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MS003818 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003818
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold127:737899..738438
RNA-Seq ExpressionMS003818
SyntenyMS003818
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]4.7e-5164.32Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN
        M L  SIS TKKFFKKT+CNFKSFFS +YHRLPK  PPPF AGP M KD          +VQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN

Query:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        IGATHQRK QENR+   + SS  Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF
Subjt:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

XP_022145016.1 uncharacterized protein LOC111014544 [Momordica charantia]3.5e-9499.44Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG
        MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGP MEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG

Query:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
Subjt:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]4.0e-5063.78Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN
        M L  SIS TKKFF+KT+CNFKSFFS +YHRLPK  PPPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN

Query:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        IGATHQRK QENR+   + SS  Y  DERR+CLVAKKIKELEKLD+RNV H+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF
Subjt:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]1.6e-5164.67Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNI
        M L  SIS TKKFFKKTICNFKSFFS +YHRLPK  PPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  I
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNI

Query:  GATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        GATHQRK QENR+   + S   Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF
Subjt:  GATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

XP_038880084.1 uncharacterized protein LOC120071772 [Benincasa hispida]9.5e-5265.57Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSMN
        M LRASISNTKKFFKKT+CNFKSFFS SYHRLP+  PPF A   M+KDSTF FI SQ+EVQ+G FMKNN  + ALHF  N M++T+ E   V+K+   + 
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSMN

Query:  NIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
         I ATHQRK QEN +  S       +RRMCLVAKK+KELEK+D+RNVDHA+DI+E+LHYYSRLT P +LEIVDKFF +IFAEF
Subjt:  NIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

TrEMBL top hitse value%identityAlignment
A0A0A0LTA6 Uncharacterized protein1.6e-4962.77Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPN--------KMEETQMEIRVVDKS
        MLLRA+ISNTKKFF+KT+ NFKSFFS +YHRLPK PPPF A   M+K+STF FISSQ+EVQ+G  MKNN+     PN         M ++Q E   V+KS
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPN--------KMEETQMEIRVVDKS

Query:  YGSMNNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
           M   GATHQRK +EN +      Y   +RRMCLVAK +KELEKLD+RNVDHALDIEEILHYYSRLT P +LEIVDKFF +IF EF
Subjt:  YGSMNNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

A0A1S3CJL1 uncharacterized protein LOC1035015562.1e-4964.67Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPF-AAGPHMEKDSTFQFISSQKEVQSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSM
        MLLRA+ISNTKKFF+KTI NFKSFFS +YHRLPK PPPF A    M+KDSTF FIS  +EVQ+G FMKNN  + A+H   + M E+QME   V+K+   M
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPF-AAGPHMEKDSTFQFISSQKEVQSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSM

Query:  NNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
          IG THQRK QEN +      Y   +RRMCLVAK +KELEKLD+RNVDH LDIEEILHYYSRLT P +LE+VDKF  +IFAEF
Subjt:  NNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

A0A6J1CV44 uncharacterized protein LOC1110145441.7e-9499.44Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG
        MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGP MEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIG

Query:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
Subjt:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

A0A6J1F4Y2 uncharacterized protein LOC1114409091.9e-5063.78Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN
        M L  SIS TKKFF+KT+CNFKSFFS +YHRLPK  PPPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNN

Query:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        IGATHQRK QENR+   + SS  Y  DERR+CLVAKKIKELEKLD+RNV H+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF
Subjt:  IGATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

A0A6J1IF62 uncharacterized protein LOC1114722337.9e-5264.67Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNI
        M L  SIS TKKFFKKTICNFKSFFS +YHRLPK  PPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  I
Subjt:  MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNI

Query:  GATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
        GATHQRK QENR+   + S   Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF
Subjt:  GATHQRKRQENRD---RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein5.6e-1030Show/hide
Query:  SISNTKKFFKKTICNFKS-FFSTSYHRLPKTPP---PFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSY-GSMNNIG
        SI    +F KKT+ + KS   S+ Y  LP   P   P++      +DS  Q   S   +                        +  V D ++  S+NN  
Subjt:  SISNTKKFFKKTICNFKS-FFSTSYHRLPKTPP---PFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSY-GSMNNIG

Query:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
          H++K ++  +    +K     +R   +A+K+K+L  +D R+VDHALD+ E L  YS +  P YL+IVD FFT+++ EF
Subjt:  ATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF

AT3G16070.1 unknown protein1.1e-0826.59Show/hide
Query:  TKKFFKKTICNFKSFFSTSYHRLPKTPPPFAA----GPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQR
        T  FF +T+ + KS    +  +LP+    F+        ++ D+ +    +  E        +  N++  P K+E    E                  Q 
Subjt:  TKKFFKKTICNFKSFFSTSYHRLPKTPPPFAA----GPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQR

Query:  KRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFA
        +  + +  E+ S Y    R    + KKI E+   ++ +++ ALD+EE LHYYSR++ P YL IVDKFFT++++
Subjt:  KRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFA

AT3G24535.1 unknown protein1.3e-1432.26Show/hide
Query:  MLLRASISNTKKFFKKTICNFKSFF--STSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNN
        M+LR+SISNT+K F+KTI NFKSFF  + +YH+LPKTP            ST    +   +  +   + ++S+++H          + +   K Y + N 
Subjt:  MLLRASISNTKKFFKKTICNFKSFF--STSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNN

Query:  IGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNV----DHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
          A+  + R  +RD     + +  + ++ LV  K+KE+EK+ + ++     +  D+ E LH YSRL   AYL++V+ FF E++++F
Subjt:  IGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNV----DHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCC
GCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTC
ATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAAT
CGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGC
TTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCC
GCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTC
ATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAAT
CGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGC
TTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC
Protein sequenceShow/hide protein sequence
MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQEN
RDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF