CuGenDBv2

Gene ID	MS003700
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold185:562692..562844
RNA-Seq Expression	MS003700
Synteny	MS003700
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

QNN85384.1 ATP synthase CF1 alpha subunit [Camellia sinensis]

6.7e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

YP_009236266.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum]

6.7e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

YP_009336022.1 ATP synthase CF1 alpha subunit [Ulmus davidiana]

6.7e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

YP_009488497.1 ATP synthase CF1 alpha subunit [Ulmus gaussenii]

6.7e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

YP_009752735.1 CF1 subunit alpha [Cyclantheropsis parviflora]

6.7e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

TrEMBL top hits

e value

%identity

Alignment

A0A075TQ03 ATP synthase subunit alpha

3.3e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A0A075TQN1 ATP synthase subunit alpha, chloroplastic

3.3e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A0A109WWJ5 ATP synthase subunit alpha, chloroplastic

3.3e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A0A1L5YE57 ATP synthase subunit alpha, chloroplastic

3.3e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A0A649UJL1 ATP synthase subunit alpha, chloroplastic

3.3e-19

98.04

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSSPLGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

SwissProt top hits

e value

%identity

Alignment

A0A320 ATP synthase subunit alpha, chloroplastic

9.7e-21

96.08

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A6MM21 ATP synthase subunit alpha, chloroplastic

9.7e-21

96.08

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

A6MMS9 ATP synthase subunit alpha, chloroplastic

9.7e-21

96.08

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

Q0ZJ35 ATP synthase subunit alpha, chloroplastic

7.5e-21

96.08

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

Q70XV0 ATP synthase subunit alpha, chloroplastic

9.7e-21

96.08

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DDPSKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAKSSS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

3.0e-17

82.35

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DD SKQA AYRQMSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G G
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

ATCG00120.1 ATP synthase subunit alpha

3.8e-20

92.16

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DD SKQAQAYRQMSLLLRRPPGREAY GDVFYLHSRLLERAAK SS LGEG
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

ATMG01190.1 ATP synthase subunit 1

3.0e-17

82.35

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Query:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG
        DD SKQA AYRQMSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G G
Subjt:  DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

Sequences

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CDS sequence

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GATGATCCCTCCAAACAAGCACAAGCTTATCGACAAATGTCTCTTCTTTTACGAAGACCACCGGGCCGTGAAGCTTATCAGGGGGATGTTTTTTATTTGCATTCA
CGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCCTTTAGGTGAAGGA

mRNA sequence

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GATGATCCCTCCAAACAAGCACAAGCTTATCGACAAATGTCTCTTCTTTTACGAAGACCACCGGGCCGTGAAGCTTATCAGGGGGATGTTTTTTATTTGCATTCA
CGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCCTTTAGGTGAAGGA

Protein sequence

Show/hide protein sequence

DDPSKQAQAYRQMSLLLRRPPGREAYQGDVFYLHSRLLERAAKSSSPLGEG

MS003700 (gene) of Bitter gourd (TR) v1 genome