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MS003804 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003804
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold127:664962..665087
RNA-Seq ExpressionMS003804
SyntenyMS003804
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QIT04093.1 Ycf2 protein [Luffa aegyptiaca]7.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]7.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
YP_009752033.1 Ycf2 protein [Cionosicys macranthus]7.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
YP_009752370.1 Ycf2 protein [Bryonia marmorata]7.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]7.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
TrEMBL top hitse value%identityAlignment
A0A343F2F1 Protein Ycf23.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
A0A6H0ESM3 Protein Ycf23.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
A0A6H0ET42 Protein Ycf23.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
A0A6H0EV63 Protein Ycf23.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
A0A6M3RUH1 Protein Ycf23.7e-1395.24Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HFGLLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
SwissProt top hitse value%identityAlignment
B1A978 Protein Ycf28.6e-1592.86Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
Q09MB4 Protein Ycf28.6e-1592.86Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
Q14F97 Protein Ycf25.6e-1490.48Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLIHRQRWLRT SSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
Q49KT6 Protein Ycf28.6e-1592.86Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLIHRQRWLRTNSSLSNGFFRSNT SESYQYLSN+FLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
Q9B1K6 Protein Ycf21.1e-1492.86Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLIHRQRWLRTN+SLSNGFFRSNT SESYQYLSNMFLSN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core8.8e-1588.1Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLI RQRWLRTNSSLSNGFFRSNT SESYQYLSN+F+SN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core8.8e-1588.1Show/hide
Query:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN
        HF LLI RQRWLRTNSSLSNGFFRSNT SESYQYLSN+F+SN
Subjt:  HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTCGGATTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTTCATCCGAGAGTTATCAGTATTTATCAAA
TATGTTCCTATCTAAC
mRNA sequenceShow/hide mRNA sequence
CACTTCGGATTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTTCATCCGAGAGTTATCAGTATTTATCAAA
TATGTTCCTATCTAAC
Protein sequenceShow/hide protein sequence
HFGLLIHRQRWLRTNSSLSNGFFRSNTSSESYQYLSNMFLSN