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MS003812 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003812
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold127:696051..696257
RNA-Seq ExpressionMS003812
SyntenyMS003812
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653118.1 hypothetical protein Csa_023927, partial [Cucumis sativus]7.7e-2694.12Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        NLTPFLFRSLVRLLLSLIVQP A VSTLLFYS+ILPQHMVSERLVRHELLDRENYLFHFLVN LKCFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
PQM39313.1 hypothetical protein Pyn_28550 [Prunus yedoensis var. nudiflora]1.8e-1973.53Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSL+RLL SLI +PAA VSTLL+YS +LPQ+++ ERLVRHELLDRENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
PQQ09806.1 hypothetical protein Pyn_16745 [Prunus yedoensis var. nudiflora]1.8e-1973.53Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSL+RLL SLI +PAA VSTLL+YS +LPQ+++ ERLVRHELLDRENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
PRQ46575.1 hypothetical protein RchiOBHm_Chr2g0090511 [Rosa chinensis]9.1e-1975Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +L P +FRSLVRLL SLI  PAA +STLLFYS +LPQ++V ERLVRHELLD+ENYLFHFLVN L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
XP_002281062.2 PREDICTED: uncharacterized protein LOC100257802 isoform X1 [Vitis vinifera]9.1e-1970.59Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSLVRL+ SL+ QPAA +STLL+YS++LPQ++V ERLV+HELLD+ENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
TrEMBL top hitse value%identityAlignment
A0A0A0LTU9 Uncharacterized protein3.7e-2694.12Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        NLTPFLFRSLVRLLLSLIVQP A VSTLLFYS+ILPQHMVSERLVRHELLDRENYLFHFLVN LKCFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
A0A2P6RJI3 Uncharacterized protein4.4e-1975Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +L P +FRSLVRLL SLI  PAA +STLLFYS +LPQ++V ERLVRHELLD+ENYLFHFLVN L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
A0A314UPA4 Uncharacterized protein8.9e-2073.53Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSL+RLL SLI +PAA VSTLL+YS +LPQ+++ ERLVRHELLDRENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
A0A315A6J3 Uncharacterized protein8.9e-2073.53Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSL+RLL SLI +PAA VSTLL+YS +LPQ+++ ERLVRHELLDRENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
A0A438JQ32 Uncharacterized protein4.4e-1970.59Show/hide
Query:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
        +LTP +FRSLVRL+ SL+ QPAA +STLL+YS++LPQ++V ERLV+HELLD+ENYLFHFL+N L+CFW
Subjt:  NLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAATCTTACTCCATTCCTGTTCAGATCACTGGTAAGGCTTCTACTGTCCCTGATTGTCCAGCCTGCAGCCTGTGTCTCGACCTTGCTTTTTTACAGCAACATTCTTCC
TCAGCATATGGTTTCGGAGAGATTGGTTCGGCACGAATTGCTGGATCGAGAAAACTATCTATTCCACTTTCTGGTCAACCTTTTGAAGTGTTTCTGG
mRNA sequenceShow/hide mRNA sequence
CAGAATCTTACTCCATTCCTGTTCAGATCACTGGTAAGGCTTCTACTGTCCCTGATTGTCCAGCCTGCAGCCTGTGTCTCGACCTTGCTTTTTTACAGCAACATTCTTCC
TCAGCATATGGTTTCGGAGAGATTGGTTCGGCACGAATTGCTGGATCGAGAAAACTATCTATTCCACTTTCTGGTCAACCTTTTGAAGTGTTTCTGG
Protein sequenceShow/hide protein sequence
QNLTPFLFRSLVRLLLSLIVQPAACVSTLLFYSNILPQHMVSERLVRHELLDRENYLFHFLVNLLKCFW