CuGenDBv2

Gene ID	MS003741
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosomal protein
Genome location	scaffold127:117760..118700
RNA-Seq Expression	MS003741
Synteny	MS003741
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000473 - Ribosomal protein L36 IPR035977 - Ribosomal protein L36 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150587.2 uncharacterized protein LOC101223220 [Cucumis sativus]

1.3e-42

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFAS+GPSP LFSR+EVKQEILPS S RTGLASLIPQK+EPT   GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

XP_022144930.1 uncharacterized protein LOC111014487 [Momordica charantia]

3.2e-49

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFAS+GPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

XP_022933442.1 uncharacterized protein LOC111440855 [Cucurbita moschata]

2.9e-42

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLSTFAS+ PSP LFSRSEVKQEILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

XP_022987917.1 uncharacterized protein LOC111485318 [Cucurbita maxima]

7.7e-43

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST AS+GPSP LF  SEVKQEILPS+S RTGLASL+PQKHEPT +FGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

XP_038879717.1 uncharacterized protein LOC120071478 [Benincasa hispida]

5.9e-43

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFAS+GP P LFSRSEVKQE+LPS+S RTGLASLIPQKHEPT + GWRMGLASILLKK N
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8W2 Ribosomal protein

1.2e-41

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFA +GPSP LFSR+EVKQEILPS   R GLASLIPQK+EPT + GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

A0A6J1CT08 Ribosomal protein

1.6e-49

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFAS+GPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

A0A6J1EZS5 Ribosomal protein

1.4e-42

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLSTFAS+ PSP LFSRSEVKQEILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

A0A6J1I4R0 Ribosomal protein

4.1e-42

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTV+RRGRVY+YCSSNPKHKQRQGLSTFAS+ PSP LFSRSEVK++ILPS+S RTGLASLIPQKHEPT +FGWRMGLASIL KK N
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

A0A6J1JBN8 Ribosomal protein

3.7e-43

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST AS+GPSP LF  SEVKQEILPS+S RTGLASL+PQKHEPT +FGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

SwissProt top hits

e value

%identity

Alignment

A5VLI2 50S ribosomal protein L36

6.8e-10

78.95

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

B2G8V5 50S ribosomal protein L36

6.8e-10

78.95

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

B3WAJ5 50S ribosomal protein L36

8.9e-10

73.68

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

P73300 50S ribosomal protein L36

4.0e-10

76.32

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MKVR+SVKKMC+ CR ++RRGRV V CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

Q035A6 50S ribosomal protein L36

8.9e-10

73.68

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

Arabidopsis top hits

e value

%identity

Alignment

AT5G20180.1 Ribosomal protein L36

6.1e-30

65.05

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSP-PLFSRSEVKQEI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLK
        MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA +G +P PLF+     QE+  LP      GLASL+ ++  PT  FGWR GLASIL K
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSP-PLFSRSEVKQEI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLK

Query:  KHN
        + N
Subjt:  KHN

AT5G20180.2 Ribosomal protein L36

6.1e-30

65.05

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSP-PLFSRSEVKQEI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLK
        MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA +G +P PLF+     QE+  LP      GLASL+ ++  PT  FGWR GLASIL K
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSP-PLFSRSEVKQEI--LPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLK

Query:  KHN
        + N
Subjt:  KHN

ATCG00760.1 ribosomal protein L36

1.3e-08

65.79

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Query:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG
        MK+R+SV+K+CE CR ++RRGR+ V C SNP+HKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG

Sequences

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CDS sequence

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ATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGTGAATTCTGTAGGACAGTAAAGCGCCGGGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCA
AGGCCTATCAACATTTGCAAGTGATGGCCCTTCTCCTCCCTTGTTCTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTTATAGCCCGCGAACAGGGCTGGCTTCTC
TCATCCCCCAAAAGCACGAGCCAACTACAATGTTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAAT

mRNA sequence

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Protein sequence

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MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASDGPSPPLFSRSEVKQEILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN

MS003741 (gene) of Bitter gourd (TR) v1 genome