; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003806 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003806
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine-rich protein-related
Genome locationscaffold127:676423..676692
RNA-Seq ExpressionMS003806
SyntenyMS003806
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046597.1 hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]6.1e-1553.33Show/hide
Query:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQ-------AAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA
        MCYP+      H + R + L  QCNW+L Q        AA+   GD  G   KR+CLCSPT HPGSFRCRLHR+EYVWV R R VK+ SA
Subjt:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQ-------AAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA

KAB5514276.1 hypothetical protein DKX38_028182 [Salix brachista]2.2e-0953.03Show/hide
Query:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR
        R L V   WL+LQA         A VA +G  GG    ++CLCSPT HPGSFRCR HR++YVW GR
Subjt:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR

KAG6589902.1 hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2166.27Show/hide
Query:  MCYPYPHDLQPHLVSRRELGVQCNWLLLQAAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESAS
        MC  YPHD+ P    R  L VQCNW+LLQ AA A    GGG S K++CLCSPT HPGSFRCRLHR+EYVWVGR RMVKS  A+
Subjt:  MCYPYPHDLQPHLVSRRELGVQCNWLLLQAAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESAS

KAG7021840.1 hypothetical protein SDJN02_15568 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1168.97Show/hide
Query:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQAAAVARSGDGGGRSDKRQCLCSPTEHPG
        MC  YPHDL+P LVSRRE LGVQ NW+LLQAA+ A S   GG S K +CLCSPT HPG
Subjt:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQAAAVARSGDGGGRSDKRQCLCSPTEHPG

KGN65356.1 hypothetical protein Csa_020011 [Cucumis sativus]9.4e-1654.02Show/hide
Query:  MCYPYPHDLQPHLVSRREL-GVQCNWLLLQAA----AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA
        MCYP+      H +SRR+   +QCNW+L Q      A       G  S KR+CLCSPT HPGSFRCRLHRNEYVWV R R VK+  A
Subjt:  MCYPYPHDLQPHLVSRREL-GVQCNWLLLQAA----AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA

TrEMBL top hitse value%identityAlignment
A0A061GLS8 Uncharacterized protein3.2e-0949.3Show/hide
Query:  VSRRELGVQCNWLLLQA-----------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR
        V ++ L  Q  W +LQA           A VAR   G G +  +QCLCSPT+HPGSFRCR H  EYVW GR
Subjt:  VSRRELGVQCNWLLLQA-----------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR

A0A0A0LZG6 Uncharacterized protein4.5e-1654.02Show/hide
Query:  MCYPYPHDLQPHLVSRREL-GVQCNWLLLQAA----AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA
        MCYP+      H +SRR+   +QCNW+L Q      A       G  S KR+CLCSPT HPGSFRCRLHRNEYVWV R R VK+  A
Subjt:  MCYPYPHDLQPHLVSRREL-GVQCNWLLLQAA----AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA

A0A5A7TXE6 Uncharacterized protein2.9e-1553.33Show/hide
Query:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQ-------AAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA
        MCYP+      H + R + L  QCNW+L Q        AA+   GD  G   KR+CLCSPT HPGSFRCRLHR+EYVWV R R VK+ SA
Subjt:  MCYPYPHDLQPHLVSRRE-LGVQCNWLLLQ-------AAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA

A0A5N5J6W7 Uncharacterized protein1.1e-0953.03Show/hide
Query:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR
        R L V   WL+LQA         A VA +G  GG    ++CLCSPT HPGSFRCR HR++YVW GR
Subjt:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR

A0A6N2KPX4 Uncharacterized protein1.1e-0953.03Show/hide
Query:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR
        R L V   WL+LQA         A VA +G  GG    ++CLCSPT HPGSFRCR HR++YVW GR
Subjt:  RELGVQCNWLLLQA---------AAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein2.6e-0846.43Show/hide
Query:  LQAAAVARS-GDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA
        ++A A  RS GDGGG   K++C+CSP++HP SF+CR H++EY W+  +    S S+
Subjt:  LQAAAVARS-GDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESA

AT1G67910.1 unknown protein2.1e-0577.27Show/hide
Query:  KRQCLCSPTEHPGSFRCRLHRN
        K  CLCSPT HPGSFRCR+HR+
Subjt:  KRQCLCSPTEHPGSFRCRLHRN

AT1G67910.2 unknown protein2.1e-0577.27Show/hide
Query:  KRQCLCSPTEHPGSFRCRLHRN
        K  CLCSPT HPGSFRCR+HR+
Subjt:  KRQCLCSPTEHPGSFRCRLHRN

AT3G13227.1 serine-rich protein-related9.4e-0653.66Show/hide
Query:  VARSGDGGG--------RSDKRQCLCSPTEHPGSFRCRLHR
        V R G GGG         S ++ CLC+PT HPGSFRCR HR
Subjt:  VARSGDGGG--------RSDKRQCLCSPTEHPGSFRCRLHR

AT5G55980.1 serine-rich protein-related1.2e-0541.67Show/hide
Query:  AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVW----VGRNRMVKSESASKVFS
        ++ R     G+S +  CLCSPT H GSFRCR HR + +     +G N  V   S S  FS
Subjt:  AVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVW----VGRNRMVKSESASKVFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCTTACCCACATGATTTGCAGCCTCACCTGGTAAGCCGGAGGGAGTTGGGTGTCCAATGCAACTGGCTCCTGTTGCAGGCTGCGGCAGTGGCCAGGAGTGG
TGATGGTGGCGGCAGGTCGGATAAAAGACAGTGCTTGTGCTCACCGACCGAGCACCCCGGGTCATTTCGTTGCAGACTACACCGCAACGAGTACGTTTGGGTTGGCCGGA
ATCGGATGGTAAAAAGTGAATCGGCCAGCAAAGTATTTTCCGTCCAACGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACCCTTACCCACATGATTTGCAGCCTCACCTGGTAAGCCGGAGGGAGTTGGGTGTCCAATGCAACTGGCTCCTGTTGCAGGCTGCGGCAGTGGCCAGGAGTGG
TGATGGTGGCGGCAGGTCGGATAAAAGACAGTGCTTGTGCTCACCGACCGAGCACCCCGGGTCATTTCGTTGCAGACTACACCGCAACGAGTACGTTTGGGTTGGCCGGA
ATCGGATGGTAAAAAGTGAATCGGCCAGCAAAGTATTTTCCGTCCAACGA
Protein sequenceShow/hide protein sequence
MCYPYPHDLQPHLVSRRELGVQCNWLLLQAAAVARSGDGGGRSDKRQCLCSPTEHPGSFRCRLHRNEYVWVGRNRMVKSESASKVFSVQR