; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIntegrase-type DNA-binding superfamily protein
Genome locationscaffold127:990816..991496
RNA-Seq ExpressionMS003855
SyntenyMS003855
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589944.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.6e-8071.88Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA
        IEND    S SS S S S PSPS+S             SG AV SNRKR +    N+NSKHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA
Subjt:  IENDQPAASSSSSSSSSSPPSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA

Query:  RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP---------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEF
        RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI TP P         SSSSS+LC   PEELS+IV+LPSLGTSYETAELGNEF
Subjt:  RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP---------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEF

Query:  VFVDSVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        VFVDSVEGWLYSYPWY RVN N D+E  +G  F DQI    +   ++ FEAFLWQ+
Subjt:  VFVDSVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

KAG7023608.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-8173.02Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA
        IEND    S SS S S S PSPS+S             SG AV SNRKR +    N+NSKHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA
Subjt:  IENDQPAASSSSSSSSSSPPSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA

Query:  RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP-----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVD
        RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI TP P     SSSSS+LC   PEELS+IV+LPSLGTSYETAELGNEFVFVD
Subjt:  RAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP-----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVD

Query:  SVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        SVEGWLYSYPWY RVN N D+E  +G  F DQI    +   ++ FEAFLWQ+
Subjt:  SVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

XP_022961344.1 dehydration-responsive element-binding protein 3-like [Cucurbita moschata]4.2e-8173.39Show/hide
Query:  IENDQPAASSSSSSSSSSPPS----------PSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH
        IEND    S SS S S SP S           S  SG AV SNRKR +    N+NSKHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH
Subjt:  IENDQPAASSSSSSSSSSPPS----------PSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH

Query:  DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEG
        DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI TP P    SSSSS+LC   PEELS+IV+LPSLGTSYETAELGNEFVFVDSVEG
Subjt:  DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEG

Query:  WLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        WLYSYPWY RVN N D+E  +G  F DQI    +   +++FEAFLWQ+
Subjt:  WLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

XP_023516296.1 dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo]2.5e-8172.51Show/hide
Query:  IENDQPAASSSSSSSSSSP-PSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMA
        IEND    S SS S S SP PSPS+S             SG AV SNRKR +    N+N+KHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMA
Subjt:  IENDQPAASSSSSSSSSSP-PSPSTS-------------SGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMA

Query:  ARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDS
        ARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI   P    SSSSS+LC   PEELS+IV+LPSLGTSYETAELGNEFVFVDS
Subjt:  ARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDS

Query:  VEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        VEGWLYSYPWY RVN N D+E  +G  F DQI    +   ++ FEAFLWQ+
Subjt:  VEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

XP_038878688.1 dehydration-responsive element-binding protein 3-like [Benincasa hispida]1.2e-7871.89Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPSTSSGAAVGSNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTI
        + + QP + SSS S S+ P    +SS AAV SNR   KRPRE S NNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTI
Subjt:  IENDQPAASSSSSSSSSSPPSPSTSSGAAVGSNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTI

Query:  KGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP-----------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEGW
        KG +AILNFPELA  FPRPAS SPRDVQAAAAKAASMEI   P           SSSS+ LC   PEELS+IVELPSLGTSYETAELGNEFVFVDSVEGW
Subjt:  KGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP-----------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEGW

Query:  LYSYPWYHRV-NANVDQEDDYGSLFTDQILMAEDT------TAFEAFLW
        LYSYPWY+RV NA+   ++DY   F +QILMA+ T      +AFEAFLW
Subjt:  LYSYPWYHRV-NANVDQEDDYGSLFTDQILMAEDT------TAFEAFLW

TrEMBL top hitse value%identityAlignment
A0A0A0LWW4 AP2/ERF domain-containing protein4.0e-7770.87Show/hide
Query:  IENDQPAASSS--SSSSSSSPPSPSTSSGAAVGSNR---KRPRE-TSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA
        +END    +SS   S SSS   SP +SS A V SNR   KRPRE  + NNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA
Subjt:  IENDQPAASSS--SSSSSSSPPSPSTSSGAAVGSNR---KRPRE-TSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA

Query:  LTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP--------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFV
        LTIKG SAILNFPELA QFPRPAS SPRDVQAAAAKAASMEI   P              SSSS++LC   PEEL++IVELPSLGTSYETAELGNEFVFV
Subjt:  LTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPNP--------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFV

Query:  DSVEGWLYSYPWYHRVNANVDQ----EDDYGSLFTDQILMAEDTTAFEAFLWQH
        DSVEGWLYSYPWY+RV +N +Q    ++DYG  F DQILMA+ T   + FLWQ+
Subjt:  DSVEGWLYSYPWYHRVNANVDQ----EDDYGSLFTDQILMAEDTTAFEAFLWQH

A0A6J1EZ61 ethylene-responsive transcription factor TINY-like8.9e-7768.94Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPST------SSGAAVGSNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD
        I ++ PA  +SSSSSSSS  S S+       +  AV SNR   KRPRETS N NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD
Subjt:  IENDQPAASSSSSSSSSSPPSPST------SSGAAVGSNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD

Query:  VAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-----------TPNPSSSSSA------LC---PEELSQIVELPSLGTSYETAELG
        VAALTIKGNSAILNFP+LA QFPRPASNSPRDVQAAAAKAASME+           +P+PSSSSS+      LC   PEELS+IVELPSLGTSYET ELG
Subjt:  VAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-----------TPNPSSSSSA------LC---PEELSQIVELPSLGTSYETAELG

Query:  NEFVFVDSVEGWLYSYPWYHRV-NANVDQEDDYGSLFTDQILMAE-------DTTAFEAFLWQH
         EFVF DS+EGWLYSYPWY+RV N   ++E+DY  LF DQI MA+        TT FE FLW H
Subjt:  NEFVFVDSVEGWLYSYPWYHRV-NANVDQEDDYGSLFTDQILMAE-------DTTAFEAFLWQH

A0A6J1HDR9 dehydration-responsive element-binding protein 3-like2.1e-8173.39Show/hide
Query:  IENDQPAASSSSSSSSSSPPS----------PSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH
        IEND    S SS S S SP S           S  SG AV SNRKR +    N+NSKHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH
Subjt:  IENDQPAASSSSSSSSSSPPS----------PSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAH

Query:  DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEG
        DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI TP P    SSSSS+LC   PEELS+IV+LPSLGTSYETAELGNEFVFVDSVEG
Subjt:  DVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP----SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFVFVDSVEG

Query:  WLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        WLYSYPWY RVN N D+E  +G  F DQI    +   +++FEAFLWQ+
Subjt:  WLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

A0A6J1IDV7 ethylene-responsive transcription factor TINY-like5.2e-7770.23Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPSTSS------GAAVG--SNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARA
        + ND    +S+SSSSSS   S S+SS      GAA+   SNR   KRPRETS N NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARA
Subjt:  IENDQPAASSSSSSSSSSPPSPSTSS------GAAVG--SNR---KRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARA

Query:  HDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNE
        HDVAALTIKGNSAILNFP+LA QFPRPASNSPRDVQAAAAKAASME+ TP P            SSSSS LC   PEELS+IVELPSLGTSYET ELG E
Subjt:  HDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNE

Query:  FVFVDSVEGWLYSYPWYHRV-NANVDQEDDYGSLFTDQILMAE-------DTTAFEAFLWQH
        FVF DS+EGWLYSYPWY+RV N   ++E+DY  LF DQILMA+        TT FE F W H
Subjt:  FVFVDSVEGWLYSYPWYHRV-NANVDQEDDYGSLFTDQILMAE-------DTTAFEAFLWQH

A0A6J1JFH6 dehydration-responsive element-binding protein 3-like9.5e-7970.59Show/hide
Query:  IENDQPAASSSSSSSSSSPPSPSTSSGAAV---------GSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD
        IEND     S++ S SS  PSPS+S   +          G   KRPRE   N+NSKHP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD
Subjt:  IENDQPAASSSSSSSSSSPPSPSTSSGAAV---------GSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD

Query:  VAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFV
        VAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI TP P            SSSSS+LC   PEELS+IVELPSLGTSYETAELGNEFV
Subjt:  VAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI-TPNP------------SSSSSALC---PEELSQIVELPSLGTSYETAELGNEFV

Query:  FVDSVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH
        FVDSVEGWLYSYPWY RVN N D+E  +G  F DQI    +   ++ FEAFLWQ+
Subjt:  FVDSVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQI---LMAEDTTAFEAFLWQH

SwissProt top hitse value%identityAlignment
O80654 Ethylene-responsive transcription factor ERF0371.3e-4052.09Show/hide
Query:  SSSSPPSPSTSSGAAVGSNRKRPRETSGNNNSK-----HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPEL
        + SS  S   SS      +    ++ S   N+K      P +RGVRMR WGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD AALTIKG SA+LNFPEL
Subjt:  SSSSPPSPSTSSGAAVGSNRKRPRETSGNNNSK-----HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPEL

Query:  ADQFPRPASNSPRDVQAAAAKAASMEITP----------------------------------NPSSSSSALCPEELSQIVELPSLGTSYETAELGNEFV
        A   PRPAS+SPRDVQAAAA AA+M+ +P                                  +PSS  +A   EELS+IVELPSL TSY+  E  +EFV
Subjt:  ADQFPRPASNSPRDVQAAAAKAASMEITP----------------------------------NPSSSSSALCPEELSQIVELPSLGTSYETAELGNEFV

Query:  FVDSVEGWLYSYPWY
        +VDS   +  S PWY
Subjt:  FVDSVEGWLYSYPWY

Q39127 Ethylene-responsive transcription factor TINY5.4e-4753.52Show/hide
Query:  SPSTSS--GAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS
        S ST S   +AV    +  ++    ++ KHPV+RGVR R WGKWVSEIREPRKKSRIWLGTF +PEMAARAHDVAAL+IKG SAILNFP+LA  FPRP+S
Subjt:  SPSTSS--GAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS

Query:  NSPRDVQAAAAKAASMEITPNPSS-------------------SSSALCPEELSQIVELPSLGTSYE-TAELGNEFVFVDSVEGWLYSYPW----YHRVN
         SPRD+Q AA KAA ME + + SS                   SSSA   EEL +IVELPSLG+SY+   +LGNEF+F DS + W Y   W    Y  + 
Subjt:  NSPRDVQAAAAKAASMEITPNPSS-------------------SSSALCPEELSQIVELPSLGTSYE-TAELGNEFVFVDSVEGWLYSYPW----YHRVN

Query:  ANVDQEDDYGSLF
        A++ Q+ D   L+
Subjt:  ANVDQEDDYGSLF

Q9LU18 Ethylene-responsive transcription factor ERF0361.5e-3649.51Show/hide
Query:  PAASSSSSSSSSSPPSPSTSSGAAVGSN---RKRPRETSGNNNS---KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKG
        P +SSS  S +++  S   S   A   N   RKR R++S  ++S   +HPV+RGVRMR+WGKWVSEIR+PRKK+RIWLGTF T +MAARAHDVAALTIKG
Subjt:  PAASSSSSSSSSSPPSPSTSSGAAVGSN---RKRPRETSGNNNS---KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKG

Query:  NSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPN-----------PSSSSSALC-----PEELSQIVELPSL--GTSYETAELGNEFVFVDSVE
        +SA+LNFPELA  FPRPAS+SP D+Q AAA+AA+M +              PSS SS +       E L +IVELP++  G+  E+     +  + +  +
Subjt:  NSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPN-----------PSSSSSALC-----PEELSQIVELPSL--GTSYETAELGNEFVFVDSVE

Query:  GWLY
         W+Y
Subjt:  GWLY

Q9LYD3 Dehydration-responsive element-binding protein 32.6e-4956.46Show/hide
Query:  PPSPSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS
        P S S S      + +   +   G ++ KHPV+RGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHDVAAL+IKG +AILNFPELAD FPRP S
Subjt:  PPSPSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS

Query:  NSPRDVQAAAAKAASMEITPNPSSSSSALC---------------------PEELSQIVELPSLGTSY--ETAELGNEFVFVDSVEGWLYSYPWYHRVNA
         SPRD+Q AA KAA ME T + SSS+S+                        EEL +IVELPSLG SY  ++A LGNEFVF DSV+  LY  PW      
Subjt:  NSPRDVQAAAAKAASMEITPNPSSSSSALC---------------------PEELSQIVELPSLGTSY--ETAELGNEFVFVDSVEGWLYSYPWYHRVNA

Query:  NVDQEDDYG
            ED+YG
Subjt:  NVDQEDDYG

Q9M080 Ethylene-responsive transcription factor ERF0432.1e-3848.78Show/hide
Query:  NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI--------
        N+K PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF T EMA RAHDVAA++IKG SAILNFPEL+   PRP S SPRDV+AAA KAA M+         
Subjt:  NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI--------

Query:  -------TPNPSSSSS---------------------ALCPEELSQIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYHRVNANV------DQEDD
               T N  S SS                     +   ++L +IV+LPSLGTS   +   NEFV  DS+E  +Y   W       V      D   +
Subjt:  -------TPNPSSSSS---------------------ALCPEELSQIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYHRVNANV------DQEDD

Query:  YGSLF
        Y S+F
Subjt:  YGSLF

Arabidopsis top hitse value%identityAlignment
AT1G77200.1 Integrase-type DNA-binding superfamily protein9.2e-4252.09Show/hide
Query:  SSSSPPSPSTSSGAAVGSNRKRPRETSGNNNSK-----HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPEL
        + SS  S   SS      +    ++ S   N+K      P +RGVRMR WGKWVSEIREPRKKSRIWLGTFSTPEMAARAHD AALTIKG SA+LNFPEL
Subjt:  SSSSPPSPSTSSGAAVGSNRKRPRETSGNNNSK-----HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPEL

Query:  ADQFPRPASNSPRDVQAAAAKAASMEITP----------------------------------NPSSSSSALCPEELSQIVELPSLGTSYETAELGNEFV
        A   PRPAS+SPRDVQAAAA AA+M+ +P                                  +PSS  +A   EELS+IVELPSL TSY+  E  +EFV
Subjt:  ADQFPRPASNSPRDVQAAAAKAASMEITP----------------------------------NPSSSSSALCPEELSQIVELPSLGTSYETAELGNEFV

Query:  FVDSVEGWLYSYPWY
        +VDS   +  S PWY
Subjt:  FVDSVEGWLYSYPWY

AT3G16280.1 Integrase-type DNA-binding superfamily protein1.1e-3749.51Show/hide
Query:  PAASSSSSSSSSSPPSPSTSSGAAVGSN---RKRPRETSGNNNS---KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKG
        P +SSS  S +++  S   S   A   N   RKR R++S  ++S   +HPV+RGVRMR+WGKWVSEIR+PRKK+RIWLGTF T +MAARAHDVAALTIKG
Subjt:  PAASSSSSSSSSSPPSPSTSSGAAVGSN---RKRPRETSGNNNS---KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKG

Query:  NSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPN-----------PSSSSSALC-----PEELSQIVELPSL--GTSYETAELGNEFVFVDSVE
        +SA+LNFPELA  FPRPAS+SP D+Q AAA+AA+M +              PSS SS +       E L +IVELP++  G+  E+     +  + +  +
Subjt:  NSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEITPN-----------PSSSSSALC-----PEELSQIVELPSL--GTSYETAELGNEFVFVDSVE

Query:  GWLY
         W+Y
Subjt:  GWLY

AT4G32800.1 Integrase-type DNA-binding superfamily protein1.5e-3948.78Show/hide
Query:  NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI--------
        N+K PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF T EMA RAHDVAA++IKG SAILNFPEL+   PRP S SPRDV+AAA KAA M+         
Subjt:  NSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAAAKAASMEI--------

Query:  -------TPNPSSSSS---------------------ALCPEELSQIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYHRVNANV------DQEDD
               T N  S SS                     +   ++L +IV+LPSLGTS   +   NEFV  DS+E  +Y   W       V      D   +
Subjt:  -------TPNPSSSSS---------------------ALCPEELSQIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYHRVNANV------DQEDD

Query:  YGSLF
        Y S+F
Subjt:  YGSLF

AT5G11590.1 Integrase-type DNA-binding superfamily protein1.9e-5056.46Show/hide
Query:  PPSPSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS
        P S S S      + +   +   G ++ KHPV+RGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHDVAAL+IKG +AILNFPELAD FPRP S
Subjt:  PPSPSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS

Query:  NSPRDVQAAAAKAASMEITPNPSSSSSALC---------------------PEELSQIVELPSLGTSY--ETAELGNEFVFVDSVEGWLYSYPWYHRVNA
         SPRD+Q AA KAA ME T + SSS+S+                        EEL +IVELPSLG SY  ++A LGNEFVF DSV+  LY  PW      
Subjt:  NSPRDVQAAAAKAASMEITPNPSSSSSALC---------------------PEELSQIVELPSLGTSY--ETAELGNEFVFVDSVEGWLYSYPWYHRVNA

Query:  NVDQEDDYG
            ED+YG
Subjt:  NVDQEDDYG

AT5G25810.1 Integrase-type DNA-binding superfamily protein3.9e-4853.52Show/hide
Query:  SPSTSS--GAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS
        S ST S   +AV    +  ++    ++ KHPV+RGVR R WGKWVSEIREPRKKSRIWLGTF +PEMAARAHDVAAL+IKG SAILNFP+LA  FPRP+S
Subjt:  SPSTSS--GAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPAS

Query:  NSPRDVQAAAAKAASMEITPNPSS-------------------SSSALCPEELSQIVELPSLGTSYE-TAELGNEFVFVDSVEGWLYSYPW----YHRVN
         SPRD+Q AA KAA ME + + SS                   SSSA   EEL +IVELPSLG+SY+   +LGNEF+F DS + W Y   W    Y  + 
Subjt:  NSPRDVQAAAAKAASMEITPNPSS-------------------SSSALCPEELSQIVELPSLGTSYE-TAELGNEFVFVDSVEGWLYSYPW----YHRVN

Query:  ANVDQEDDYGSLF
        A++ Q+ D   L+
Subjt:  ANVDQEDDYGSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGAATGATCAGCCGGCGGCGTCGTCGTCGTCTTCTTCCTCTTCTTCTTCACCGCCTTCGCCGTCCACGTCGTCCGGGGCGGCGGTCGGGTCCAACCGGAAACGGCC
ACGGGAGACTAGTGGTAATAACAACAGCAAGCACCCGGTTTTCCGTGGGGTCCGGATGCGGGCGTGGGGGAAATGGGTATCCGAAATCCGCGAGCCCCGAAAGAAGAGCC
GGATCTGGCTGGGGACTTTCTCCACGCCAGAAATGGCGGCGCGTGCCCACGACGTGGCTGCCCTCACCATTAAAGGAAACTCCGCGATTCTCAACTTCCCGGAACTCGCC
GATCAATTCCCACGACCCGCGTCGAACTCGCCCCGAGATGTACAGGCCGCCGCCGCCAAGGCCGCCTCCATGGAAATAACCCCAAACCCCTCTTCCTCTTCCTCTGCTCT
GTGCCCGGAGGAGCTGAGTCAAATCGTGGAGCTACCGAGTCTGGGGACGAGTTACGAAACGGCCGAGTTGGGGAACGAGTTCGTATTCGTCGACTCAGTGGAGGGGTGGC
TCTACTCATACCCCTGGTACCACAGAGTAAATGCGAATGTGGATCAGGAAGACGATTATGGGTCGTTGTTCACAGACCAAATATTAATGGCGGAAGATACAACTGCCTTT
GAGGCTTTCTTGTGGCAACAC
mRNA sequenceShow/hide mRNA sequence
ATTGAGAATGATCAGCCGGCGGCGTCGTCGTCGTCTTCTTCCTCTTCTTCTTCACCGCCTTCGCCGTCCACGTCGTCCGGGGCGGCGGTCGGGTCCAACCGGAAACGGCC
ACGGGAGACTAGTGGTAATAACAACAGCAAGCACCCGGTTTTCCGTGGGGTCCGGATGCGGGCGTGGGGGAAATGGGTATCCGAAATCCGCGAGCCCCGAAAGAAGAGCC
GGATCTGGCTGGGGACTTTCTCCACGCCAGAAATGGCGGCGCGTGCCCACGACGTGGCTGCCCTCACCATTAAAGGAAACTCCGCGATTCTCAACTTCCCGGAACTCGCC
GATCAATTCCCACGACCCGCGTCGAACTCGCCCCGAGATGTACAGGCCGCCGCCGCCAAGGCCGCCTCCATGGAAATAACCCCAAACCCCTCTTCCTCTTCCTCTGCTCT
GTGCCCGGAGGAGCTGAGTCAAATCGTGGAGCTACCGAGTCTGGGGACGAGTTACGAAACGGCCGAGTTGGGGAACGAGTTCGTATTCGTCGACTCAGTGGAGGGGTGGC
TCTACTCATACCCCTGGTACCACAGAGTAAATGCGAATGTGGATCAGGAAGACGATTATGGGTCGTTGTTCACAGACCAAATATTAATGGCGGAAGATACAACTGCCTTT
GAGGCTTTCTTGTGGCAACAC
Protein sequenceShow/hide protein sequence
IENDQPAASSSSSSSSSSPPSPSTSSGAAVGSNRKRPRETSGNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELA
DQFPRPASNSPRDVQAAAAKAASMEITPNPSSSSSALCPEELSQIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYHRVNANVDQEDDYGSLFTDQILMAEDTTAF
EAFLWQH