; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003799 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003799
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF538
Genome locationscaffold127:625191..625649
RNA-Seq ExpressionMS003799
SyntenyMS003799
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023568.1 hypothetical protein SDJN02_14594 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-7390.2Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSALVSLSTQ+TDS DL  PPSSAHARLANYGFPFGLLPS+V SYTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVG+ITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

XP_004148715.1 uncharacterized protein LOC101218800 [Cucumis sativus]8.3e-7390.2Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSAL+SLSTQ+ DSK+L IPPSSAHARLA+YGFPFGLLPS+V SYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVGLITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

XP_022144910.1 uncharacterized protein LOC111014474 [Momordica charantia]1.6e-79100Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

XP_022961236.1 uncharacterized protein LOC111461806 [Cucurbita moschata]9.8e-7490.85Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSALVSLSTQ+TDS DLK PPSSAHARLANYGFPFGLLPS+V SYTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVG+ITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

XP_023515647.1 uncharacterized protein LOC111779757 [Cucurbita pepo subsp. pepo]2.4e-7289.54Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSALVSLSTQ+TDS DLK PPSSAHARLANYGFPFGLLPS+V SYTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAK RIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        +GIRVRALFQWWSITGIRS+G+DLVFEVG+ITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

TrEMBL top hitse value%identityAlignment
A0A0A0LTW9 Uncharacterized protein4.0e-7390.2Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSAL+SLSTQ+ DSK+L IPPSSAHARLA+YGFPFGLLPS+V SYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVGLITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

A0A5D3BM00 Uncharacterized protein9.9e-7288.24Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSAL+ LSTQ+ DSK+L IPPSSAHARLA+YGFPFGLLPS+V +YTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVGLITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

A0A6J1CSY8 uncharacterized protein LOC1110144747.6e-80100Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

A0A6J1H9T4 uncharacterized protein LOC1114618064.8e-7490.85Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSALVSLSTQ+TDS DLK PPSSAHARLANYGFPFGLLPS+V SYTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVG+ITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

A0A6J1JBL6 uncharacterized protein LOC1114852984.8e-7490.85Show/hide
Query:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL
        MKSIF+LF+FSALVSLSTQ+TDS DLK PPSSAHARLANYGFPFGLLPS+V SYTIN+TSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L
Subjt:  MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSL

Query:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        DGIRVRALFQWWSITGIRS+G+DLVFEVG+ITAKYPSKSFNESP CEGRRS+S
Subjt:  DGIRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02813.1 Protein of unknown function, DUF5382.1e-1836.11Show/hide
Query:  SIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDG
        SIFI+F    L+ LST  + S   K    S +  L NY  P G+LP  V  Y +N  +G F +    +C+F++  D+Y   +  V++G I +GR+  L G
Subjt:  SIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDG

Query:  IRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC
        + V+ LF W +I+ +   GDD+ F VG  + ++ SK F +SP C
Subjt:  IRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC

AT1G02816.1 Protein of unknown function, DUF5387.4e-1934.72Show/hide
Query:  SIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDG
        SIF  F+F     L     D     IP  +A+  L +Y FP G+LP  VVSY ++ ++G F      SC F L   +Y   +   ++G I++ +I  L G
Subjt:  SIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDG

Query:  IRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC
        ++V+ LF W +I  +  +GD+L F VG+ +A +    F ESP C
Subjt:  IRVRALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC

AT4G02360.1 Protein of unknown function, DUF5381.3e-1834.78Show/hide
Query:  SAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWWSITGIRSSGDDLVFEVGLI
        +A+  +  Y  P G+LP  VV Y +N  +G+F +   D+C+FT+   +Y   +   ++G I+ G + +L G+ V+ LF W +I  +   G DL F VG+ 
Subjt:  SAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWWSITGIRSSGDDLVFEVGLI

Query:  TAKYPSKSFNESPAC
        +A +P+ +F ESP C
Subjt:  TAKYPSKSFNESPAC

AT4G02370.1 Protein of unknown function, DUF5383.3e-1932.84Show/hide
Query:  LVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWW
        L SL+     + +   P  +A++ L +Y FP G+LP  VV+Y ++ T+G F     DSC F L   +Y  ++   ++G I++ ++  L G++V+ LF W 
Subjt:  LVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWW

Query:  SITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC
        +I  +  +GD++ F VG+ +A +  + F ESP C
Subjt:  SITGIRSSGDDLVFEVGLITAKYPSKSFNESPAC

AT5G19590.1 Protein of unknown function, DUF5387.8e-4560.54Show/hide
Query:  LFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVR
        LF+ S L+ L     D       P+ AHA L N+GFP GLLP SV  Y +N TSGDFSL L  +CK TLPPDNY+A++S  VTG+I++G+I  L GIRVR
Subjt:  LFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVR

Query:  ALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS
        A F+ WSITGIRSSGD+LVFEV  ITAKYPSK+F+ES  CEG+RS+S
Subjt:  ALFQWWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCATCTTCATTCTCTTTATCTTCTCGGCTCTCGTTTCTCTTTCGACCCAAACCACTGACTCCAAAGACCTCAAAATTCCACCGTCCTCTGCCCACGCTCGGCT
CGCCAATTATGGATTTCCGTTCGGTCTTCTTCCATCCTCCGTCGTGAGCTACACTATCAACGACACCTCCGGAGACTTCTCTCTGGACCTCGGTGACTCGTGCAAGTTCA
CGCTCCCGCCAGACAACTACGTGGCTTCGTTTTCTAGGGTTGTCACCGGTAAGATTGCCAAGGGTCGGATCCACAGTCTCGACGGGATTCGAGTTCGCGCTTTGTTCCAG
TGGTGGTCGATCACCGGTATTAGGTCTTCCGGCGATGATTTGGTCTTCGAGGTTGGGTTAATCACCGCCAAGTATCCGTCCAAGAGTTTCAACGAGAGCCCAGCATGTGA
AGGGCGTCGCTCTGCTTCG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCATCTTCATTCTCTTTATCTTCTCGGCTCTCGTTTCTCTTTCGACCCAAACCACTGACTCCAAAGACCTCAAAATTCCACCGTCCTCTGCCCACGCTCGGCT
CGCCAATTATGGATTTCCGTTCGGTCTTCTTCCATCCTCCGTCGTGAGCTACACTATCAACGACACCTCCGGAGACTTCTCTCTGGACCTCGGTGACTCGTGCAAGTTCA
CGCTCCCGCCAGACAACTACGTGGCTTCGTTTTCTAGGGTTGTCACCGGTAAGATTGCCAAGGGTCGGATCCACAGTCTCGACGGGATTCGAGTTCGCGCTTTGTTCCAG
TGGTGGTCGATCACCGGTATTAGGTCTTCCGGCGATGATTTGGTCTTCGAGGTTGGGTTAATCACCGCCAAGTATCCGTCCAAGAGTTTCAACGAGAGCCCAGCATGTGA
AGGGCGTCGCTCTGCTTCG
Protein sequenceShow/hide protein sequence
MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQ
WWSITGIRSSGDDLVFEVGLITAKYPSKSFNESPACEGRRSAS