CuGenDBv2

Gene ID	MS003759
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	scaffold127:232716..238121
RNA-Seq Expression	MS003759
Synteny	MS003759
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0e+00

91.1

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K EKEFTNDDEYIKETNSLLR+VHHAIF EQVVFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS QSCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCITIEGEG+PNVVGL  GNSK+IY  NRY CDLADLPVIILLQVASQIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        D QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_022145057.1 mediator of RNA polymerase II transcription subunit 17 [Momordica charantia]

0.0e+00

98.94

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE EFTNDDEYIKETNSLLREVHHAIFSEQ VFDLVNRE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSS+SCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVNDDCITIEGEG+PNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVA QIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_023005226.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

91.72

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLP+KRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSSCDPSS
        DA+TVAGMTRPK LPNE LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFD+SSCDPSS
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSSCDPSS

Query:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNR
        VFRPSSSTIRV+HD SGML INLP NSCHS+RFGFLSGCNVEN LE G NESTNS+NQSS K EKEFTNDD YIKETNSLLRE HHAIFSEQ VFDLVNR
Subjt:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNR

Query:  EAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVK
        EAFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSSQSCQ+VDGANT+ILDNTNLPFDSLDGIELPDR D LEKKLRNPNHI+FEIYLQQIFH LVFVK
Subjt:  EAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVK

Query:  SNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTK
        SNDR ISA SRQ +Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP SI+HP  IQARTSD HQM NVTK
Subjt:  SNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTK

Query:  SQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP
        SQFQTKVVVND+CITIEGEG+PNVV L K NSK+IYSMNRYGCDLADLPVIILLQVASQI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDP
Subjt:  SQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP

Query:  EDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        EDAQGCLSWWLVMDD LM+DRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFG  L
Subjt:  EDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_023516123.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]

0.0e+00

91.7

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVD DSSGMLAI+LP NSCHS+RFGFLSGCN+ENPLERGKNESTNSSNQS I+ EKEFTNDDEYIKETNSLLR+VHHAIFSEQ VFDLVNRE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSVFISLVP+ QSCQ V+ AN  ILDNTNLPFDSLDGIELPDRSD LEKKLRNPN+ +FEIYLQQIFHELVF++S
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        ND+PIS+LSRQ  QPSNDGSGLLGHFCLSLAHRIFAN VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP+S +HP  IQARTSD HQMK+VTKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVNDDCITIEGEG+P+VVGL KGNSK++YSMNRYGCDLADLPVIILLQVASQIILWLH EALTWGIK +RDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        DAQGCLSWWLVMDD LMEDRK NFDISDVVPEYRKFLG+LSLEVL STLMDLVSLCSGFGG L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0e+00

91.55

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRV+HDSSGMLAINLP NSCHS+RFGFLSGCNVENPLERGKNESTNSSNQSSI  EKEFTNDDEYIKETNSLLR+VHHAIFSEQ VFDLVNRE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSV ISLVPS QSCQ V+GANT ILDN NLPFDSLDGIELPDRSD  EKKLRNPNHI+FEIYLQQIFHELVFV+S
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRP SALSRQ  Q +NDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQA TSD HQM N+TKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCITIEGEG+PNVVGL  GNSK+I+SMNRYGCDLADLPVIILLQVASQIILWLH EALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        D QGCLSWWLVMDD LMED+KL+FD SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSG G  L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.95

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K EKEFTNDDEYIKETNSLLR+VHHAIF EQ VFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS QSCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCITIEGEG+PNVVGL  GNSK+IY  NRY CDLADLPVIILLQVASQIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        D QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

91.1

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K EKEFTNDDEYIKETNSLLR+VHHAIF EQVVFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS QSCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCITIEGEG+PNVVGL  GNSK+IY  NRY CDLADLPVIILLQVASQIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        D QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.95

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K EKEFTNDDEYIKETNSLLR+VHHAIF EQ VFDLVN E
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS QSCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCITIEGEG+PNVVGL  GNSK+IY  NRY CDLADLPVIILLQVASQIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        D QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

98.94

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE
        FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE EFTNDDEYIKETNSLLREVHHAIFSEQ VFDLVNRE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSS+SCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHI+FEIYLQQIFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVNDDCITIEGEG+PNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVA QIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A6J1KUD0 mediator of RNA polymerase II transcription subunit 17-like

0.0e+00

91.72

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLP+KRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSSCDPSS
        DA+TVAGMTRPK LPNE LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFD+SSCDPSS
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSSCDPSS

Query:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNR
        VFRPSSSTIRV+HD SGML INLP NSCHS+RFGFLSGCNVEN LE G NESTNS+NQSS K EKEFTNDD YIKETNSLLRE HHAIFSEQ VFDLVNR
Subjt:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNR

Query:  EAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVK
        EAFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSSQSCQ+VDGANT+ILDNTNLPFDSLDGIELPDR D LEKKLRNPNHI+FEIYLQQIFH LVFVK
Subjt:  EAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVK

Query:  SNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTK
        SNDR ISA SRQ +Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP SI+HP  IQARTSD HQM NVTK
Subjt:  SNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTK

Query:  SQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP
        SQFQTKVVVND+CITIEGEG+PNVV L K NSK+IYSMNRYGCDLADLPVIILLQVASQI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDP
Subjt:  SQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP

Query:  EDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        EDAQGCLSWWLVMDD LM+DRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFG  L
Subjt:  EDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

7.8e-211

58.79

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLV
        S FRPS+ STIRVDHDS+GMLAIN+P +S +S+RFG++    + N  E  ++  + + +      EK   +DD+Y+KET+SLLREVH +IF+EQ +FD++
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLV

Query:  NREAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVF
        NREAFN  +G N++G+REN++++SI Q  S+F+SL PS ++  I      K  ++  L  +S   +E  +  D   KKL  PN  S+EIYLQQIFHE  F
Subjt:  NREAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVF

Query:  VKSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKN
         K+ D+  S   R  +Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP L LISHPTWNSR SSWT FM VP SI+     + ++ D    K 
Subjt:  VKSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKN

Query:  VTKSQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAH
          K+QF+TKVVV DDCI++E E +PNVVGL K +S N++S+N+Y CD+ADLPV+IL QVASQI+ WL  EA T G KA+R+FLSLS E+ +GE + LVAH
Subjt:  VTKSQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAH

Query:  VDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC
        V+PEDA+GC+SWWLVM++   E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  VDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

5.5e-212

58.79

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLV
        S FRPS+ STIRVDHDS+GMLAIN+P +S +S+RFG++    + N  E  ++  + + +      EK   +DD+Y+KET+SLLREVH +IF+EQ +FD++
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLV

Query:  NREAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVF
        NREAFN  +G N++G+REN++++SI Q  S+F+SL PS ++  I      K  ++  L  +S   +E  +  D   KKL  PN  S+EIYLQQIFHE  F
Subjt:  NREAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVF

Query:  VKSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKN
         K+ D+  S   R  +Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP L LISHPTWNSR SSWT FM VP SI+     + ++ D    K 
Subjt:  VKSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKN

Query:  VTKSQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAH
          K+QF+TKVVV DDCI++E E +PNVVGL K +S N++S+N+Y CD+ADLPV+IL QVASQI+ WL  EA T G KA+R+FLSLS E+ +GE + LVAH
Subjt:  VTKSQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAH

Query:  VDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC
        V+PEDA+GC+SWWLVM++   E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  VDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAACGGCCTCGAACGATTCCCATCAGATGTAGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATTGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACGCCGTGGCCATGGC
AGAATATGATAGAAAACTTGCAGCTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACTAGG
CCGAAACCATTACCAAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTGCAATGCTTTCGACATCTTGGCAAATATTTCAAGCAGTCAGCTAAAGGTTT
GGAACGCCAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTCTAATTAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCCCCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCCTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTCGATCATGATTCATCTGGAATGCTGGCTATT
AATTTACCTTCAAATTCTTGCCACTCCATCCGTTTTGGATTTCTCAGTGGATGTAATGTGGAGAATCCTCTGGAACGTGGTAAAAATGAGTCCACAAATTCATCCAATCA
GTCTTCAATCAAAGGTGAGAAGGAGTTTACAAATGACGATGAATACATTAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTAGTGT
TTGATTTGGTGAATCGCGAAGCATTCAATCCATCCTTGGGTATCAATGTCACTGGAATACGAGAAAATTACTTGCAATTAAGTATAGATCAGAGTACCTCGGTCTTCATC
TCTCTCGTGCCATCTAGTCAAAGTTGCCAAATAGTTGATGGTGCCAATACCAAGATTTTGGATAATACAAATTTACCTTTTGATTCACTTGATGGGATTGAATTACCAGA
TAGAAGTGACTCCCTTGAAAAGAAGTTGCGGAATCCTAATCATATAAGTTTTGAAATATATCTGCAGCAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGAC
CCATTTCTGCATTAAGCCGCCAATTAAGTCAACCTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTTGCCCACAGGATATTTGCAAACAGTGTTCTT
ATGGAGCTCGAAAATGTGGTCTGGAAGGTCCCATGTCTTCAATTAATTTCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACCTTCTTCATGGAAGTTCCCCGGTC
CATTGTTCATCCTAATGGCATCCAAGCTCGTACATCAGACCGTCATCAGATGAAGAATGTAACCAAATCACAATTTCAGACTAAAGTGGTGGTAAATGATGATTGTATCA
CAATTGAAGGGGAAGGTTCTCCTAATGTCGTTGGCCTGTGCAAGGGAAATTCCAAGAATATCTACTCAATGAACAGATATGGCTGCGACTTGGCTGATCTTCCTGTGATA
ATTCTGTTGCAGGTTGCTAGCCAAATTATTCTTTGGCTTCATGGGGAAGCTCTAACCTGGGGAATAAAGGCAAACCGCGACTTCCTAAGTCTATCCTTTGAGTTAGAACA
GGGCGAAACACTCCGTCTTGTAGCCCATGTCGACCCAGAAGATGCTCAAGGCTGCCTTTCCTGGTGGTTGGTCATGGACGATGACCTGATGGAGGACAGGAAACTTAATT
TTGACATTTCAGATGTTGTACCTGAATACAGGAAGTTCTTGGGGTATTTATCACTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGCTTGTGCAGTGGATTTGGG
GGTGGCCTA

mRNA sequence

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Protein sequence

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MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAI
NLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEKEFTNDDEYIKETNSLLREVHHAIFSEQVVFDLVNREAFNPSLGINVTGIRENYLQLSIDQSTSVFI
SLVPSSQSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHISFEIYLQQIFHELVFVKSNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVL
MELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQFQTKVVVNDDCITIEGEGSPNVVGLCKGNSKNIYSMNRYGCDLADLPVI
ILLQVASQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFG
GGL

MS003759 (gene) of Bitter gourd (TR) v1 genome