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MS003696 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003696
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationscaffold185:443420..443503
RNA-Seq ExpressionMS003696
SyntenyMS003696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QOE56474.1 RNA polymerase beta subunit [Zelkova serrata]2.0e-0485.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
QUA06842.1 RNA polymerase beta subunit [Cotoneaster argenteus]2.0e-0485.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
QWX20281.1 RNA polymerase beta subunit [Hippophae neurocarpa]2.0e-0485.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
YP_009992976.1 RNA polymerase beta subunit [Hovenia acerba]2.0e-0485.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
YP_010160110.1 RNA polymerase beta subunit [Trophis caucana]2.0e-0485.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
TrEMBL top hitse value%identityAlignment
A0A1P8J722 DNA-directed RNA polymerase subunit beta9.5e-0585.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
A0A1V0INB1 DNA-directed RNA polymerase subunit beta9.5e-0585.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
A0A1V0J717 DNA-directed RNA polymerase subunit beta9.5e-0585.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
A0A218KG28 DNA-directed RNA polymerase subunit beta9.5e-0585.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
A0A6H0ETN6 DNA-directed RNA polymerase subunit beta9.5e-0585.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
SwissProt top hitse value%identityAlignment
A4QJA7 DNA-directed RNA polymerase subunit beta1.3e-0682.14Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTI WE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
A4QJJ1 DNA-directed RNA polymerase subunit beta1.3e-0682.14Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTI WE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
P50546 DNA-directed RNA polymerase subunit beta1.3e-0682.14Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTI WE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
Q09X25 DNA-directed RNA polymerase subunit beta2.6e-0785.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
Q4VZP1 DNA-directed RNA polymerase subunit beta2.6e-0785.71Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTIEWE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL
Arabidopsis top hitse value%identityAlignment
ATCG00190.1 RNA polymerase subunit beta9.1e-0882.14Show/hide
Query:  EFLTIEWETVHLRSIFPFKYFSIGASFL
        EFLTI WE VHLRSIFPF+YFSIGAS +
Subjt:  EFLTIEWETVHLRSIFPFKYFSIGASFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATTCTTGACTATTGAATGGGAAACAGTTCATCTTCGAAGTATTTTTCCCTTCAAATATTTTTCTATTGGAGCCTCATTTCTT
mRNA sequenceShow/hide mRNA sequence
GAATTCTTGACTATTGAATGGGAAACAGTTCATCTTCGAAGTATTTTTCCCTTCAAATATTTTTCTATTGGAGCCTCATTTCTT
Protein sequenceShow/hide protein sequence
EFLTIEWETVHLRSIFPFKYFSIGASFL