; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003813 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003813
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCoiled-coil domain-containing protein 9-like
Genome locationscaffold127:697334..698837
RNA-Seq ExpressionMS003813
SyntenyMS003813
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00104.1 coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa]1.3e-6476.76Show/hide
Query:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR
        +KIRGGPVS   CGG++IL +SA  R  KT    R    R R+ MASI LFSSKTL  PSA YL I SSSSTSHSC  G CRCSFP KP+S S+L+ GRR
Subjt:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR

Query:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RTG+QVVRMAP+EEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE
Subjt:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
XP_008463385.1 PREDICTED: uncharacterized protein LOC103501552 isoform X2 [Cucumis melo]1.1e-6376.22Show/hide
Query:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR
        +KIRGGPVS   CGG++IL +SA  R  KT    R    R+R+ MASI LFSSKTL  PSA YL I SSSSTSHSC  G CRCSFP KP+S S+L+ GRR
Subjt:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR

Query:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RTG+QVVRMAP+EEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP PLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE
Subjt:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
XP_022145037.1 uncharacterized protein LOC111014560 [Momordica charantia]2.1e-70100Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
XP_022987895.1 uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]5.4e-5887.86Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICL SSKTLALPSA YL ISSSSTSHSC FG CR SFP KP+  S+L+I RRRTG+ VVRMAP+EEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
XP_038879472.1 uncharacterized protein LOC120071334 [Benincasa hispida]4.4e-6089.29Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASI LFSSKTL LPSA YL ISSSST+H+C FG CRCSFP KP+S S+L+IGRRRTG+QVVRMAP+EEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
TrEMBL top hitse value%identityAlignment
A0A1S3CKP8 uncharacterized protein LOC103501552 isoform X25.4e-6476.22Show/hide
Query:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR
        +KIRGGPVS   CGG++IL +SA  R  KT    R    R+R+ MASI LFSSKTL  PSA YL I SSSSTSHSC  G CRCSFP KP+S S+L+ GRR
Subjt:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR

Query:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RTG+QVVRMAP+EEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP PLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE
Subjt:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
A0A5A7TT41 Histone chaperone ASF1-like5.4e-6476.22Show/hide
Query:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR
        +KIRGGPVS   CGG++IL +SA  R  KT    R    R+R+ MASI LFSSKTL  PSA YL I SSSSTSHSC  G CRCSFP KP+S S+L+ GRR
Subjt:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR

Query:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RTG+QVVRMAP+EEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP PLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE
Subjt:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
A0A5D3BLF1 Coiled-coil domain-containing protein 9-like6.4e-6576.76Show/hide
Query:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR
        +KIRGGPVS   CGG++IL +SA  R  KT    R    R R+ MASI LFSSKTL  PSA YL I SSSSTSHSC  G CRCSFP KP+S S+L+ GRR
Subjt:  KKIRGGPVSSNCCGGHWILGQSA-ERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHI-SSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR

Query:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        RTG+QVVRMAP+EEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE
Subjt:  RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
A0A6J1CVD6 uncharacterized protein LOC1110145601.0e-70100Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL
A0A6J1JI28 uncharacterized protein LOC111485300 isoform X12.6e-5887.86Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICL SSKTLALPSA YL ISSSSTSHSC FG CR SFP KP+  S+L+I RRRTG+ VVRMAP+EEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17240.1 unknown protein4.4e-3463.57Show/hide
Query:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MAS+C  S++ L  PS   L   +  +S S S G C  S  +   S       R R   QVV MAP+EEKLTRRNPLDFPIEWERPKPGRRPDIFP+FSP
Subjt:  MASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPP+P DPPEEDEEEEEKKEEEEENPD+E  ++PE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
AT3G24506.1 unknown protein1.2e-2858.52Show/hide
Query:  SSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR-RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLP
        SS   A PS ++   S  +   SCSF           ++     + R+ R   QVV MAP+EEKLTRRNPLDFPIEWERPKPGRRPDIFP+FSPMK+PLP
Subjt:  SSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRR-RTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLP

Query:  PPLPCDPPEEDEEEEEKKEEE-EENPDKENPDEPE
        PP+P DPPEE+EEEEEKKEEE E++P+KE+ D+P+
Subjt:  PPLPCDPPEEDEEEEEKKEEE-EENPDKENPDEPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAAATAAGAGGCGGTCCGGTGTCGAGCAACTGTTGTGGCGGCCATTGGATTTTGGGACAATCAGCAGAGAGAATCAGGAAGACTGAGGAGGAGGGTAGACGAGAGCC
AGAGAGGACGAGAGAGATCATGGCGTCCATATGCCTGTTCAGCTCTAAAACCCTAGCGTTACCCTCCGCGGTCTACCTACACATATCTTCATCATCTACAAGCCATAGCT
GCTCTTTCGGCAACTGCAGATGCTCTTTCCCATACAAACCAGTTTCCAATTCGCATTTGGTAATTGGTAGAAGGAGAACGGGGAAGCAGGTGGTTCGAATGGCCCCGGAT
GAAGAGAAGCTTACTCGTCGCAATCCTCTCGATTTCCCAATTGAATGGGAGAGGCCTAAGCCAGGACGTAGACCAGATATCTTTCCTCAGTTTAGTCCCATGAAAACACC
ATTGCCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAAGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGT
TCCTT
mRNA sequenceShow/hide mRNA sequence
AAGAAAATAAGAGGCGGTCCGGTGTCGAGCAACTGTTGTGGCGGCCATTGGATTTTGGGACAATCAGCAGAGAGAATCAGGAAGACTGAGGAGGAGGGTAGACGAGAGCC
AGAGAGGACGAGAGAGATCATGGCGTCCATATGCCTGTTCAGCTCTAAAACCCTAGCGTTACCCTCCGCGGTCTACCTACACATATCTTCATCATCTACAAGCCATAGCT
GCTCTTTCGGCAACTGCAGATGCTCTTTCCCATACAAACCAGTTTCCAATTCGCATTTGGTAATTGGTAGAAGGAGAACGGGGAAGCAGGTGGTTCGAATGGCCCCGGAT
GAAGAGAAGCTTACTCGTCGCAATCCTCTCGATTTCCCAATTGAATGGGAGAGGCCTAAGCCAGGACGTAGACCAGATATCTTTCCTCAGTTTAGTCCCATGAAAACACC
ATTGCCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAAGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGT
TCCTT
Protein sequenceShow/hide protein sequence
KKIRGGPVSSNCCGGHWILGQSAERIRKTEEEGRREPERTREIMASICLFSSKTLALPSAVYLHISSSSTSHSCSFGNCRCSFPYKPVSNSHLVIGRRRTGKQVVRMAPD
EEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEFL