; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003776 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003776
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold127:354838..355209
RNA-Seq ExpressionMS003776
SyntenyMS003776
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4173.64Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRT-AASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT
        MAT+L TF P  IRACA+     +D NRR+T ++SSSSNWW PVFGWSSEPDYIDSG+    K LA G SKSDPE KSA  RFSPGCFTE+KARQLR+MT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRT-AASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKTRADS
         ETESFHDVMYHSAIASRLA+DFK+RADS
Subjt:  TETESFHDVMYHSAIASRLASDFKTRADS

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]2.4e-4681.25Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT
        MATNLLTF PAGIRACA+  DRRSD +RR+T  SSSSNWW PVFGWSSEPDYIDSG+K     LAGGSSK D E KS   RFSPGCFTEAKARQLRMMTT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT

Query:  ETESFHDVMYHSAIASRLASDFKTRADS
        ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  ETESFHDVMYHSAIASRLASDFKTRADS

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]1.7e-4478.29Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT
        MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWW PVFGWSSEPDYIDS +     + LAG +SK D E KS   RFSPGCFTEAKARQLRMMT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKTRADS
        TETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TETESFHDVMYHSAIASRLASDFKTRADS

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]3.4e-4071.54Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMM
        MATNL TF P  IRACA+     +D NRR+  +++SSSSNWW PVFGWSSEPDYIDSG+    K LA G SKSDPE KS+  RFSPGCFTE+KARQLR+M
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMM

Query:  TTETESFHDVMYHSAIASRLASDFKTRADS
        T ETESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  TTETESFHDVMYHSAIASRLASDFKTRADS

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]3.1e-4984.38Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT
        MATNLLTF PAGIRACAA  DRRSD NRR+T  SSSSNWW PVFGWSSEPDYIDS +K    +LAGG SKSDPE KS   RFSPGCFTEAKARQLRMMTT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT

Query:  ETESFHDVMYHSAIASRLASDFKTRADS
        ETESFHDVMYHSAIASRLASDFKTRADS
Subjt:  ETESFHDVMYHSAIASRLASDFKTRADS

TrEMBL top hitse value%identityAlignment
A0A0A0LTN7 Uncharacterized protein1.2e-4681.25Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT
        MATNLLTF PAGIRACA+  DRRSD +RR+T  SSSSNWW PVFGWSSEPDYIDSG+K     LAGGSSK D E KS   RFSPGCFTEAKARQLRMMTT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSK----ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT

Query:  ETESFHDVMYHSAIASRLASDFKTRADS
        ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  ETESFHDVMYHSAIASRLASDFKTRADS

A0A1S4E4Y4 uncharacterized protein LOC1035027478.4e-4578.29Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT
        MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWW PVFGWSSEPDYIDS +     + LAG +SK D E KS   RFSPGCFTEAKARQLRMMT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKTRADS
        TETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TETESFHDVMYHSAIASRLASDFKTRADS

A0A5D3CSV6 Uncharacterized protein8.4e-4578.29Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT
        MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWW PVFGWSSEPDYIDS +     + LAG +SK D E KS   RFSPGCFTEAKARQLRMMT
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGS-----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKTRADS
        TETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TETESFHDVMYHSAIASRLASDFKTRADS

A0A6J1HBD8 uncharacterized protein LOC1114613081.6e-4071.54Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMM
        MATNL TF P  IRACA+     +D NRR+  +++SSSSNWW PVFGWSSEPDYIDSG+    K LA G SKSDPE KS+  RFSPGCFTE+KARQLR+M
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWTPVFGWSSEPDYIDSGS----KELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMM

Query:  TTETESFHDVMYHSAIASRLASDFKTRADS
        T ETESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  TTETESFHDVMYHSAIASRLASDFKTRADS

A0A6J1JBM9 uncharacterized protein LOC1114853098.1e-4072.66Show/hide
Query:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKE----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT
        MATNL TF P  IRACA+     +D NRR+T +SSSSNWW PVFGWSSEPDYIDS +K      A G SKSDPE KSA  RFSPGCFTE+KARQLR+MT 
Subjt:  MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKE----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTT

Query:  ETESFHDVMYHSAIASRLASDFKTRADS
        ETESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  ETESFHDVMYHSAIASRLASDFKTRADS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein9.2e-2047.75Show/hide
Query:  IRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIAS
        IRA +  G    DQNR+++AA     WW P+FG  S+PDY++  S        K+D     +  +F  GCFTE KA+QLR  T E  +FHDVMYHSAIAS
Subjt:  IRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIAS

Query:  RLASDFKTRAD
        RLASD   R +
Subjt:  RLASDFKTRAD

AT3G15630.1 unknown protein3.1e-1543.36Show/hide
Query:  AGIRACAAPGDRR--SDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHS
        A I +C+A    R  S+ +  R    SS +WW P+FG SSEPDY++         +   + +   A  R    C TE KA+QLR  T E  +FHDVMYHS
Subjt:  AGIRACAAPGDRR--SDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHS

Query:  AIASRLASDFKTR
        AIASRLASD + +
Subjt:  AIASRLASDFKTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTAATCTCCTCACTTTCCACCCCGCCGGCATCCGTGCATGTGCCGCTCCCGGCGACCGACGCTCCGACCAGAATCGCCGGAGAACCGCCGCCTCCTCATCCTC
GAACTGGTGGACCCCGGTCTTCGGCTGGTCCTCCGAGCCCGACTACATCGACTCCGGCAGCAAGGAGCTCGCCGGCGGGAGCTCAAAATCAGATCCGGAACCGAAATCGG
CGAGTACTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCGCGGCAGCTCCGGATGATGACGACCGAAACGGAGTCGTTTCACGATGTCATGTACCACTCGGCGATC
GCATCCCGCCTCGCGTCGGACTTCAAAACTCGCGCCGATTCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTAATCTCCTCACTTTCCACCCCGCCGGCATCCGTGCATGTGCCGCTCCCGGCGACCGACGCTCCGACCAGAATCGCCGGAGAACCGCCGCCTCCTCATCCTC
GAACTGGTGGACCCCGGTCTTCGGCTGGTCCTCCGAGCCCGACTACATCGACTCCGGCAGCAAGGAGCTCGCCGGCGGGAGCTCAAAATCAGATCCGGAACCGAAATCGG
CGAGTACTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCGCGGCAGCTCCGGATGATGACGACCGAAACGGAGTCGTTTCACGATGTCATGTACCACTCGGCGATC
GCATCCCGCCTCGCGTCGGACTTCAAAACTCGCGCCGATTCC
Protein sequenceShow/hide protein sequence
MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWTPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAI
ASRLASDFKTRADS