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MS003895 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003895
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein CYPRO4
Genome locationscaffold127:1372605..1372790
RNA-Seq ExpressionMS003895
SyntenyMS003895
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576955.1 Protein CYPRO4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0956.52Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+ N VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

KAG7014976.1 Protein CYPRO4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0956.52Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+ N VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

XP_022149230.1 protein CYPRO4 [Momordica charantia]3.2e-1571.01Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDVKA-------NYASSSPSQLPNSKNDVKFFLHVGGNT
        E+ +EYEDAEKELR QSIS AKSTGNPPPIDDV+A        Y SSSPSQ+PNSKN VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDVKA-------NYASSSPSQLPNSKNDVKFFLHVGGNT

XP_022922790.1 protein CYPRO4-like [Cucurbita moschata]1.5e-0956.52Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+ N VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

XP_023552532.1 protein CYPRO4-like [Cucurbita pepo subsp. pepo]4.1e-1057.97Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+KN VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

TrEMBL top hitse value%identityAlignment
A0A0A0LAA1 VID27 domain-containing protein9.1e-0856.76Show/hide
Query:  EEDEEYEDAEKELRLQSIS-RAKSTGNPPPIDDV-------KANYASS----SPSQLPNSKNDVKFFLHVGGNT
        +++EEYEDA+KEL+  SIS  AKSTG    IDDV       K  Y SS    SPSQ PNSKN VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSIS-RAKSTGNPPPIDDV-------KANYASS----SPSQLPNSKNDVKFFLHVGGNT

A0A5D3DQK8 Protein CYPRO41.3e-0651.32Show/hide
Query:  EEDEEYEDAEKELRLQSIS-RAKSTGNPPPIDDV-------KANYASS------SPSQLPNSKNDVKFFLHVGGNT
        +++EEY+DA+KEL+  S+S  AKSTG    IDDV       K  Y SS      SPS+ PNSKN VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSIS-RAKSTGNPPPIDDV-------KANYASS------SPSQLPNSKNDVKFFLHVGGNT

A0A6J1D560 protein CYPRO41.6e-1571.01Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDVKA-------NYASSSPSQLPNSKNDVKFFLHVGGNT
        E+ +EYEDAEKELR QSIS AKSTGNPPPIDDV+A        Y SSSPSQ+PNSKN VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDVKA-------NYASSSPSQLPNSKNDVKFFLHVGGNT

A0A6J1E9T2 protein CYPRO4-like7.5e-1056.52Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+ N VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

A0A6J1JB96 protein CYPRO4-like7.5e-1056.52Show/hide
Query:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT
        +E+EEYEDA++ L+ QSIS AKSTG    +DDV       K  Y SSSPSQ+PN+ N VK +LH+GGNT
Subjt:  EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDV-------KANYASSSPSQLPNSKNDVKFFLHVGGNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAAGATGAAGAATATGAAGACGCTGAGAAAGAATTGAGGCTGCAATCAATATCTAGAGCTAAATCAACCGGTAATCCACCTCCAATCGACGATGTAAAGGCCAATTA
TGCCTCTTCTTCCCCTTCTCAGTTACCTAATTCCAAGAACGATGTCAAATTTTTCCTTCATGTCGGAGGAAACACC
mRNA sequenceShow/hide mRNA sequence
GAAGAAGATGAAGAATATGAAGACGCTGAGAAAGAATTGAGGCTGCAATCAATATCTAGAGCTAAATCAACCGGTAATCCACCTCCAATCGACGATGTAAAGGCCAATTA
TGCCTCTTCTTCCCCTTCTCAGTTACCTAATTCCAAGAACGATGTCAAATTTTTCCTTCATGTCGGAGGAAACACC
Protein sequenceShow/hide protein sequence
EEDEEYEDAEKELRLQSISRAKSTGNPPPIDDVKANYASSSPSQLPNSKNDVKFFLHVGGNT