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MS003856 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003856
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor DREB1
Genome locationscaffold127:990839..991129
RNA-Seq ExpressionMS003856
SyntenyMS003856
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0015020 - glucuronosyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1824140.1 unnamed protein product [Ananas comosus var. bracteatus]5.9e-1673.44Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLP
        LR A  PL   AA SWARAAISGV KVPSQ+R+FFRGSRISDTHFPHAR+RTPR  GC +L  P
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLP

CAN76868.1 hypothetical protein VITISV_012310 [Vitis vinifera]3.4e-1964.84Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDVDGEGGEEEE
        LR+AE PLM++AATSWARAAISGVEKVPS IR F RGSRISDTH P  RIRTP  TGCLLL LPL++ G    D          E GE+EE
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDVDGEGGEEEE

EYU29278.1 hypothetical protein MIMGU_mgv1a014180mg [Erythranthe guttata]4.1e-1769.86Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRL
        LR+AE PLM+ AATSWARAAISGV KVPS IR F RGSRIS+TH P   IRTPR TGCLLLLL +    R  L
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRL

KYP54164.1 hypothetical protein KK1_000338 [Cajanus cajan]8.3e-1881.97Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLL
        LR+AE+PLMVRAATSWARAAISGV KVPSQ+R F RGSRISDTHFP  R RTP  TGCLLL
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLL

XP_024317198.1 uncharacterized protein LOC112271682 [Brachypodium distachyon]2.9e-1564.47Show/hide
Query:  PLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDV
        PLM  AA SWARAA+S V KVPSQ+R FFRGSRISDTHFPHARIRTPR  GC   LL      RFR    A+P  +
Subjt:  PLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDV

TrEMBL top hitse value%identityAlignment
A0A022QPP6 Uncharacterized protein2.0e-1769.86Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRL
        LR+AE PLM+ AATSWARAAISGV KVPS IR F RGSRIS+TH P   IRTPR TGCLLLLL +    R  L
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRL

A0A0E0EGR0 Uncharacterized protein2.2e-1676.19Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLL
        LR A  PLM  AATSWARAA+S V  VPSQ+R FFRGSRISDTHFPHARIRTPR TGC   LL
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLL

A0A151SH45 Uncharacterized protein4.0e-1881.97Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLL
        LR+AE+PLMVRAATSWARAAISGV KVPSQ+R F RGSRISDTHFP  R RTP  TGCLLL
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLL

A0A7C9CP05 Uncharacterized protein8.1e-1974.67Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDP
        LRIAE PLM+ AATSWARAAISG  KVPS IR FF GSRISDTHFPHA IRTPR TGCLLL L   +R  F L P
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDP

A5BGJ6 Uncharacterized protein1.6e-1964.84Show/hide
Query:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDVDGEGGEEEE
        LR+AE PLM++AATSWARAAISGVEKVPS IR F RGSRISDTH P  RIRTP  TGCLLL LPL++ G    D          E GE+EE
Subjt:  LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDVDGEGGEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGAATCGCGGAGTTTCCTTTAATGGTGAGGGCAGCCACGTCGTGGGCACGCGCCGCCATTTCTGGCGTGGAGAAAGTCCCCAGCCAGATCCGGCTCTTCTTTCGGGG
CTCGCGGATTTCGGATACCCATTTCCCCCACGCCCGCATCCGGACCCCACGGAAAACCGGGTGCTTGCTGTTGTTATTACCACTAGTCTCCCGTGGCCGTTTCCGGTTGG
ACCCGACCGCCGCCCCGGACGACGTGGACGGCGAAGGCGGTGAAGAAGAAGAGGAAGAAGACGACGACGAC
mRNA sequenceShow/hide mRNA sequence
TTGAGAATCGCGGAGTTTCCTTTAATGGTGAGGGCAGCCACGTCGTGGGCACGCGCCGCCATTTCTGGCGTGGAGAAAGTCCCCAGCCAGATCCGGCTCTTCTTTCGGGG
CTCGCGGATTTCGGATACCCATTTCCCCCACGCCCGCATCCGGACCCCACGGAAAACCGGGTGCTTGCTGTTGTTATTACCACTAGTCTCCCGTGGCCGTTTCCGGTTGG
ACCCGACCGCCGCCCCGGACGACGTGGACGGCGAAGGCGGTGAAGAAGAAGAGGAAGAAGACGACGACGAC
Protein sequenceShow/hide protein sequence
LRIAEFPLMVRAATSWARAAISGVEKVPSQIRLFFRGSRISDTHFPHARIRTPRKTGCLLLLLPLVSRGRFRLDPTAAPDDVDGEGGEEEEEEDDDD