; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003800 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003800
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationscaffold127:628467..629150
RNA-Seq ExpressionMS003800
SyntenyMS003800
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587944.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]5.8e-5282.43Show/hide
Query:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  +PTH  K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_022144911.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Momordica charantia]1.1e-71100Show/hide
Query:  MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME
        MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME
Subjt:  MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_022973748.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita maxima]4.9e-5181.76Show/hide
Query:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  + TH  K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_023531514.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita pepo subsp. pepo]2.2e-5180.41Show/hide
Query:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL+P    + K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGD+LPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_038880121.1 heavy metal-associated isoprenylated plant protein 45 [Benincasa hispida]3.4e-5278.91Show/hide
Query:  MGKKLKKIASVLDCF--SSASSCSSCFCINSME--DQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHI
        MGKKLKK+A V DCF  SS +S +SCFCINSME  D++++ FDK+PL  + T+ +  Q L LKD+VNGNQTLAFQLKPKMV LRVSMHC+GCARKVEKHI
Subjt:  MGKKLKKIASVLDCF--SSASSCSSCFCINSME--DQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHI

Query:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        SKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  SKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

TrEMBL top hitse value%identityAlignment
A0A0A0LZH7 HMA domain-containing protein1.7e-4977.4Show/hide
Query:  KLKKIASVLDCFS-SASSCS--SCFCINSM--EDQQEDEFDKEPLMPLPTHNQKEQSL-RLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHIS
        KLKK+  V DCFS S++SCS  SCFCINSM  ED++++ FDK+PL  +  +N+K+  L  LKD+VNGNQTLAFQLKPKMV LRVSMHC+GCARKVEKHIS
Subjt:  KLKKIASVLDCFS-SASSCS--SCFCINSM--EDQQEDEFDKEPLMPLPTHNQKEQSL-RLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHIS

Query:  KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS+A
Subjt:  KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A1S3CJJ6 uncharacterized protein LOC1035015433.8e-4977.4Show/hide
Query:  KLKKIASVLDCFS-SASSCS--SCFCINSM--EDQQEDEFDKEPLMPLPTHNQKE-QSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHIS
        KLKK+  V DCFS S++SCS  SCFCINSM  ED++++ FDK+PL  +  +N+K+ Q L LKD+VNGNQTLAFQLKPKMV LRVSMHC+GCARKVEKHIS
Subjt:  KLKKIASVLDCFS-SASSCS--SCFCINSM--EDQQEDEFDKEPLMPLPTHNQKE-QSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHIS

Query:  KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        KMEGVSSYTIDLE KMVIIIGDILPFEVVESVSKVKNAQLWQSS+A
Subjt:  KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1CUT7 protein SODIUM POTASSIUM ROOT DEFECTIVE 15.4e-72100Show/hide
Query:  MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME
        MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME
Subjt:  MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1EZE4 heavy metal-associated isoprenylated plant protein 45-like2.4e-5181.76Show/hide
Query:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  + TH  K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1IE28 heavy metal-associated isoprenylated plant protein 45-like2.4e-5181.76Show/hide
Query:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  + TH  K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

SwissProt top hitse value%identityAlignment
Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 21.0e-1435.9Show/hide
Query:  SSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDIL
        S+ + + S  D      D++P   +       +   L +     +T       ++V+L+VS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI 
Subjt:  SSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDIL

Query:  PFEVVESVSKVKNAQLW
        P E+++S+SKVKNAQ W
Subjt:  PFEVVESVSKVKNAQLW

Q84J88 Heavy metal-associated isoprenylated plant protein 363.1e-0839.39Show/hide
Query:  MLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQSSL
        +LRVS+HC GC RK++K +SK++GV +  ID++ + V +IG++ P  +++ + K  ++A+LW +S+
Subjt:  MLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQSSL

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 12.6e-1538.71Show/hide
Query:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV
        FS  +  S    ++S+ED+     D +   P P      QS         + +       ++V+LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V
Subjt:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV

Query:  IIIGDILPFEVVESVSKVKNAQLW
         + GD+ P  V+ S+SKVKNAQ W
Subjt:  IIIGDILPFEVVESVSKVKNAQLW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 32.9e-1457.58Show/hide
Query:  KMVMLRVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V+LRVS+  HCRGC  KV+KH+SKM+GV+S+ ID  +K V + GDI P EV+  +SKVKNAQ W
Subjt:  KMVMLRVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

Q94BT9 Copper transport protein ATX12.9e-0636.92Show/hide
Query:  VMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQS
        V+LRV+M C GC   V++ + KMEGV S+ +D++ + V + G++ P  V+++V+K  K    W++
Subjt:  VMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQS

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein1.8e-1967.16Show/hide
Query:  KMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS
        ++V+LRVS+HC+GC  KV KHISKMEGV+SYTIDL TK V ++G I P  +VES+SKVK AQLW SS
Subjt:  KMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS

AT2G37390.2 Chloroplast-targeted copper chaperone protein8.4e-1754.69Show/hide
Query:  KMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V+L+VS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E+++S+SKVKNAQ W
Subjt:  KMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein1.2e-3454.68Show/hide
Query:  KLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLV--NGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEG
        KL+KI  V DC    ++  SCFC+N++ D +E+EF+KEPL+   T  +  + +RLKD+V  +  QTLAF LKPK+V L+VSMHC GCA+KVEKHISK++G
Subjt:  KLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLV--NGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEG

Query:  VSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQS
        V+ Y ++LE+K V++ G+ILP +V+ES+ KVKNAQLW S
Subjt:  VSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQS

AT5G02600.1 Heavy metal transport/detoxification superfamily protein1.9e-1638.71Show/hide
Query:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV
        FS  +  S    ++S+ED+     D +   P P      QS         + +       ++V+LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V
Subjt:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV

Query:  IIIGDILPFEVVESVSKVKNAQLW
         + GD+ P  V+ S+SKVKNAQ W
Subjt:  IIIGDILPFEVVESVSKVKNAQLW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein1.9e-1638.71Show/hide
Query:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV
        FS  +  S    ++S+ED+     D +   P P      QS         + +       ++V+LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V
Subjt:  FSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMV

Query:  IIIGDILPFEVVESVSKVKNAQLW
         + GD+ P  V+ S+SKVKNAQ W
Subjt:  IIIGDILPFEVVESVSKVKNAQLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGCTGAAGAAAATTGCAAGTGTTTTGGATTGTTTCAGTAGTGCTTCTTCATGTAGCTCTTGTTTTTGCATAAACTCCATGGAAGATCAGCAAGAAGATGA
GTTTGATAAAGAACCGCTCATGCCTTTGCCTACCCACAACCAGAAGGAGCAGTCGCTGAGATTGAAGGACCTTGTCAATGGAAACCAAACCTTAGCCTTCCAACTTAAGC
CCAAGATGGTGATGTTGAGGGTGTCCATGCACTGTAGAGGCTGTGCAAGAAAAGTGGAGAAGCACATTTCAAAGATGGAAGGAGTGAGCTCGTACACAATAGACTTGGAG
ACGAAAATGGTGATTATTATTGGAGACATTCTGCCTTTTGAAGTGGTGGAGAGCGTCTCCAAAGTCAAAAACGCACAACTCTGGCAATCTTCTCTAGCT
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGCTGAAGAAAATTGCAAGTGTTTTGGATTGTTTCAGTAGTGCTTCTTCATGTAGCTCTTGTTTTTGCATAAACTCCATGGAAGATCAGCAAGAAGATGA
GTTTGATAAAGAACCGCTCATGCCTTTGCCTACCCACAACCAGAAGGAGCAGTCGCTGAGATTGAAGGACCTTGTCAATGGAAACCAAACCTTAGCCTTCCAACTTAAGC
CCAAGATGGTGATGTTGAGGGTGTCCATGCACTGTAGAGGCTGTGCAAGAAAAGTGGAGAAGCACATTTCAAAGATGGAAGGAGTGAGCTCGTACACAATAGACTTGGAG
ACGAAAATGGTGATTATTATTGGAGACATTCTGCCTTTTGAAGTGGTGGAGAGCGTCTCCAAAGTCAAAAACGCACAACTCTGGCAATCTTCTCTAGCT
Protein sequenceShow/hide protein sequence
MGKKLKKIASVLDCFSSASSCSSCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQSLRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSYTIDLE
TKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA