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MS003771 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003771
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold127:318286..318531
RNA-Seq ExpressionMS003771
SyntenyMS003771
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]3.6e-2274.39Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR
        M+RSSST+RSFDE SVD+   SISSPPLK+EAS  LPLFKSNS +K+EM L FKSP G NAVH+IPL L +CALILWVCSTR
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]1.4e-2174.07Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCST
        M+RSSST+RSF+E SVD+   SISSPPLK+EASG LPLFKSNS +K+EM   FKSP GENAVH+IPL L +CALILWVCST
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCST

KAF3967602.1 hypothetical protein CMV_008418 [Castanea mollissima]2.8e-1151.85Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKS-NSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        MHRSSST+R+ DE  V++   ++ SPPLK   S  LP++ S + T+K+++ L+ KS  GENA+HIIPLVL++C LILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKS-NSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1665.06Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR
        MHRSSST+R+FDE SVDM     SSPPLK+EA    LPLFK + T K+EM  HFK P G+NAVH+IPL+LL+ ALILW+CS+R
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1665.06Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR
        MHRSSST+R+FDE SVDM     SSPPLK+EA    LPLFK + T K+EM  HFK P G+NAVH+IPL+LL+ ALILW+CS+R
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR

TrEMBL top hitse value%identityAlignment
A0A067KJC2 Uncharacterized protein2.4e-1156.79Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNS-TSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        MHRSSST+R+ DELSV+ +       P+K  +S  LP++KS+S  SK+E+ LH KS  GENAVH+IPL+LL+CALILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNS-TSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

A0A0A0LTP3 Uncharacterized protein1.0e-2274.39Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR
        M+RSSST+RSF+E SVD+   SISSPPLK+EASG LPLFKSNS +K+EM   FKSP GENAVH+IPL L +CALILWVCSTR
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR

A0A438EIF2 Uncharacterized protein5.2e-1150.62Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKS-NSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        M+RS+ST+R+ DE  V++  A++ S PLK  AS  LP++   +  +K+EM +H KS  GENA+H+IPL+L++CALILWV S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKS-NSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

A0A5A7TZH0 Uncharacterized protein1.7e-2274.39Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR
        M+RSSST+RSFDE SVD+   SISSPPLK+EAS  LPLFKSNS +K+EM L FKSP G NAVH+IPL L +CALILWVCSTR
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR

M5VTC7 Uncharacterized protein1.2e-1051.72Show/hide
Query:  MHRSSSTARSFDELSVDMTLASI---SSPPLKD-EASGHLPLFKSNS---TSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        MHRSSST+R+ +E  V+   AS+   SSPPLK   AS +LP++ +NS   T K    LH KS GGEN +H+IPLVL++C  ILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASI---SSPPLKD-EASGHLPLFKSNS---TSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein2.3e-0637.65Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        M RS+S +   D+LS +    S S P +K  A        LP +  NS   ++ +  F+S   ENA+H IP+VL++CA+ILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

AT2G35658.2 unknown protein2.3e-0637.65Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        M RS+S +   D+LS +    S S P +K  A        LP +  NS   ++ +  F+S   ENA+H IP+VL++CA+ILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

AT2G35658.3 unknown protein2.3e-0637.65Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        M RS+S +   D+LS +    S S P +K  A        LP +  NS   ++ +  F+S   ENA+H IP+VL++CA+ILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGH-----LPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

AT4G16840.1 unknown protein3.6e-0433.33Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPP-------LKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS
        M RS+S +R  D        A+  SPP       ++D+    LP +  NS + +  +  F+    EN +H+IPL+LL+C  ILW+ S
Subjt:  MHRSSSTARSFDELSVDMTLASISSPP-------LKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCS

AT5G20045.1 unknown protein2.8e-0430.95Show/hide
Query:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELH---FKSPGGENAVHIIPLVLLVCALILWVCST
        M R   ++R  +E  +++++ S S             L   +  +K+E+ LH   +KS  GE A+H+IP+VL +C  +LWV S+
Subjt:  MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELH---FKSPGGENAVHIIPLVLLVCALILWVCST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGGTCTTCAAGCACGGCTCGGAGCTTCGACGAGCTCTCGGTTGACATGACACTGGCTTCGATCAGCTCCCCACCATTGAAGGATGAAGCTTCTGGTCATTTGCC
GCTGTTTAAGAGTAATAGTACCTCCAAGAGAGAAATGGAGTTGCATTTTAAATCTCCAGGAGGAGAAAACGCAGTTCACATAATCCCTCTTGTTCTCCTTGTTTGTGCTC
TAATCCTTTGGGTTTGTTCAACCAGG
mRNA sequenceShow/hide mRNA sequence
ATGCACAGGTCTTCAAGCACGGCTCGGAGCTTCGACGAGCTCTCGGTTGACATGACACTGGCTTCGATCAGCTCCCCACCATTGAAGGATGAAGCTTCTGGTCATTTGCC
GCTGTTTAAGAGTAATAGTACCTCCAAGAGAGAAATGGAGTTGCATTTTAAATCTCCAGGAGGAGAAAACGCAGTTCACATAATCCCTCTTGTTCTCCTTGTTTGTGCTC
TAATCCTTTGGGTTTGTTCAACCAGG
Protein sequenceShow/hide protein sequence
MHRSSSTARSFDELSVDMTLASISSPPLKDEASGHLPLFKSNSTSKREMELHFKSPGGENAVHIIPLVLLVCALILWVCSTR