; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003693 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003693
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description18 kDa seed maturation protein-like
Genome locationscaffold185:381259..382440
RNA-Seq ExpressionMS003693
SyntenyMS003693
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595576.1 18 kDa seed maturation protein, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5076.74Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT
        MQSGKNAMESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKKQ +I EAEL+KQ ARE NAA KQA TA  TH    TTHGTATY T
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT

Query:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG---ATGYGTGGGYS
        T A G+TTG QQMSAVPGHGTGQPTG+VTEGVV +HPIG QTGTG  TTA NP VGGG   AT Y TGGGYS
Subjt:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG---ATGYGTGGGYS

KGN54793.1 hypothetical protein Csa_011934 [Cucumis sativus]3.8e-4774.4Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT
        MQSGK A+ESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKK+ +I EAELNKQ AR+ NAA +QAAT A     GTHP TTH TAT
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT

Query:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG
        Y TT AHG+TTG QQ SA+PGHGTGQPTG VTEGVV +HPIGT+TGTG  TTA NP  GGG TGYGTG
Subjt:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG

XP_022156938.1 18 kDa seed maturation protein-like [Momordica charantia]2.0e-6469.79Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ---AATAAGTHPTTTHGTATYG
        MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ   AATAAGTHPTTTHGTATYG
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ---AATAAGTHPTTTHGTATYG

Query:  TT--------------------------------------------------------------------AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV
        TT                                                                    AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV
Subjt:  TT--------------------------------------------------------------------AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV

Query:  VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS
        VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS
Subjt:  VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS

XP_022924969.1 late embryogenesis abundant protein 46 [Cucurbita moschata]3.6e-5077.19Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT
        MQSGKNAMESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKKQ +I EAEL+KQ ARE NAA KQA TA  TH    TTHGTATY T
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT

Query:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG--ATGYGTGGGYS
        T A G+TTG QQMSAVPGHGTGQPTG+VTEGVV +HPIG QTGTG  TTA NP VGGG  AT Y TGGGYS
Subjt:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG--ATGYGTGGGYS

XP_022966467.1 late embryogenesis abundant protein 46 [Cucurbita maxima]1.4e-4977.06Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT
        MQSGKNAMESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKKQ +I EAEL+KQ AR+ NAA KQA TA  TH    TTHGTATY T
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT

Query:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG-ATGYGTGGGYS
        T A G+TTG QQMSAVPGHGTGQPT RVTEGVV +HPIG QTGTG  TTA NP VGGG AT Y TGGGYS
Subjt:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG-ATGYGTGGGYS

TrEMBL top hitse value%identityAlignment
A0A0A0KZ59 Uncharacterized protein1.8e-4774.4Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT
        MQSGK A+ESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKK+ +I EAELNKQ AR+ NAA +QAAT A     GTHP TTH TAT
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT

Query:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG
        Y TT AHG+TTG QQ SA+PGHGTGQPTG VTEGVV +HPIGT+TGTG  TTA NP  GGG TGYGTG
Subjt:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG

A0A5D3C2B4 18 kDa seed maturation protein2.9e-4572.62Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT
        MQSGK AMES+KESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKK+ +I EAELNKQ AR+ NAA +QAAT       GTHP TTH TAT
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPTTTHGTAT

Query:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG
        + TT AHG+TTG  QMSA+PGHGTGQPTG VTEGVV  HPIGT TGTG  TTA NP + GG TGYGTG
Subjt:  YGTT-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGATGYGTG

A0A6J1DS21 18 kDa seed maturation protein-like9.7e-6569.79Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ---AATAAGTHPTTTHGTATYG
        MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ   AATAAGTHPTTTHGTATYG
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ---AATAAGTHPTTTHGTATYG

Query:  TT--------------------------------------------------------------------AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV
        TT                                                                    AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV
Subjt:  TT--------------------------------------------------------------------AHGHTTGAQQMSAVPGHGTGQPTGRVTEGV

Query:  VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS
        VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS
Subjt:  VESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS

A0A6J1EAR4 late embryogenesis abundant protein 461.8e-5077.19Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT
        MQSGKNAMESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKKQ +I EAEL+KQ ARE NAA KQA TA  TH    TTHGTATY T
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT

Query:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG--ATGYGTGGGYS
        T A G+TTG QQMSAVPGHGTGQPTG+VTEGVV +HPIG QTGTG  TTA NP VGGG  AT Y TGGGYS
Subjt:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG--ATGYGTGGGYS

A0A6J1HN24 late embryogenesis abundant protein 466.7e-5077.06Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT
        MQSGKNAMESMKESAANVAASA++GM+KTKATVQEKMEK+TA  P+AKE+AEEKKQ +I EAEL+KQ AR+ NAA KQA TA  TH    TTHGTATY T
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTH--PTTTHGTATYGT

Query:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG-ATGYGTGGGYS
        T A G+TTG QQMSAVPGHGTGQPT RVTEGVV +HPIG QTGTG  TTA NP VGGG AT Y TGGGYS
Subjt:  T-AHGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGG-ATGYGTGGGYS

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1133.7e-0537.66Show/hide
Query:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATY--GTTAHGHTT
        M+SMK++    AASA++GMEK KA++QEK+++M    P  KEMA E+K+ER  +AEL KQ AR  NA A       G    T + TA Y  G T     T
Subjt:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATY--GTTAHGHTT

Query:  GAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTGTTARNPRVGGGATGYGT
        G       P  G+G  TGR  +         T+   GTT         +   GT
Subjt:  GAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTGTTARNPRVGGGATGYGT

P46515 11 kDa late embryogenesis abundant protein1.5e-1760.75Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ-AATAAGTHPTTTHGTATYGTT
        MQSGKNA  S KE+AANVAASA++GMEKTKA++QEK EKMTA  P+ KEMA EKK+ER  EAE  KQ A+E NAA KQ      GTH  TT       T 
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQ-AATAAGTHPTTTHGTATYGTT

Query:  AHGHTTG
          GH TG
Subjt:  AHGHTTG

Q00747 Protein LE256.5e-1047.62Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTA
        MQ+GK+A           A++A++GMEKTKA VQEK E+MT   P+ KEMA EKK++R+  AE+ K+ A+ Q+AA KQ A   GT      GT  YG T 
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTA

Query:  HGHTT
        + HTT
Subjt:  HGHTT

Q01417 18 kDa seed maturation protein6.9e-3660.47Show/hide
Query:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPT-TTHGTA
        MQ GK A ES+KE+A N+ ASA++GMEKTKATVQEK E+MTA  P+ KE+A +KK+ ++ +AEL+KQ AR+ N AAKQ+AT A     G H T T  GTA
Subjt:  MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAA-----GTHPT-TTHGTA

Query:  TYGTTA-HGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGAT--GYGTGG
        TY TT  +G   GA Q SA+PGHGTGQPTG VTEGVV SHPIGT  G G   TA N R GG     GYGTGG
Subjt:  TYGTTA-HGHTTGAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG--TTARNPRVGGGAT--GYGTGG

Q9FG31 Late embryogenesis abundant protein 461.0e-3158.75Show/hide
Query:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTAH-GHTTG
        M+SMKE+A+N+AASA+SGM+KTKAT++EK EKM    P+ K+MA + K+++I +AE+ K+  R+ NAA K+AA  AGT      GTAT+ TT   GH TG
Subjt:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTAH-GHTTG

Query:  AQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG-TTARNPRV-GGGATGYGTGGGYS
          QMSA+PGHGTGQ T RV EG   + PIG  TGTG TTA N  V GGGATGYGTGGGY+
Subjt:  AQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG-TTARNPRV-GGGATGYGTGGGYS

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-57.4e-3358.75Show/hide
Query:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTAH-GHTTG
        M+SMKE+A+N+AASA+SGM+KTKAT++EK EKM    P+ K+MA + K+++I +AE+ K+  R+ NAA K+AA  AGT      GTAT+ TT   GH TG
Subjt:  MESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTAH-GHTTG

Query:  AQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG-TTARNPRV-GGGATGYGTGGGYS
          QMSA+PGHGTGQ T RV EG   + PIG  TGTG TTA N  V GGGATGYGTGGGY+
Subjt:  AQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTG-TTARNPRV-GGGATGYGTGGGYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGGGAAAAAACGCAATGGAATCGATGAAGGAATCGGCTGCCAACGTGGCAGCCTCAGCAAGATCTGGCATGGAGAAGACCAAAGCCACTGTCCAAGAG
AAGATGGAGAAGATGACGGCGGAGGGCCCTATTGCTAAAGAAATGGCAGAAGAGAAGAAACAGGAGAGGATTCGGGAGGCGGAGCTTAACAAACAGATGGCGCGT
GAGCAAAACGCCGCTGCGAAACAGGCCGCGACGGCCGCTGGCACACATCCGACCACCACCCACGGGACGGCGACATACGGCACCACCGCTCATGGCCATACCACG
GGAGCCCAGCAGATGTCGGCCGTGCCCGGTCACGGTACCGGGCAGCCCACGGGCCGAGTGACGGAAGGCGTGGTGGAGTCGCACCCTATTGGAACTCAGACCGGC
ACCGGGACGACGGCCCGCAACCCGCGCGTGGGCGGCGGTGCAACCGGTTACGGCACCGGCGGCGGATATAGT
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGGGAAAAAACGCAATGGAATCGATGAAGGAATCGGCTGCCAACGTGGCAGCCTCAGCAAGATCTGGCATGGAGAAGACCAAAGCCACTGTCCAAGAG
AAGATGGAGAAGATGACGGCGGAGGGCCCTATTGCTAAAGAAATGGCAGAAGAGAAGAAACAGGAGAGGATTCGGGAGGCGGAGCTTAACAAACAGATGGCGCGT
GAGCAAAACGCCGCTGCGAAACAGGCCGCGACGGCCGCTGGCACACATCCGACCACCACCCACGGGACGGCGACATACGGCACCACCGCTCATGGCCATACCACG
GGAGCCCAGCAGATGTCGGCCGTGCCCGGTCACGGTACCGGGCAGCCCACGGGCCGAGTGACGGAAGGCGTGGTGGAGTCGCACCCTATTGGAACTCAGACCGGC
ACCGGGACGACGGCCCGCAACCCGCGCGTGGGCGGCGGTGCAACCGGTTACGGCACCGGCGGCGGATATAGT
Protein sequenceShow/hide protein sequence
MQSGKNAMESMKESAANVAASARSGMEKTKATVQEKMEKMTAEGPIAKEMAEEKKQERIREAELNKQMAREQNAAAKQAATAAGTHPTTTHGTATYGTTAHGHTT
GAQQMSAVPGHGTGQPTGRVTEGVVESHPIGTQTGTGTTARNPRVGGGATGYGTGGGYS