGCCGCGCATAGAGCCATGGCGGGAAACAAAGAGATCTCGGAAGCCGAAGCTGC
GAAGTCGTTTGGGTTCGTGGACGGGGATGGGGACGGGTATGTGGACTTGAAGGAGTTTGTGGAGCTCTATGCCACGAATGGTGGAGAGGTTCGGGTTGGGGATATCGAGA
GTGCTTTCAAAGTGTACGATTCGAACGGAGACGGGAAGATAAGCGCGGAGGAGGTGATGGAGATCATGAAGGCGCTCGGGGAGAGCACGAACTTGACCGCGTGTAGGGCA
ATGGTGAAGGGTGTGGATGGAGATGGGGATGGCTTCATTGATATCAAGGAGTTTGCAAAGTTGATG
mRNA sequenceShow/hide mRNA sequence
GTGTTTGACAAGTTCGACAAGGATCGAGATGGGAAGATCTCGTTCAAGGAGTACAAGGCCGCGCATAGAGCCATGGCGGGAAACAAAGAGATCTCGGAAGCCGAAGCTGC
GAAGTCGTTTGGGTTCGTGGACGGGGATGGGGACGGGTATGTGGACTTGAAGGAGTTTGTGGAGCTCTATGCCACGAATGGTGGAGAGGTTCGGGTTGGGGATATCGAGA
GTGCTTTCAAAGTGTACGATTCGAACGGAGACGGGAAGATAAGCGCGGAGGAGGTGATGGAGATCATGAAGGCGCTCGGGGAGAGCACGAACTTGACCGCGTGTAGGGCA
ATGGTGAAGGGTGTGGATGGAGATGGGGATGGCTTCATTGATATCAAGGAGTTTGCAAAGTTGATG
Protein sequenceShow/hide protein sequence
VFDKFDKDRDGKISFKEYKAAHRAMAGNKEISEAEAAKSFGFVDGDGDGYVDLKEFVELYATNGGEVRVGDIESAFKVYDSNGDGKISAEEVMEIMKALGESTNLTACRA
MVKGVDGDGDGFIDIKEFAKLM