; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003860 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003860
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-dependent RNA polymerase
Genome locationscaffold127:1047041..1068223
RNA-Seq ExpressionMS003860
SyntenyMS003860
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0070919 - production of siRNA involved in chromatin silencing by small RNA (biological process)
GO:0031380 - nuclear RNA-directed RNA polymerase complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007855 - RNA-dependent RNA polymerase, eukaryotic-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145049.1 probable RNA-dependent RNA polymerase 5 isoform X1 [Momordica charantia]0.0e+0099.11Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
        MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP

Query:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
        STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPT EKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
Subjt:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE

Query:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
        VWKTFGEKCV+KEDRRV VDWDRR+THIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFA+DTSDRCSTNHLGGSFYAYNKIARDGILLGLR
Subjt:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS
        KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD NLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG AVKGTFLINKQLPS
Subjt:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS

Query:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
        RTIQIRNSMIKVEIDPNLENA+TENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
Subjt:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL

Query:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG
        SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY 
Subjt:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG

Query:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
        IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
Subjt:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM

Query:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
        LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
Subjt:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM

Query:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
        KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
Subjt:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE

Query:  RSFLCLPSVMREIFG
        RSFLCLPSVMREIFG
Subjt:  RSFLCLPSVMREIFG

XP_022145050.1 probable RNA-dependent RNA polymerase 5 isoform X2 [Momordica charantia]0.0e+0098.62Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
        MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP

Query:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
        STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPT EKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
Subjt:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE

Query:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
        VWKTFGEKCV+KEDRRV VDWDRR+THIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFA+DTSDRCSTNHLGGSFYAYNKIARDGILLGLR
Subjt:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS
        KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD NLKRFSAFEEFQNKTLQLTLPGLELREP     FRLFYNG AVKGTFLINKQLPS
Subjt:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS

Query:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
        RTIQIRNSMIKVEIDPNLENA+TENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
Subjt:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL

Query:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG
        SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY 
Subjt:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG

Query:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
        IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
Subjt:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM

Query:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
        LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
Subjt:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM

Query:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
        KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
Subjt:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE

Query:  RSFLCLPSVMREIFG
        RSFLCLPSVMREIFG
Subjt:  RSFLCLPSVMREIFG

XP_023006709.1 probable RNA-dependent RNA polymerase 5 isoform X1 [Cucurbita maxima]0.0e+0086.85Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD   EVPLPPSVEQ LL+IC+QQNQPPPDAK R ALASLGEE ALD+L KISS ++R+L GFI+HMVRNDPC +PQ KMV V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCS S +QS S+CRVYSPQ  GT E+T F+P TP+KS  +SSSVSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRRVYVDWDRR+THIYHCYVALDGSY FKGPFLN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H VSSVASYMARFSLILSK+I LKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQG+FSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPLDESYLQYRLSMLLREEKKSL+SGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPG+PWRPSPSME ITN K NEFSAEDLE+ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LLMLGED KEERNR+RAKILQLINIYYDALDAPKKGGK+IEVPKHLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFED+V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE--ILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCA
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKE  ILYGAEELEGSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCA
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE--ILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCA

Query:  RKQSERSFLCLPSVMREIF
        RK SE SFLCLPSVMR+IF
Subjt:  RKQSERSFLCLPSVMREIF

XP_023006718.1 probable RNA-dependent RNA polymerase 5 isoform X2 [Cucurbita maxima]0.0e+0087.02Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD   EVPLPPSVEQ LL+IC+QQNQPPPDAK R ALASLGEE ALD+L KISS ++R+L GFI+HMVRNDPC +PQ KMV V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCS S +QS S+CRVYSPQ  GT E+T F+P TP+KS  +SSSVSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRRVYVDWDRR+THIYHCYVALDGSY FKGPFLN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H VSSVASYMARFSLILSK+I LKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQG+FSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPLDESYLQYRLSMLLREEKKSL+SGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPG+PWRPSPSME ITN K NEFSAEDLE+ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LLMLGED KEERNR+RAKILQLINIYYDALDAPKKGGK+IEVPKHLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFED+V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKEILYGAEELEGSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCARK
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREIF
         SE SFLCLPSVMR+IF
Subjt:  QSERSFLCLPSVMREIF

XP_023531777.1 probable RNA-dependent RNA polymerase 5 isoform X1 [Cucurbita pepo subsp. pepo]0.0e+0086.61Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD F EVPLPPSVEQ LL+IC QQNQPPPDAK R ALASLGEE ALD L KISS +VR+L GFI+HMVRNDPC +PQ KMV V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCSVS +QS S+CRV SPQ  GT E+T F+  TP+KS  +SS VSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRRVYVDWDRR+THIYHCYV LDGSY+FKGP+LN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H VSSVASYMARFSLILSK+INLKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD  LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQGVFSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPL+ESYLQYRLSMLLREEKKSLKSGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSME I + KPNEFSAEDLE ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LLMLGED KEERNRVRAKIL+LIN+YYDALDAPKKGGK+IEVP+HLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFE++V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKEILYGAEEL+GSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCARK
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREI
         SE SFLCLPSVMR+I
Subjt:  QSERSFLCLPSVMREI

TrEMBL top hitse value%identityAlignment
A0A6J1CTD3 RNA-dependent RNA polymerase0.0e+0098.62Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
        MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP

Query:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
        STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPT EKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
Subjt:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE

Query:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
        VWKTFGEKCV+KEDRRV VDWDRR+THIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFA+DTSDRCSTNHLGGSFYAYNKIARDGILLGLR
Subjt:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS
        KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD NLKRFSAFEEFQNKTLQLTLPGLELREP     FRLFYNG AVKGTFLINKQLPS
Subjt:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS

Query:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
        RTIQIRNSMIKVEIDPNLENA+TENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
Subjt:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL

Query:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG
        SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY 
Subjt:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG

Query:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
        IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
Subjt:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM

Query:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
        LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
Subjt:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM

Query:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
        KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
Subjt:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE

Query:  RSFLCLPSVMREIFG
        RSFLCLPSVMREIFG
Subjt:  RSFLCLPSVMREIFG

A0A6J1CU26 RNA-dependent RNA polymerase0.0e+0099.11Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
        MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSP

Query:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
        STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPT EKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE
Subjt:  STCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELE

Query:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
        VWKTFGEKCV+KEDRRV VDWDRR+THIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFA+DTSDRCSTNHLGGSFYAYNKIARDGILLGLR
Subjt:  VWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS
        KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD NLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG AVKGTFLINKQLPS
Subjt:  KDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPS

Query:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
        RTIQIRNSMIKVEIDPNLENA+TENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
Subjt:  RTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL

Query:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG
        SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY 
Subjt:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYG

Query:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
        IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM
Subjt:  IFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLM

Query:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
        LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM
Subjt:  LGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILM

Query:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
        KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE
Subjt:  KWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSE

Query:  RSFLCLPSVMREIFG
        RSFLCLPSVMREIFG
Subjt:  RSFLCLPSVMREIFG

A0A6J1EPU3 RNA-dependent RNA polymerase0.0e+0086.14Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD F EVPLPPSVEQ LL+IC QQNQPPPDAK R ALASLGEE ALD L KISS +VR+L GFI+HMVRNDPC +PQ K V V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCS S +QS S+CRV SPQ  GT E+T F+  TP+KS  +SS VSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRR+YVDWDRR+THIYHCYVALDGSY+FKGP+LN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H V SVASYMARFSLILSK+I LKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQGVFSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPL+ESYLQYRLSMLLREEKKSL+SGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFR GEPWRPSPSME I N KP+EFSAEDLE+ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LL+LGED KEERN VRAKILQLINIYYDALDAPKKGGK+IEVP+HLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFE++V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKEILYGAEELEGSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCARK
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREIF
         SE SFLCLPSVMR+IF
Subjt:  QSERSFLCLPSVMREIF

A0A6J1L2X5 RNA-dependent RNA polymerase0.0e+0086.85Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD   EVPLPPSVEQ LL+IC+QQNQPPPDAK R ALASLGEE ALD+L KISS ++R+L GFI+HMVRNDPC +PQ KMV V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCS S +QS S+CRVYSPQ  GT E+T F+P TP+KS  +SSSVSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRRVYVDWDRR+THIYHCYVALDGSY FKGPFLN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H VSSVASYMARFSLILSK+I LKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQG+FSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPLDESYLQYRLSMLLREEKKSL+SGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPG+PWRPSPSME ITN K NEFSAEDLE+ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LLMLGED KEERNR+RAKILQLINIYYDALDAPKKGGK+IEVPKHLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFED+V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE--ILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCA
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKE  ILYGAEELEGSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCA
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE--ILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCA

Query:  RKQSERSFLCLPSVMREIF
        RK SE SFLCLPSVMR+IF
Subjt:  RKQSERSFLCLPSVMREIF

A0A6J1L5Q2 RNA-dependent RNA polymerase0.0e+0087.02Show/hide
Query:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF
        MAD   EVPLPPSVEQ LL+IC+QQNQPPPDAK R ALASLGEE ALD+L KISS ++R+L GFI+HMVRNDPC +PQ KMV V SPH SPSS+G VS  
Subjt:  MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPC-TPQKKMVWV-SPHQSPSSSG-VSPF

Query:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF
         SPSTCS S +QS S+CRVYSPQ  GT E+T F+P TP+KS  +SSSVSDR  IPQFVALGELEFR+AFLILSYIGGESLE V TADQI+SLSQL MEKF
Subjt:  QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKF

Query:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL
        E EVWK FGEK VNKEDRRVYVDWDRR+THIYHCYVALDGSY FKGPFLN+TKTHLQRVLGDDNVLMVKFAED SDRCS +H GGSFYAY KIARDGILL
Subjt:  ELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILL

Query:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD
        GLR+Y FFVFKDGGKEEKKKNPT SAVKCYFVRMES AY DK++PYKLSN+T+FEARSLFMH H VSSVASYMARFSLILSK+I LKIDLS+VNVQRI D
Subjt:  GLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGD

Query:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ
        IPCKDV GNV+YRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKT Q+ LPGLELREPPLLIQFRLFYNGLAVKGTFL+NKQ
Subjt:  IPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQ

Query:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR
        LPSRTIQIRNSMIKVE DPNLENAETENS+EVVGTSN PK+ ++SRNLIALLNYGGVPREYFMNILVDAL DVQG+FSSKRAALRVSINNGD+DDFLVAR
Subjt:  LPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVAR

Query:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA
        MILSGIPLDESYLQYRLSMLLREEKKSL+SGRLHVP CYYLMGTADPTCTLES+EVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNA
Subjt:  MILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNA

Query:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ
        KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPG+PWRPSPSME ITN K NEFSAEDLE+ELFKLFLT RFQPSYAKSVAADNW+ALMDQ
Subjt:  KYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQ

Query:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD
        LLMLGED KEERNR+RAKILQLINIYYDALDAPKKGGK+IEVPKHLKAGT PHFMERGK SYTSTSILGQIFDTVNM+QEE PNIEVQKLPCFED+V DD
Subjt:  LLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDD

Query:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
         LMKWKF YEMYR EM+DA+QLDPDAKNVAAEATIKKYKEILYGAEELEGSPRW+EEV KEALAIYHVTY++AMSHG VRYCSFAWRVAGSALF LCARK
Subjt:  ILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREIF
         SE SFLCLPSVMR+IF
Subjt:  QSERSFLCLPSVMREIF

SwissProt top hitse value%identityAlignment
O82188 Probable RNA-dependent RNA polymerase 53.2e-24849.29Show/hide
Query:  PSTCRVYSPQGLGTT----ERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFG
        P      SP G   +    E  S     P      S       +IPQ VALGELEF+K FL+LSYI G+ +  V TAD+IR    LPM ++E  VW   G
Subjt:  PSTCRVYSPQGLGTT----ERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFG

Query:  EKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFK------GPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
             ++DRR+ + WD  +TH Y C VA +GSY FK      GP L +T THL +VLGDDNVL VKFA+    + S+ +    ++ Y  IA++GI++GLR
Subjt:  EKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFK------GPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        +Y FFVFKDGGKEEKKK+ +   VKCYF+R +S A+ D   PY L+ K+++EAR  FMH H   ++A+YMARFSLILSK+  L++D++ +   +I DI C
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLP
         D  G +V+ ++ KP IH+DGTG+ISEDLA  CP+N+FKG+             E  Q    Q         +PPLLIQFR+FY+G AVKGTFL+NK+L 
Subjt:  KDVYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLP

Query:  SRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMI
         RT+Q+R SMIKV  DP+L N  T N++EVV TSN PK+T LS+NL+ALL+YGG+P E+F++IL++ L + + +F +KRAAL  ++N G++DD   A+MI
Subjt:  SRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMI

Query:  LSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY
        L GIPLDE +L+  LS+LL+ EK  LK+G+L V   YYLMGT DPT  L+ DEVCVILE+GQI+G+VLVYRNPGLHFGDIH+L A YV+ L   VGN+K+
Subjt:  LSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY

Query:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQL
         +FF  KGPRS+ DEIAGGDFDGDMY++SRN +LLE F+P EPW   +P  +  + + P++ S E+LE+ELF++FLT  F  S    +AAD+WL +MD+ 
Subjt:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQL

Query:  LMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMY--QEEVPNIEVQKLPCFEDQ-VP
        L+LG+DR EE+  ++ K+L+LI+IYYDALDAPKK G K+ +P  LK    PH+MER K  + STSILG IFD V     +E  P+ E+ KLPCFED+ V 
Subjt:  LMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMY--QEEVPNIEVQKLPCFEDQ-VP

Query:  DDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKL-C
        +  + K +  Y+ YR EM  AM+ D   K+ +A   I++YK+  YGA   E S + LEE+  +ALA+Y + YD+A+ H  V  C F W+VAG  L +   
Subjt:  DDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKL-C

Query:  ARKQSERSFLCLPSVMREIFG
         +K  E+  +C PSV++E++G
Subjt:  ARKQSERSFLCLPSVMREIFG

O82189 Probable RNA-dependent RNA polymerase 46.2e-22344.51Show/hide
Query:  SLHYSISLKAFAMADQFQEVPLPPSVEQLLLEICMQQNQPPP-DAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPH
        ++ Y+ S + F+    + E+ L  SVE +L ++  + N  PP   + R  L+S+ EE AL+TL K+ +   V++L G I++ + +         +W    
Subjt:  SLHYSISLKAFAMADQFQEVPLPPSVEQLLLEICMQQNQPPP-DAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPH

Query:  QSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQI
             SG SP Q P T          +CR        +    S     P           +  +I   +ALGELEF+KAFL+L+Y+GG+SL  V + D+I
Subjt:  QSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQI

Query:  RSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYA
        R    LPM  +E  VW   G+      + R+ ++ D  +TH Y C+VA DGSY+ KG FL NT THL +VLGDDNVL V+F +   +   + +    +  
Subjt:  RSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYA

Query:  YNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKID
        Y +IA++GI++GLR+Y FFVFKDGGK EKKK  +   VKCYF+R  S A  D   PY LS  ++ EAR  FMH H + S A+YMARFSLILSK+  L++D
Subjt:  YNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKID

Query:  LSTVNVQRIGDIPCKDVYGN-VIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG
        ++ + V +I DI C D   N V+ ++GKP IH+DGTG+ISEDLA  CP+N+FKG++    N++                  G  ++EPPLLIQ R+F +G
Subjt:  LSTVNVQRIGDIPCKDVYGN-VIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG

Query:  LAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSI
         AVKG FL+NK LP +T+Q+R SMIKV  D NL N  T NS+EVV TSN PK+  LS+NL+ALL+YGGVP ++F++IL++ L   + +F   RAA + ++
Subjt:  LAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSI

Query:  NNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAK
        + G++DD    +MI++GIPLDE YL++ LS LL+ EK  LK+G+L +   YYLMGT DPT  L+ DEV  + ++      VLVYRNPGLHFGDIH+L A 
Subjt:  NNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAK

Query:  YVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAK
        YV+ L   VGN+KYG+FF  KGPRS+ DEIAGGDFDGDMY++SRN +LLE+++P EPW   SP  +  T ++P+E S E LE+ELFK+FL T F PS   
Subjt:  YVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAK

Query:  SVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQ-EEVPNIE
          AAD+WLA+MD+ L LG++  +E+  ++ K+L+L +IYYDA+DAPK  G ++ +P  +K    PH+MER K ++ STSILG IFDTV+ +  E+     
Subjt:  SVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQ-EEVPNIE

Query:  VQKLPCFEDQ-VPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVT
        + KL CFED+ V +  + K K  ++ YR EM  AM  D D    +    I+KYK+  Y A   + S + LEE+  +ALA+Y+VT
Subjt:  VQKLPCFEDQ-VPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVT

O82190 Probable RNA-dependent RNA polymerase 33.5e-25048.23Show/hide
Query:  EVPLPPSVEQLLLEICMQQN-QPPPDAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSPSTCS
        E+ L  SVE +L +I  + N + P   + R  L+S+ EE AL+TL K+ ++  +++L G I++ V+          V  SP  SP   G SP QSP T  
Subjt:  EVPLPPSVEQLLLEICMQQN-QPPPDAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSPSTCS

Query:  VSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESL-EMVATADQIRSLSQLPMEKFELEVWK
             +  +CR         ++  S    TP               IP  +ALGELEF+KAFL+LSYIGGESL E V + DQIR    LPM  +E  VW 
Subjt:  VSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESL-EMVATADQIRSLSQLPMEKFELEVWK

Query:  TFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYC
          G++  + ++RR  ++ D   TH Y C+VA DGSYKFKG  L NT THL +VLGDDNVL VKF +        N L   +  Y  IA++GI++GLR+Y 
Subjt:  TFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYC

Query:  FFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDV
        FFVFKDGGKEEKKK+ +   VKCYF+R +S A +D   PY  + K++ EAR  FMH + +SS+ +YM+RFSLILSK+  L++D++ +  ++I DI C D 
Subjt:  FFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDV

Query:  YG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRT
           +V+ ++GKP IH+DGTG+ISEDLA  CP+N+FKG++    N+         Q+K L     G   +EPPLLIQFR+FYNG AVKGTFL NK+LP RT
Subjt:  YG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRT

Query:  IQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG
        +Q+R SMIKV  D  L N  T NS+EVV TSN P+K  LSRNL+ALL+YGGVP ++F+NIL + L + + +F S+RAA + +IN G  DD   A MIL G
Subjt:  IQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG

Query:  IPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIF
        IPLDE YL+ RLS LL+ E+ +LK+GR  +   YY+MGT DPT  L+ +E+CVIL +GQI+G VLVYRNPGLHFGDIHVL A YV+ L   VGNAK+ +F
Subjt:  IPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIF

Query:  FSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGI-TNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLML
        F  KGPRS+ DEIAGGDFDGDMY++SRN +LLE+F+P EPW  S     I   +KP+E S E+LE+ELFK+FL  RF       +AAD WL +MD  L L
Subjt:  FSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGI-TNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLML

Query:  GEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERG-KNSYTSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEDQ-VPDDI
        G++  +E+   +  IL+LI+IYYDALDAPKKG  K+++P  L+    PH+MER  K  + STSILG IFDTV+ +  EE P  E+ KL  FED+ VP   
Subjt:  GEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERG-KNSYTSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEDQ-VPDDI

Query:  LMKWKFHYEMYRAEMKDA-MQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
        + K+   YE YR+EM  A M+ D   +N      I++YK+  YGA   E S + LEE+  +ALA+Y+V YD+A+  G V  C+FAW VAG  L K   +K
Subjt:  LMKWKFHYEMYRAEMKDA-MQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREIFG
          ++S +   SV++++ G
Subjt:  QSERSFLCLPSVMREIFG

Q5QMN4 Probable RNA-dependent RNA polymerase 45.4e-21144.36Show/hide
Query:  PQFVALGELEFRKAFLILSYIG--------------GESLEMVATADQIRSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDG
        PQ +ALGELEFRK F+I +Y+                  +E V + D IRSL  + M +FE  +W TFG   ++  DR   +D     + +YHC V + G
Subjt:  PQFVALGELEFRKAFLILSYIG--------------GESLEMVATADQIRSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDG

Query:  SYK---FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPT--------ASAVKC
              FKGP++ N +THLQ+VLGDDNVL+VKF E +SD  +   L      Y+K+A +GI+LGLR Y FF++KDGGKE K K            S+V+C
Subjt:  SYK---FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPT--------ASAVKC

Query:  YFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGTGFISE
        YFVR ES   +D+  PY LS +T+ +AR LFMH   V ++A YM RF+LI+SK+I L +DLS V V+ I D PC D +G  ++RDG+ LIHTDGTG ISE
Subjt:  YFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGTGFISE

Query:  DLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENS
        DLA +C  +  KG+     ++   +A +          +      E PLLIQ RLFYNG AVKGT L++K+LP RTI IR SM+K++  P L   ++ NS
Subjt:  DLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENS

Query:  M---------------------EVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSGIPL
        +                     E+V TSN   +TF S NLIALL+YGGVP E+FM +L  A+ +          AL ++ N  D++D + ARMILSGIPL
Subjt:  M---------------------EVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSGIPL

Query:  DESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIFFSC
        +ESYLQ RL  L   E+K +K+G++ +  CYYLMGTADPT  L  +EVCVIL+ GQ++G VLVY+ PGLH GDIHVL A Y  ++  VVGN+K+ I F  
Subjt:  DESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIFFSC

Query:  KGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDR
         G RS+ADE+A  DFDGD+YWVS N +LLE+F+P +PW P+ +  G   K P +F+  +LE  LF  FL TRF PSYA++ AA NWL  MD+LL +  D 
Subjt:  KGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDR

Query:  KEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVN----MYQEEVPNIEVQKLPCF-EDQVPDDILM
        + E+  +  K+L+L+++YY ALDAPK  G K+ +P+ L     PHFM+R   SY S+SILG+I+D       +  + V    +  LPCF E  VP  I  
Subjt:  KEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVN----MYQEEVPNIEVQKLPCF-EDQVPDDILM

Query:  KWKFHYEMYRAE--MKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQ
         W+  Y  Y A+  +  A + D + K +  +   +KYK +LYGA E E +PR L++V  EA AIY + Y+ A S  +V  C FAW+VAG AL      K 
Subjt:  KWKFHYEMYRAE--MKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQ

Query:  SERSFLCLPSVMR
           + +C   ++R
Subjt:  SERSFLCLPSVMR

Q5QMN5 Probable RNA-dependent RNA polymerase 36.4e-21244.83Show/hide
Query:  PPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHC
        P  P  +   + +    A  PQ +AL EL FRK F++ +Y+  E +E V + D IRSL  L M +FE ++W+TFG K +   DR   +D D   T +YHC
Subjt:  PPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHC

Query:  YVALDGSYK---FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEK-------KKNPTA
         VA+ G      FKGP++ NT+THLQ+V+GDDNVL+VKF    SD  +          Y+K+A DGI+LGLR+Y FFV+KDGGKEEK        KN   
Subjt:  YVALDGSYK---FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEK-------KKNPTA

Query:  SAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGT
        S V CYFVR ES   +D+  PY LS +T+ +AR LFMH     ++A YMARF+LILSK+I    DLS V V+RI D PC D +GNV+++D +PLIHTDGT
Subjt:  SAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGT

Query:  GFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDP-----
        G +S DLAL CP ++FKG+                             L+  PLL+QFRLFYNG AVKGT L++++LP  TI IR SM+K+E  P     
Subjt:  GFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDP-----

Query:  ----------------NLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL
                        +L   ++ NS E+V TSN P++T  SR LI LL YGGVP EYF+ +L  A+   +        ALR++ +  D++D + ARMIL
Subjt:  ----------------NLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMIL

Query:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEEL-VPVVGNAKY
        SGIPL+ESYLQ+RL  + ++E+K +K G++ +  CYYLM T DPT TL  +EVCVILENGQ +G VLVY++PGLHFGDIHVL A Y+ +L    VG AKY
Subjt:  SGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEEL-VPVVGNAKY

Query:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLL
         I F   GPRS+ADE+A  DFDGD+YWVS+N +LLE+F+P EPW  +   +    KKP + +   LE  LF  FL TRF PS+A   AAD+WLA MD+LL
Subjt:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLL

Query:  MLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQE----EVPNIEVQKLPCF-EDQV
            D + E+  +  K+L+L+++YY ALDAPK  G K+ +P  L     PHFM R   SY S+SILGQI+D     +      V  I V  LPCF E + 
Subjt:  MLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQE----EVPNIEVQKLPCF-EDQV

Query:  PDDILMKWKFHYEMYRAE--MKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFK
        P      W+  YE Y  +  M     +D + +N+  +   +KYK +LY A E E + R  ++V  EA  IY + Y+ A        C FAW+VAG AL  
Subjt:  PDDILMKWKFHYEMYRAE--MKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFK

Query:  LCARKQSERSFLCLPSVMR
          A K    + LC   ++R
Subjt:  LCARKQSERSFLCLPSVMR

Arabidopsis top hitse value%identityAlignment
AT1G14790.1 RNA-dependent RNA polymerase 14.5e-1924.95Show/hide
Query:  NSMIKVEIDPNLENAETENS-MEVVGTSNHPKKTFLSRNLIALLNYGGVPREYF---MNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG
        NS  K+ +  ++   E+EN+ ++V+  S + +  +++R LI LL+  GV    F      +VD L  +         AL + +  G+  + L A ++   
Subjt:  NSMIKVEIDPNLENAETENS-MEVVGTSNHPKKTFLSRNLIALLNYGGVPREYF---MNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG

Query:  IPLDESYL-----QYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQ-------INGKVLVYRNPGLHFGDIHVLTAKYVEEL
         P  E +L      +R S LL    K+    R+ + G   +MG  D T TLE  +V V   +         I G V+V +NP LH GD+ VL A      
Subjt:  IPLDESYL-----QYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQ-------INGKVLVYRNPGLHFGDIHVLTAKYVEEL

Query:  VPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADN
        VP + +    + F  KG R   +E +G D DGD+Y+V  + +L+   R  EP   +P    I +   ++ + E++E E F  ++      + +  + A+ 
Subjt:  VPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADN

Query:  WLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMER-GKNSYTSTSILGQIFDTVNMYQEEVPNIEVQ----
          A  D         KE         ++L   +  A+D PK G   + +P+HL     P FME+  K +Y S +++G++F  V   +   P I ++    
Subjt:  WLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMER-GKNSYTSTSILGQIFDTVNMYQEEVPNIEVQ----

Query:  -----------KLPCFEDQVPDDILMKWKFHYEMYR------------------AEMKDAMQLDPDAKNVA-AEATIKKYKEILYGAEELEGSPRWLEEV
                   ++  FE+ V +    K  + +++                      M  +     DA+++  A   ++K    L+ A E E      E  
Subjt:  -----------KLPCFEDQVPDDILMKWKFHYEMYR------------------AEMKDAMQLDPDAKNVA-AEATIKKYKEILYGAEELEGSPRWLEEV

Query:  CKEALAIYHVTYDHAMSHGSV-------RYCSFAWRV
          +A A YHVTY H+   G          + SFAW V
Subjt:  CKEALAIYHVTYDHAMSHGSV-------RYCSFAWRV

AT2G19910.1 RNA-dependent RNA polymerase family protein2.5e-25148.23Show/hide
Query:  EVPLPPSVEQLLLEICMQQN-QPPPDAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSPSTCS
        E+ L  SVE +L +I  + N + P   + R  L+S+ EE AL+TL K+ ++  +++L G I++ V+          V  SP  SP   G SP QSP T  
Subjt:  EVPLPPSVEQLLLEICMQQN-QPPPDAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSPSTCS

Query:  VSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESL-EMVATADQIRSLSQLPMEKFELEVWK
             +  +CR         ++  S    TP               IP  +ALGELEF+KAFL+LSYIGGESL E V + DQIR    LPM  +E  VW 
Subjt:  VSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESL-EMVATADQIRSLSQLPMEKFELEVWK

Query:  TFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYC
          G++  + ++RR  ++ D   TH Y C+VA DGSYKFKG  L NT THL +VLGDDNVL VKF +        N L   +  Y  IA++GI++GLR+Y 
Subjt:  TFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYC

Query:  FFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDV
        FFVFKDGGKEEKKK+ +   VKCYF+R +S A +D   PY  + K++ EAR  FMH + +SS+ +YM+RFSLILSK+  L++D++ +  ++I DI C D 
Subjt:  FFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDV

Query:  YG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRT
           +V+ ++GKP IH+DGTG+ISEDLA  CP+N+FKG++    N+         Q+K L     G   +EPPLLIQFR+FYNG AVKGTFL NK+LP RT
Subjt:  YG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRT

Query:  IQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG
        +Q+R SMIKV  D  L N  T NS+EVV TSN P+K  LSRNL+ALL+YGGVP ++F+NIL + L + + +F S+RAA + +IN G  DD   A MIL G
Subjt:  IQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSG

Query:  IPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIF
        IPLDE YL+ RLS LL+ E+ +LK+GR  +   YY+MGT DPT  L+ +E+CVIL +GQI+G VLVYRNPGLHFGDIHVL A YV+ L   VGNAK+ +F
Subjt:  IPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIF

Query:  FSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGI-TNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLML
        F  KGPRS+ DEIAGGDFDGDMY++SRN +LLE+F+P EPW  S     I   +KP+E S E+LE+ELFK+FL  RF       +AAD WL +MD  L L
Subjt:  FSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGI-TNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLML

Query:  GEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERG-KNSYTSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEDQ-VPDDI
        G++  +E+   +  IL+LI+IYYDALDAPKKG  K+++P  L+    PH+MER  K  + STSILG IFDTV+ +  EE P  E+ KL  FED+ VP   
Subjt:  GEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERG-KNSYTSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEDQ-VPDDI

Query:  LMKWKFHYEMYRAEMKDA-MQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK
        + K+   YE YR+EM  A M+ D   +N      I++YK+  YGA   E S + LEE+  +ALA+Y+V YD+A+  G V  C+FAW VAG  L K   +K
Subjt:  LMKWKFHYEMYRAEMKDA-MQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARK

Query:  QSERSFLCLPSVMREIFG
          ++S +   SV++++ G
Subjt:  QSERSFLCLPSVMREIFG

AT2G19920.1 RNA-dependent RNA polymerase family protein4.4e-22444.51Show/hide
Query:  SLHYSISLKAFAMADQFQEVPLPPSVEQLLLEICMQQNQPPP-DAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPH
        ++ Y+ S + F+    + E+ L  SVE +L ++  + N  PP   + R  L+S+ EE AL+TL K+ +   V++L G I++ + +         +W    
Subjt:  SLHYSISLKAFAMADQFQEVPLPPSVEQLLLEICMQQNQPPP-DAKVRLALASLGEEAALDTLHKISSRA-VRSLGGFILHMVRNDPCTPQKKMVWVSPH

Query:  QSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQI
             SG SP Q P T          +CR        +    S     P           +  +I   +ALGELEF+KAFL+L+Y+GG+SL  V + D+I
Subjt:  QSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQI

Query:  RSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYA
        R    LPM  +E  VW   G+      + R+ ++ D  +TH Y C+VA DGSY+ KG FL NT THL +VLGDDNVL V+F +   +   + +    +  
Subjt:  RSLSQLPMEKFELEVWKTFGEKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYA

Query:  YNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKID
        Y +IA++GI++GLR+Y FFVFKDGGK EKKK  +   VKCYF+R  S A  D   PY LS  ++ EAR  FMH H + S A+YMARFSLILSK+  L++D
Subjt:  YNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKID

Query:  LSTVNVQRIGDIPCKDVYGN-VIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG
        ++ + V +I DI C D   N V+ ++GKP IH+DGTG+ISEDLA  CP+N+FKG++    N++                  G  ++EPPLLIQ R+F +G
Subjt:  LSTVNVQRIGDIPCKDVYGN-VIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNG

Query:  LAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSI
         AVKG FL+NK LP +T+Q+R SMIKV  D NL N  T NS+EVV TSN PK+  LS+NL+ALL+YGGVP ++F++IL++ L   + +F   RAA + ++
Subjt:  LAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSI

Query:  NNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAK
        + G++DD    +MI++GIPLDE YL++ LS LL+ EK  LK+G+L +   YYLMGT DPT  L+ DEV  + ++      VLVYRNPGLHFGDIH+L A 
Subjt:  NNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAK

Query:  YVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAK
        YV+ L   VGN+KYG+FF  KGPRS+ DEIAGGDFDGDMY++SRN +LLE+++P EPW   SP  +  T ++P+E S E LE+ELFK+FL T F PS   
Subjt:  YVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAK

Query:  SVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQ-EEVPNIE
          AAD+WLA+MD+ L LG++  +E+  ++ K+L+L +IYYDA+DAPK  G ++ +P  +K    PH+MER K ++ STSILG IFDTV+ +  E+     
Subjt:  SVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQ-EEVPNIE

Query:  VQKLPCFEDQ-VPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVT
        + KL CFED+ V +  + K K  ++ YR EM  AM  D D    +    I+KYK+  Y A   + S + LEE+  +ALA+Y+VT
Subjt:  VQKLPCFEDQ-VPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVT

AT2G19930.1 RNA-dependent RNA polymerase family protein2.3e-24949.29Show/hide
Query:  PSTCRVYSPQGLGTT----ERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFG
        P      SP G   +    E  S     P      S       +IPQ VALGELEF+K FL+LSYI G+ +  V TAD+IR    LPM ++E  VW   G
Subjt:  PSTCRVYSPQGLGTT----ERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFG

Query:  EKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFK------GPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR
             ++DRR+ + WD  +TH Y C VA +GSY FK      GP L +T THL +VLGDDNVL VKFA+    + S+ +    ++ Y  IA++GI++GLR
Subjt:  EKCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFK------GPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLR

Query:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC
        +Y FFVFKDGGKEEKKK+ +   VKCYF+R +S A+ D   PY L+ K+++EAR  FMH H   ++A+YMARFSLILSK+  L++D++ +   +I DI C
Subjt:  QYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPC

Query:  KDVYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLP
         D  G +V+ ++ KP IH+DGTG+ISEDLA  CP+N+FKG+             E  Q    Q         +PPLLIQFR+FY+G AVKGTFL+NK+L 
Subjt:  KDVYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLP

Query:  SRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMI
         RT+Q+R SMIKV  DP+L N  T N++EVV TSN PK+T LS+NL+ALL+YGG+P E+F++IL++ L + + +F +KRAAL  ++N G++DD   A+MI
Subjt:  SRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMI

Query:  LSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY
        L GIPLDE +L+  LS+LL+ EK  LK+G+L V   YYLMGT DPT  L+ DEVCVILE+GQI+G+VLVYRNPGLHFGDIH+L A YV+ L   VGN+K+
Subjt:  LSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKY

Query:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQL
         +FF  KGPRS+ DEIAGGDFDGDMY++SRN +LLE F+P EPW   +P  +  + + P++ S E+LE+ELF++FLT  F  S    +AAD+WL +MD+ 
Subjt:  GIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPW-RPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQL

Query:  LMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMY--QEEVPNIEVQKLPCFEDQ-VP
        L+LG+DR EE+  ++ K+L+LI+IYYDALDAPKK G K+ +P  LK    PH+MER K  + STSILG IFD V     +E  P+ E+ KLPCFED+ V 
Subjt:  LMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMY--QEEVPNIEVQKLPCFEDQ-VP

Query:  DDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKL-C
        +  + K +  Y+ YR EM  AM+ D   K+ +A   I++YK+  YGA   E S + LEE+  +ALA+Y + YD+A+ H  V  C F W+VAG  L +   
Subjt:  DDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKL-C

Query:  ARKQSERSFLCLPSVMREIFG
         +K  E+  +C PSV++E++G
Subjt:  ARKQSERSFLCLPSVMREIFG

AT4G11130.1 RNA-dependent RNA polymerase 21.4e-2525.3Show/hide
Query:  FRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKR
        F++ Y G   KG   +++    R + +R+SM+K          ++ N M  V         FL+R +I LL+  G+    F  +    LS +  +   + 
Subjt:  FRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKR

Query:  AALRVSIN-NGDLDDFLVARMILSG-IPLDESYLQYRLSMLLREEKKSLKSG-RLHVPGCYYLMGTADPTCTLESDEVCVIL------------------
        AAL V    +G+    L+ +M+L G  P  E YL   L +    +   LKS  R+ VP    L+G  D    LE  +V V +                  
Subjt:  AALRVSIN-NGDLDDFLVARMILSG-IPLDESYLQYRLSMLLREEKKSLKSG-RLHVPGCYYLMGTADPTCTLESDEVCVIL------------------

Query:  --ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNK
          E   + GKV+V +NP LH GDI VL A Y  E+          I F  KG R   +E +GGD DGD ++VS + +++       P    P M+     
Subjt:  --ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNK

Query:  KPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMER-
        +P     +   +E+ K F+               + L ++    ++  DR  E+ R + K L+L N++  A+D  K G    E+P  LK    P F+ER 
Subjt:  KPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMER-

Query:  GKNSYTSTSILGQIFDTV-NMYQEEVPNIEVQKLPCF----EDQVPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE------------
         K +Y S S+ G+++  V +   +  P  E +    +    E+   +  +   K H +MY  ++   M     A        I K KE            
Subjt:  GKNSYTSTSILGQIFDTV-NMYQEEVPNIEVQKLPCF----EDQVPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKE------------

Query:  ----ILYGAEEL-EGSPRWLEEVCKE-------ALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSERS
            I    ++L + +  W E+ C++       A A Y+VTY+       + + SF W + G  L  + A     +S
Subjt:  ----ILYGAEEL-EGSPRWLEEVCKE-------ALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSERS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAGTCTGCATTACAGCATTAGTTTGAAAGCTTTTGCGATGGCCGATCAATTTCAGGAAGTTCCTCTTCCACCGTCCGTTGAGCAGTTGCTTCTTGAAATATGTATGCA
ACAGAACCAGCCACCGCCTGATGCCAAAGTGCGACTGGCGTTAGCTTCATTGGGTGAAGAAGCAGCTCTTGATACTCTCCACAAAATCTCCTCACGCGCTGTTAGGAGCC
TTGGCGGGTTCATCCTGCATATGGTTCGTAATGATCCTTGTACTCCTCAGAAGAAGATGGTTTGGGTTTCTCCGCACCAGAGTCCTTCCTCTTCCGGCGTTTCTCCGTTT
CAAAGTCCTTCGACTTGCTCCGTTTCTCCGCATCAAAGTCCTTCAACTTGCCGCGTTTATAGCCCTCAAGGGTTAGGGACTACTGAGAGAACAAGCTTTCAGCCGCCGAC
TCCAGAAAAATCCGGAAGTTTTTCGTCTTCGGTTTCAGATAGAGCAAACATTCCACAATTTGTGGCGCTGGGAGAACTCGAGTTCAGAAAAGCGTTTCTAATATTGAGTT
ACATTGGAGGAGAAAGTCTTGAAATGGTCGCAACAGCAGACCAAATTCGAAGTCTGAGCCAGTTACCGATGGAAAAGTTCGAGCTTGAAGTTTGGAAAACATTTGGTGAA
AAATGTGTTAATAAGGAAGACCGCCGAGTGTATGTTGATTGGGATCGTAGGAGAACACACATCTATCACTGTTATGTTGCATTAGATGGGAGTTACAAGTTCAAGGGCCC
ATTTTTGAACAATACAAAAACTCATCTGCAAAGGGTGTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCGGAAGACACATCTGATAGATGTTCAACAAACCATCTTG
GTGGTTCCTTTTATGCTTATAACAAGATCGCTAGAGATGGAATCCTTCTTGGATTGCGTCAGTATTGTTTTTTTGTTTTCAAAGATGGTGGCAAGGAGGAAAAAAAGAAG
AATCCAACCGCATCAGCAGTGAAGTGTTACTTTGTCCGAATGGAGTCAGATGCATATCTTGATAAGATTAGACCTTATAAATTATCAAATAAAACTCTTTTTGAAGCTAG
GAGTCTTTTCATGCATGCACATATGGTGTCTAGTGTAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCAAAGAGCATAAACCTCAAAATTGATTTATCTACAGTTA
ATGTTCAAAGAATCGGGGATATACCGTGCAAAGATGTCTATGGTAATGTCATCTATAGAGATGGAAAACCTCTTATACATACAGATGGAACAGGATTTATATCGGAGGAC
TTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATCCCAACCTTAAGAGATTTTCCGCCTTTGAAGAGTTCCAGAATAAGACTTTACAACTGAC
ACTGCCAGGACTTGAACTGCGGGAACCACCCTTGCTAATTCAGTTCCGACTTTTTTACAACGGTCTTGCTGTTAAAGGAACATTTCTAATTAATAAACAGCTTCCTTCTA
GAACAATTCAAATCCGCAATTCTATGATTAAAGTTGAAATAGATCCAAATCTTGAAAATGCCGAAACAGAGAATTCAATGGAGGTAGTAGGGACCAGTAATCATCCAAAG
AAGACATTTCTTTCAAGAAACTTAATAGCACTTCTGAACTATGGAGGTGTCCCAAGAGAGTATTTCATGAATATCCTTGTGGATGCTTTGAGCGATGTTCAGGGTGTTTT
CTCTAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAACGGCGATTTGGATGACTTCCTAGTTGCAAGAATGATTTTATCTGGAATTCCTCTTGATGAATCATATTTGC
AATATCGATTGTCTATGCTGCTGAGGGAGGAGAAAAAGAGCTTGAAAAGTGGAAGGCTTCACGTGCCTGGATGTTATTATTTAATGGGGACAGCTGATCCTACCTGTACT
CTTGAAAGCGATGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTTCTTGTTTATCGCAATCCTGGACTACATTTTGGTGATATCCATGTTTTAACGGC
TAAATATGTGGAGGAATTGGTACCTGTAGTGGGAAATGCAAAATATGGTATATTCTTCTCTTGCAAGGGTCCCCGTTCCGTGGCTGATGAAATAGCTGGTGGTGATTTTG
ATGGTGATATGTACTGGGTTTCGAGAAATTCTCAATTGTTAGAGTATTTCAGACCAGGTGAACCTTGGAGGCCAAGTCCTTCAATGGAAGGAATAACTAATAAAAAGCCA
AATGAATTTTCTGCTGAGGACCTAGAGGATGAGCTATTTAAATTATTCTTGACAACTAGGTTTCAGCCGAGTTATGCTAAGAGTGTTGCAGCTGACAACTGGCTGGCTTT
AATGGATCAATTACTAATGCTGGGTGAAGATCGTAAAGAAGAAAGAAATCGTGTAAGGGCAAAGATTCTCCAGTTGATCAATATATATTATGATGCTTTAGATGCACCTA
AAAAAGGCGGGAAAAAGATAGAAGTTCCAAAACACCTAAAGGCGGGAACTTTGCCACATTTCATGGAAAGGGGAAAAAATTCATATACATCAACTTCAATTCTTGGACAA
ATTTTTGATACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAGAAACTTCCTTGCTTTGAAGATCAAGTGCCGGATGATATCTTGATGAAGTGGAAGTT
CCACTATGAGATGTACCGAGCCGAGATGAAAGATGCCATGCAGCTTGATCCTGATGCCAAAAACGTAGCCGCTGAAGCAACCATTAAAAAGTACAAGGAGATATTATATG
GTGCCGAAGAGCTCGAGGGTAGCCCCAGATGGTTGGAGGAAGTATGCAAGGAAGCTCTTGCAATTTATCACGTCACATATGACCATGCCATGAGCCATGGCAGTGTGCGC
TATTGCAGCTTTGCGTGGAGAGTTGCAGGTTCAGCTCTCTTCAAGCTCTGTGCCAGAAAACAATCCGAAAGGAGCTTTCTTTGTCTCCCTTCAGTTATGCGTGAGATTTT
TGGT
mRNA sequenceShow/hide mRNA sequence
AGAAGTCTGCATTACAGCATTAGTTTGAAAGCTTTTGCGATGGCCGATCAATTTCAGGAAGTTCCTCTTCCACCGTCCGTTGAGCAGTTGCTTCTTGAAATATGTATGCA
ACAGAACCAGCCACCGCCTGATGCCAAAGTGCGACTGGCGTTAGCTTCATTGGGTGAAGAAGCAGCTCTTGATACTCTCCACAAAATCTCCTCACGCGCTGTTAGGAGCC
TTGGCGGGTTCATCCTGCATATGGTTCGTAATGATCCTTGTACTCCTCAGAAGAAGATGGTTTGGGTTTCTCCGCACCAGAGTCCTTCCTCTTCCGGCGTTTCTCCGTTT
CAAAGTCCTTCGACTTGCTCCGTTTCTCCGCATCAAAGTCCTTCAACTTGCCGCGTTTATAGCCCTCAAGGGTTAGGGACTACTGAGAGAACAAGCTTTCAGCCGCCGAC
TCCAGAAAAATCCGGAAGTTTTTCGTCTTCGGTTTCAGATAGAGCAAACATTCCACAATTTGTGGCGCTGGGAGAACTCGAGTTCAGAAAAGCGTTTCTAATATTGAGTT
ACATTGGAGGAGAAAGTCTTGAAATGGTCGCAACAGCAGACCAAATTCGAAGTCTGAGCCAGTTACCGATGGAAAAGTTCGAGCTTGAAGTTTGGAAAACATTTGGTGAA
AAATGTGTTAATAAGGAAGACCGCCGAGTGTATGTTGATTGGGATCGTAGGAGAACACACATCTATCACTGTTATGTTGCATTAGATGGGAGTTACAAGTTCAAGGGCCC
ATTTTTGAACAATACAAAAACTCATCTGCAAAGGGTGTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCGGAAGACACATCTGATAGATGTTCAACAAACCATCTTG
GTGGTTCCTTTTATGCTTATAACAAGATCGCTAGAGATGGAATCCTTCTTGGATTGCGTCAGTATTGTTTTTTTGTTTTCAAAGATGGTGGCAAGGAGGAAAAAAAGAAG
AATCCAACCGCATCAGCAGTGAAGTGTTACTTTGTCCGAATGGAGTCAGATGCATATCTTGATAAGATTAGACCTTATAAATTATCAAATAAAACTCTTTTTGAAGCTAG
GAGTCTTTTCATGCATGCACATATGGTGTCTAGTGTAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCAAAGAGCATAAACCTCAAAATTGATTTATCTACAGTTA
ATGTTCAAAGAATCGGGGATATACCGTGCAAAGATGTCTATGGTAATGTCATCTATAGAGATGGAAAACCTCTTATACATACAGATGGAACAGGATTTATATCGGAGGAC
TTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATCCCAACCTTAAGAGATTTTCCGCCTTTGAAGAGTTCCAGAATAAGACTTTACAACTGAC
ACTGCCAGGACTTGAACTGCGGGAACCACCCTTGCTAATTCAGTTCCGACTTTTTTACAACGGTCTTGCTGTTAAAGGAACATTTCTAATTAATAAACAGCTTCCTTCTA
GAACAATTCAAATCCGCAATTCTATGATTAAAGTTGAAATAGATCCAAATCTTGAAAATGCCGAAACAGAGAATTCAATGGAGGTAGTAGGGACCAGTAATCATCCAAAG
AAGACATTTCTTTCAAGAAACTTAATAGCACTTCTGAACTATGGAGGTGTCCCAAGAGAGTATTTCATGAATATCCTTGTGGATGCTTTGAGCGATGTTCAGGGTGTTTT
CTCTAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAACGGCGATTTGGATGACTTCCTAGTTGCAAGAATGATTTTATCTGGAATTCCTCTTGATGAATCATATTTGC
AATATCGATTGTCTATGCTGCTGAGGGAGGAGAAAAAGAGCTTGAAAAGTGGAAGGCTTCACGTGCCTGGATGTTATTATTTAATGGGGACAGCTGATCCTACCTGTACT
CTTGAAAGCGATGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTTCTTGTTTATCGCAATCCTGGACTACATTTTGGTGATATCCATGTTTTAACGGC
TAAATATGTGGAGGAATTGGTACCTGTAGTGGGAAATGCAAAATATGGTATATTCTTCTCTTGCAAGGGTCCCCGTTCCGTGGCTGATGAAATAGCTGGTGGTGATTTTG
ATGGTGATATGTACTGGGTTTCGAGAAATTCTCAATTGTTAGAGTATTTCAGACCAGGTGAACCTTGGAGGCCAAGTCCTTCAATGGAAGGAATAACTAATAAAAAGCCA
AATGAATTTTCTGCTGAGGACCTAGAGGATGAGCTATTTAAATTATTCTTGACAACTAGGTTTCAGCCGAGTTATGCTAAGAGTGTTGCAGCTGACAACTGGCTGGCTTT
AATGGATCAATTACTAATGCTGGGTGAAGATCGTAAAGAAGAAAGAAATCGTGTAAGGGCAAAGATTCTCCAGTTGATCAATATATATTATGATGCTTTAGATGCACCTA
AAAAAGGCGGGAAAAAGATAGAAGTTCCAAAACACCTAAAGGCGGGAACTTTGCCACATTTCATGGAAAGGGGAAAAAATTCATATACATCAACTTCAATTCTTGGACAA
ATTTTTGATACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAGAAACTTCCTTGCTTTGAAGATCAAGTGCCGGATGATATCTTGATGAAGTGGAAGTT
CCACTATGAGATGTACCGAGCCGAGATGAAAGATGCCATGCAGCTTGATCCTGATGCCAAAAACGTAGCCGCTGAAGCAACCATTAAAAAGTACAAGGAGATATTATATG
GTGCCGAAGAGCTCGAGGGTAGCCCCAGATGGTTGGAGGAAGTATGCAAGGAAGCTCTTGCAATTTATCACGTCACATATGACCATGCCATGAGCCATGGCAGTGTGCGC
TATTGCAGCTTTGCGTGGAGAGTTGCAGGTTCAGCTCTCTTCAAGCTCTGTGCCAGAAAACAATCCGAAAGGAGCTTTCTTTGTCTCCCTTCAGTTATGCGTGAGATTTT
TGGT
Protein sequenceShow/hide protein sequence
RSLHYSISLKAFAMADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPF
QSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTPEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFGE
KCVNKEDRRVYVDWDRRRTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEKKK
NPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGTGFISED
LALECPMNVFKGQAKHDPNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAETENSMEVVGTSNHPK
KTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCT
LESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYGIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKP
NEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQ
IFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVR
YCSFAWRVAGSALFKLCARKQSERSFLCLPSVMREIFG