; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003845 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003845
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontransmembrane protein 234 homolog
Genome locationscaffold127:920668..921075
RNA-Seq ExpressionMS003845
SyntenyMS003845
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018908 - Putative transmembrane family 234


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023602.1 Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5186.26Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVA+G+VWGATNALMRRGALLWDQAL SSSN +       SSL RWLKLLSIWQYT+PFL+NL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCI
Subjt:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI

XP_016902925.1 PREDICTED: transmembrane protein 234 homolog [Cucumis melo]6.5e-5385.93Show/hide
Query:  KQRLGKKKMIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATT
        +QR   KKMIGDVEKMVA+GLVWGATNALMRRGALLWDQAL SSS+ +   SSL RWLKL SIWQYT+PFLLNL+ASATFFAILSDAPISLAVPVTNATT
Subjt:  KQRLGKKKMIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATT

Query:  FAATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        FAATAVFG+LLGE TRVGYALFGTALIG GVWLCI
Subjt:  FAATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI

XP_022961299.1 transmembrane protein 234 homolog [Cucurbita moschata]1.9e-5287.02Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVA+G+VWGATNALMRRGALLWDQAL SSSN +       SSL RWLKLLSIWQYT+PFL+NL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCI
Subjt:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]2.5e-5287.02Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVA+G+VWGATNALMRRGALLWDQAL SSSN +       SSL RWLKLLSIWQYT+PFL+NL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCI
Subjt:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI

XP_038879672.1 transmembrane protein 234 homolog [Benincasa hispida]3.8e-5390.55Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVA+GLVWGATNALMRRGALLWDQAL SSSN +   SSL RWLKLLSIWQYT+PFLLNL+ASATFFAILSDAPISLAVP+TNATTFAATAVFG
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFG

Query:  MLLGEQTRVGYALFGTALIGLGVWLCI
        MLLGE TRVGYALFGTALIGLGVWLCI
Subjt:  MLLGEQTRVGYALFGTALIGLGVWLCI

TrEMBL top hitse value%identityAlignment
A0A1S4E4M5 transmembrane protein 234 homolog3.2e-5385.93Show/hide
Query:  KQRLGKKKMIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATT
        +QR   KKMIGDVEKMVA+GLVWGATNALMRRGALLWDQAL SSS+ +   SSL RWLKL SIWQYT+PFLLNL+ASATFFAILSDAPISLAVPVTNATT
Subjt:  KQRLGKKKMIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATT

Query:  FAATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        FAATAVFG+LLGE TRVGYALFGTALIG GVWLCI
Subjt:  FAATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI

A0A5A7VAD4 Transmembrane protein 234-like protein1.3e-5188.19Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFG
        MIGDVEKMVA+GLVWGATNALMRRGALLWDQAL SSS+ +   SSL RWLKL SIWQYT+PFLLNL+ASATFFAILSDAPISLAVPVTNATTFAATAVFG
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS--SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFG

Query:  MLLGEQTRVGYALFGTALIGLGVWLCI
        +LLGE TRVGYALFGTALIG GVWLCI
Subjt:  MLLGEQTRVGYALFGTALIGLGVWLCI

A0A6J1CU00 transmembrane protein 234 homolog isoform X11.6e-4999.08Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGML
        MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGML
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGML

Query:  LGEQTRVGY
        LGEQTRVG+
Subjt:  LGEQTRVGY

A0A6J1HBE7 transmembrane protein 234 homolog9.2e-5387.02Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVA+G+VWGATNALMRRGALLWDQAL SSSN +       SSL RWLKLLSIWQYT+PFL+NL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCI
Subjt:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI

A0A6J1JK46 transmembrane protein 234 homolog7.8e-5285.5Show/hide
Query:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVA+G+ WGATNALMRRGALLWDQAL SSSN +       SS  RWLKLLSIWQYT+PFL+NL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSS------SSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        AVFGMLLGE+TRVGYALFGTALIGLGVWLCI
Subjt:  AVFGMLLGEQTRVGYALFGTALIGLGVWLCI

SwissProt top hitse value%identityAlignment
A0NGI1 Transmembrane protein 234 homolog2.3e-0831.67Show/hide
Query:  VEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEQ
        V  ++ V ++WGATN  ++RG++ +++    S  G     +R+  L++ WQY +P ++N   S  +   L    +SL VP+ N+ TF  TA+   LLGE+
Subjt:  VEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEQ

Query:  TRVGYALFGTALIGLGVWLC
                G  L+ LG  +C
Subjt:  TRVGYALFGTALIGLGVWLC

Q54ZG7 Transmembrane protein 234 homolog1.3e-1136.07Show/hide
Query:  DVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGE
        ++  ++ VG +WG TN L++RG+    +      N  S  +  ++ L +   YTIP L+NLS S  FF  LS   ISL VP++N+ TF  T++ GMLLGE
Subjt:  DVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGE

Query:  QTRVGYALFGTALIGLGVWLCI
        +     +  G   +  GV +C+
Subjt:  QTRVGYALFGTALIGLGVWLCI

Q8R1E7 Transmembrane protein 2343.6e-0631.45Show/hide
Query:  GDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLK-LLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLL
        G V  +V V  +WG T  L++R +   +Q    +    +  LL+ +K L    +Y +PFLLN S S  ++  L+   ++LAVP+ N+     T + G +L
Subjt:  GDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLK-LLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGMLL

Query:  GEQTRVGYALFGTALIGLGVWLCI
        GE      A+ G  L   G+ +CI
Subjt:  GEQTRVGYALFGTALIGLGVWLCI

Arabidopsis top hitse value%identityAlignment
AT5G19570.1 unknown protein1.0e-4064.66Show/hide
Query:  DVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSS-----------SLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFA
        D++KMVAVGLVWGATNAL+RRGAL WD+  +SS+  S S           +L  W+ LL  WQY+IPFL+NLSASATFFA+LS APISLAVPVTNATTFA
Subjt:  DVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSS-----------SLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFA

Query:  ATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI
        ATA FG+LLGE+T++G AL GT+ I  G+WLC+
Subjt:  ATAVFGMLLGEQTRVGYALFGTALIGLGVWLCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGCGAAACAGAGACTAGGGAAGAAGAAGATGATCGGAGATGTAGAGAAAATGGTTGCGGTTGGTCTAGTCTGGGGCGCCACTAACGCTCTGATGCGCCGCGGCGCGCT
TCTCTGGGACCAAGCTCTCAATTCTTCCTCCAATGGCTCAAGCTCCTCCCTCCTCCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACCATCCCCTTTCTGCTTAACC
TCTCCGCCTCAGCTACCTTCTTCGCTATTCTAAGCGATGCCCCTATATCCCTCGCCGTGCCCGTCACCAACGCAACCACATTTGCCGCCACCGCCGTCTTTGGAATGCTC
CTTGGCGAACAGACTCGCGTCGGGTACGCTCTGTTTGGTACCGCTCTTATTGGTTTGGGCGTTTGGCTTTGCATTAAG
mRNA sequenceShow/hide mRNA sequence
TCAGCGAAACAGAGACTAGGGAAGAAGAAGATGATCGGAGATGTAGAGAAAATGGTTGCGGTTGGTCTAGTCTGGGGCGCCACTAACGCTCTGATGCGCCGCGGCGCGCT
TCTCTGGGACCAAGCTCTCAATTCTTCCTCCAATGGCTCAAGCTCCTCCCTCCTCCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACCATCCCCTTTCTGCTTAACC
TCTCCGCCTCAGCTACCTTCTTCGCTATTCTAAGCGATGCCCCTATATCCCTCGCCGTGCCCGTCACCAACGCAACCACATTTGCCGCCACCGCCGTCTTTGGAATGCTC
CTTGGCGAACAGACTCGCGTCGGGTACGCTCTGTTTGGTACCGCTCTTATTGGTTTGGGCGTTTGGCTTTGCATTAAG
Protein sequenceShow/hide protein sequence
SAKQRLGKKKMIGDVEKMVAVGLVWGATNALMRRGALLWDQALNSSSNGSSSSLLRWLKLLSIWQYTIPFLLNLSASATFFAILSDAPISLAVPVTNATTFAATAVFGML
LGEQTRVGYALFGTALIGLGVWLCIK