CuGenDBv2

Gene ID	MS003738
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Epidermal patterning factor-like protein
Genome location	scaffold127:102486..102749
RNA-Seq Expression	MS003738
Synteny	MS003738
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022145029.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Momordica charantia]

1.9e-45

100

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

8.0e-28

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

1.8e-27

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

8.0e-28

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-27

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CU06 Epidermal patterning factor-like protein

9.2e-46

100

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1EZ19 Epidermal patterning factor-like protein

8.6e-28

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

3.9e-28

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1I4N2 Epidermal patterning factor-like protein

4.0e-25

67.82

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQR K  G   N    V    +N+EA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1I8G8 Epidermal patterning factor-like protein

4.0e-25

65.91

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        ++G   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQR K  G   N    V    +N+EA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

SwissProt top hits

e value

%identity

Alignment

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

1.4e-06

32.5

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Query:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        KE V+GS PP C  KC NC+PC+  L  I   H +  D                       + YY + W C+C+D+ F+P
Subjt:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

1.4e-06

32.1

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Query:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        E +  +GS PP C N+C NC PC+A  V +   +     +N +S     P ++L  T L +  +Y  + WKC C   ++ P
Subjt:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 2

2.0e-05

32.47

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Query:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +IGSRPP+C   +C +C  C A  V +    +    L  S++      +L+ TR     +Y  +SWKCKC +  + P
Subjt:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

9.8e-08

32.5

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Query:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        KE V+GS PP C  KC NC+PC+  L  I   H +  D                       + YY + W C+C+D+ F+P
Subjt:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

AT4G37810.1 unknown protein

1.4e-06

32.47

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Query:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +IGSRPP+C   +C +C  C A  V +    +    L  S++      +L+ TR     +Y  +SWKCKC +  + P
Subjt:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

AT5G10310.1 unknown protein

9.8e-08

32.1

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Query:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        E +  +GS PP C N+C NC PC+A  V +   +     +N +S     P ++L  T L +  +Y  + WKC C   ++ P
Subjt:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Sequences

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CDS sequence

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CTCTCAGGTGTGGGTTATTCAAAGGAGAAGGAATTGGTAATTGGGTCAAGGCCACCACAGTGCTTCAACAAGTGCCTGAATTGCAGGCCATGTGTTGCTGCTTTGGTCAT
CTCTCAGCGCCATAAGGAATCAGGTGATGGTCTTAATTATAGTGCTGCTGTTCCTATTCCTAATGCTAATTTGGAAGCCACTAGACTCCCCAGGGATGATTCCTATTATC
TCCTCTCATGGAAATGCAAATGTAAAGATAAGTACTTTCAGCCT

mRNA sequence

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Protein sequence

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LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

MS003738 (gene) of Bitter gourd (TR) v1 genome