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MS003697 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003697
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationscaffold185:443984..444089
RNA-Seq ExpressionMS003697
SyntenyMS003697
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QOE56474.1 RNA polymerase beta subunit [Zelkova serrata]3.0e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
QUA06842.1 RNA polymerase beta subunit [Cotoneaster argenteus]3.0e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
QWX20281.1 RNA polymerase beta subunit [Hippophae neurocarpa]3.0e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
YP_009718789.1 RNA polymerase beta subunit [Chaenomeles sinensis]3.0e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
YP_010160110.1 RNA polymerase beta subunit [Trophis caucana]3.0e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
TrEMBL top hitse value%identityAlignment
A0A1P8J722 DNA-directed RNA polymerase subunit beta1.5e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
A0A1V0INB1 DNA-directed RNA polymerase subunit beta1.5e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
A0A1V0J717 DNA-directed RNA polymerase subunit beta1.5e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
A0A218KG28 DNA-directed RNA polymerase subunit beta1.5e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
A0A6H0ETN6 DNA-directed RNA polymerase subunit beta1.5e-0785.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
SwissProt top hitse value%identityAlignment
A6MM28 DNA-directed RNA polymerase subunit beta2.0e-0982.86Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTI W+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
Q09MI6 DNA-directed RNA polymerase subunit beta2.0e-0982.86Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTI W+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
Q09X25 DNA-directed RNA polymerase subunit beta3.9e-1085.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
Q4VZP1 DNA-directed RNA polymerase subunit beta3.9e-1085.71Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTIEW+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
Q8S8X9 DNA-directed RNA polymerase subunit beta2.0e-0982.86Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTI W+QVHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
Arabidopsis top hitse value%identityAlignment
ATCG00190.1 RNA polymerase subunit beta3.1e-1080Show/hide
Query:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN
        Q+FLTI W++VHL+SIFPF YFS GASLIPFIEHN
Subjt:  QQFLTIEWKQVHLQSIFPF-YFSTGASLIPFIEHN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAACAATTCTTGACTATTGAATGGAAACAAGTTCATCTTCAAAGTATTTTCCCATTCTATTTTTCTACTGGAGCTTCCCTCATTCCTTTTATAGAACATAAT
mRNA sequenceShow/hide mRNA sequence
CAACAATTCTTGACTATTGAATGGAAACAAGTTCATCTTCAAAGTATTTTCCCATTCTATTTTTCTACTGGAGCTTCCCTCATTCCTTTTATAGAACATAAT
Protein sequenceShow/hide protein sequence
QQFLTIEWKQVHLQSIFPFYFSTGASLIPFIEHN