; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003916 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003916
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytidine deaminase
Genome locationscaffold127:1537688..1538590
RNA-Seq ExpressionMS003916
SyntenyMS003916
Gene Ontology termsGO:0009972 - cytidine deamination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0004126 - cytidine deaminase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0047844 - deoxycytidine deaminase activity (molecular function)
InterPro domainsIPR002125 - Cytidine and deoxycytidylate deaminase domain
IPR006263 - Cytidine deaminase, homodimeric
IPR013171 - Cytidine/deoxycytidylate deaminase, zinc-binding domain
IPR016192 - APOBEC/CMP deaminase, zinc-binding
IPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450845.1 PREDICTED: cytidine deaminase 1-like [Cucumis melo]1.6e-13181.4Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAE++AK+S +TIP LLP+LVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
        AAPCGHCRQFLQEVR+AAEIKILV+   ++S+  D++PLPQFLPHRFGPYDLLAKDVPLLLEPR NGLSLP+E+AGN  LCNG H      EKLKRAAL+
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI
        AAN SHAPYS+CPSGVALMD +GRIY G YMESAAYNPSMGPVQ+A+VAY+A GGG GYE+IVAAVLVEK+GVEVKQE  ARLLL+ ISPECEF V HCI
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI

Query:  A
        A
Subjt:  A

XP_022961088.1 cytidine deaminase 1-like [Cucurbita moschata]1.0e-13884.77Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAESMAK+SG+TIP LLPSLVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN ES L  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL
        AAPCGHCRQFLQEVR+AAEIKILV+SIE   ++S D++PLPQFLPHRFGPYDLL KDVPLLLEPR NGLSL DE+A N TLCNG H   + WEKLKRAAL
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL

Query:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC
        +AAN SHAPYSRCPSGVAL+D DG+IYKGSYMESAAYNPSMGPVQ+A+V+YVA GGGGGYE+IVAAVLVEK+GV+VKQEHTARLLLQ ISPECEFRV HC
Subjt:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC

Query:  IA
        +A
Subjt:  IA

XP_022987806.1 cytidine deaminase 1-like [Cucurbita maxima]1.7e-14186.09Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAESMAK+SG+TIP LLPSLVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL
        AAPCGHCRQFLQEVR+AAEIKILV+SIE   ++S D++PLPQFLPHRFGPYDLL KDVPLLLEPR NGLSL DE+AGN TLCNG H   + WEKLKRAAL
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL

Query:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC
        +AAN SHAPYSRCPSGVALMDADG+IYKGSYMESAAYNPSMGPVQ+A+V+YVA GGGGGYE+IVAAVLVEK+GV+VKQEHTARLLLQ ISPECEFRV HC
Subjt:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC

Query:  IA
        +A
Subjt:  IA

XP_023516485.1 cytidine deaminase 1-like [Cucurbita pepo subsp. pepo]8.5e-13884.11Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAESMAK+SG+TIP LLPSLVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL
        AAPCGHCRQFLQEV +AAEIKILV+SIE   ++S D++PLPQFLPHRFGPYDLL KDVPL+LEPR NGLSL DE+A N TLCNG H   + WEKLKRAAL
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL

Query:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC
        +AAN SHAPYSRCPSGVAL+D DG+IYKGSYMESAAYNPSMGPVQ+A+V+YVA GGGGGYE+IVAAVLVEK+GV+VKQE TARLLLQ ISPECEFRV HC
Subjt:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC

Query:  IA
        +A
Subjt:  IA

XP_023530323.1 cytidine deaminase 1-like [Cucurbita pepo subsp. pepo]3.8e-13082.39Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEA EAESMAKKSGI IPQLLPSLV+SAQ LARPPISK+HVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLV NLALN ES L  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE--NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
        AAPCGHCRQFLQEVRAAAEIKI V+SIE  ++S D++PLP+ LPHRFGP DLL K +PL+LEPR NGLSLPDE+AGN    NG       WEKL+RAAL 
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE--NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI
        AAN SHAPYS+CPSGVA+MDADGRIYKG YMESAAYNPSMGPVQ+AV+AYV+ GGG GYEKIVAAVLVEKEG+EVKQEHTARLLLQVISP CEFRV HCI
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A1S3BQV2 Cytidine deaminase7.5e-13281.4Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAE++AK+S +TIP LLP+LVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
        AAPCGHCRQFLQEVR+AAEIKILV+   ++S+  D++PLPQFLPHRFGPYDLLAKDVPLLLEPR NGLSLP+E+AGN  LCNG H      EKLKRAAL+
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI
        AAN SHAPYS+CPSGVALMD +GRIY G YMESAAYNPSMGPVQ+A+VAY+A GGG GYE+IVAAVLVEK+GVEVKQE  ARLLL+ ISPECEF V HCI
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI

Query:  A
        A
Subjt:  A

A0A5D3CE07 Cytidine deaminase7.5e-13281.4Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAE++AK+S +TIP LLP+LVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
        AAPCGHCRQFLQEVR+AAEIKILV+   ++S+  D++PLPQFLPHRFGPYDLLAKDVPLLLEPR NGLSLP+E+AGN  LCNG H      EKLKRAAL+
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIENESE--DFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI
        AAN SHAPYS+CPSGVALMD +GRIY G YMESAAYNPSMGPVQ+A+VAY+A GGG GYE+IVAAVLVEK+GVEVKQE  ARLLL+ ISPECEF V HCI
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI

Query:  A
        A
Subjt:  A

A0A6J1E9M2 Cytidine deaminase5.4e-13082.72Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEA EAESMAKKSGI IPQLLPSLV+SAQ LARPPISK+HVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLV NLALN ES L  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE--NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
        AAPCGHCRQFLQEVRAAAEIKI V+SIE  ++S D++PLP+ LPHRFGP DLL K +PL+LEPR NGLSLPDE+AGN    NG       WE LKRAAL 
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE--NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI
        AAN SHAPYS+CPSGVALMDADGRIYKG YMESAAYNPSMGPVQ+AV+AYV+ GGG GYE IVAAVLVEKEGVEVKQEHTARLLLQVISP CEFRV HCI
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCI

Query:  A
        A
Subjt:  A

A0A6J1HAV6 Cytidine deaminase4.9e-13984.77Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAESMAK+SG+TIP LLPSLVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN ES L  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL
        AAPCGHCRQFLQEVR+AAEIKILV+SIE   ++S D++PLPQFLPHRFGPYDLL KDVPLLLEPR NGLSL DE+A N TLCNG H   + WEKLKRAAL
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL

Query:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC
        +AAN SHAPYSRCPSGVAL+D DG+IYKGSYMESAAYNPSMGPVQ+A+V+YVA GGGGGYE+IVAAVLVEK+GV+VKQEHTARLLLQ ISPECEFRV HC
Subjt:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC

Query:  IA
        +A
Subjt:  IA

A0A6J1JFD6 Cytidine deaminase8.0e-14286.09Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MDGPRFVIEASEAESMAK+SG+TIP LLPSLVKSAQ+LARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN ESHL  LAVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL
        AAPCGHCRQFLQEVR+AAEIKILV+SIE   ++S D++PLPQFLPHRFGPYDLL KDVPLLLEPR NGLSL DE+AGN TLCNG H   + WEKLKRAAL
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIE---NESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAAL

Query:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC
        +AAN SHAPYSRCPSGVALMDADG+IYKGSYMESAAYNPSMGPVQ+A+V+YVA GGGGGYE+IVAAVLVEK+GV+VKQEHTARLLLQ ISPECEFRV HC
Subjt:  EAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHC

Query:  IA
        +A
Subjt:  IA

SwissProt top hitse value%identityAlignment
O65571 Cytidine deaminase 23.4e-6549.17Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----
        +FV  A+E    A   G+T P  LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN++FPGLPLHHS+HAEQFLVTNLALN E  L  LAV+    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----

Query:  ----AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAA
              PCG+C QFL E+  A ++KIL +  ++E+  F  L   LP      ++L K  P LLE R N L+L           + G   +     LKR A
Subjt:  ----AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAA

Query:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH
        L AAN S +PY+  PSGVAL+D DG  Y+G Y+ES A NPS+GPVQ+A+V +VA   G  + KIV AVLVEK    V QE TA+++L  I+P C+F+V H
Subjt:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH

Query:  C
        C
Subjt:  C

O65896 Cytidine deaminase 12.9e-10464.59Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MD P FVI++ EAES AK+ G+++ QLLPSLVK AQ+ AR PISK++V  VGLGSSGR+F GVN+EFP LPLHHS+HAEQFLVTNL LNGE HL   AVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIEN--------ESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKL
        AAPCGHCRQFLQE+R A EIKIL+    N        +S+ F+ L  FLPHRFGP DLL KD PLLLE   N L + D      ++CNG   ++A    L
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIEN--------ESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKL

Query:  KRAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEF
        K+ AL AAN S+APYS CPSGV+L+D DG++Y+G YMESAAYNPSMGPVQ+A+V YVA GGGGGYE+IV AVLVEKE   V+QEHTARLLL+ ISP+CEF
Subjt:  KRAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEF

Query:  RVAHC
        +V HC
Subjt:  RVAHC

Q9SU86 Cytidine deaminase 65.9e-7350.83Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----
        +FV   SE    A + G+  P  LP L+  A +LAR P+S + VGAVGL SSG VF GVN+EFP LPLHH++HAEQFLVTNLALN    L  +AVS    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----

Query:  --AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSL--PDETAGNPTLCNGGHAAAAGWEKLKRAA
           APCGHCRQF QE+R A EI+IL+   ++  ++F+ L   +P RFGP  +L +D  LLLE R N L L  P+E   +P  C+            K  A
Subjt:  --AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSL--PDETAGNPTLCNGGHAAAAGWEKLKRAA

Query:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH
        L AAN+S+APYS+CPSGVAL+   G +YKG Y+ES AYNPS+GPV++A+V +VA GGG  + +I   VLVE + V+V QE TAR  L  I+P+C+F+V H
Subjt:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH

Query:  C
        C
Subjt:  C

Q9SU87 Cytidine deaminase 78.4e-7251.15Show/hide
Query:  DGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS-
        D  +FV  A EA S     G+T P  LP L++ A +LAR PISKY VGAVG  SSGRV+ GVN+EFPGLPLHHS+H EQFLVTNLALN E  L+ LAV+ 
Subjt:  DGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS-

Query:  -------AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLK
                APCG+CRQFL E     +IKIL+ S       F  L   LP+RF P D+L K  PLLLE R N L+L   T             ++    LK
Subjt:  -------AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLK

Query:  RAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVI-SPECEF
          AL AAN S +PY+  PSGVAL D +G+ Y+G Y+ES AY+PS+GPVQ+A+V +VA   G G+ KIV AVLVEK    V QE TA+++L  I +P C+F
Subjt:  RAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVI-SPECEF

Query:  RVAHC
        +V HC
Subjt:  RVAHC

Q9XEX4 Cytidine deaminase 81.4e-5344Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVSA---
        RF++   E ES     G   PQ L  L+  A    R  IS   V AVG GSSGR FFGVN+E PGLPL HS+HAEQFL+ NLAL+ E  L+ +A+S    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVSA---

Query:  ---APCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
            PCGHC Q L ++R  ++ KIL+ +   +   ++ L  FLP       +   +VP LLE   N + L + +          H        L   AL+
Subjt:  ---APCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVIS-PECEFRVAHC
        AA  S+AP S+CPSGVAL+D  G++Y G YMES A+N S+GPVQ+A+V +VA G G  ++ IV AVLVEK+   + QE TAR++L+ I+ P+C FRV HC
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVIS-PECEFRVAHC

Arabidopsis top hitse value%identityAlignment
AT2G19570.1 cytidine deaminase 12.0e-10564.59Show/hide
Query:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS
        MD P FVI++ EAES AK+ G+++ QLLPSLVK AQ+ AR PISK++V  VGLGSSGR+F GVN+EFP LPLHHS+HAEQFLVTNL LNGE HL   AVS
Subjt:  MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS

Query:  AAPCGHCRQFLQEVRAAAEIKILVASIEN--------ESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKL
        AAPCGHCRQFLQE+R A EIKIL+    N        +S+ F+ L  FLPHRFGP DLL KD PLLLE   N L + D      ++CNG   ++A    L
Subjt:  AAPCGHCRQFLQEVRAAAEIKILVASIEN--------ESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKL

Query:  KRAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEF
        K+ AL AAN S+APYS CPSGV+L+D DG++Y+G YMESAAYNPSMGPVQ+A+V YVA GGGGGYE+IV AVLVEKE   V+QEHTARLLL+ ISP+CEF
Subjt:  KRAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEF

Query:  RVAHC
        +V HC
Subjt:  RVAHC

AT4G29570.1 Cytidine/deoxycytidylate deaminase family protein9.6e-5544Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVSA---
        RF++   E ES     G   PQ L  L+  A    R  IS   V AVG GSSGR FFGVN+E PGLPL HS+HAEQFL+ NLAL+ E  L+ +A+S    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVSA---

Query:  ---APCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE
            PCGHC Q L ++R  ++ KIL+ +   +   ++ L  FLP       +   +VP LLE   N + L + +          H        L   AL+
Subjt:  ---APCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALE

Query:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVIS-PECEFRVAHC
        AA  S+AP S+CPSGVAL+D  G++Y G YMES A+N S+GPVQ+A+V +VA G G  ++ IV AVLVEK+   + QE TAR++L+ I+ P+C FRV HC
Subjt:  AANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVIS-PECEFRVAHC

AT4G29600.1 Cytidine/deoxycytidylate deaminase family protein6.0e-7351.15Show/hide
Query:  DGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS-
        D  +FV  A EA S     G+T P  LP L++ A +LAR PISKY VGAVG  SSGRV+ GVN+EFPGLPLHHS+H EQFLVTNLALN E  L+ LAV+ 
Subjt:  DGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS-

Query:  -------AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLK
                APCG+CRQFL E     +IKIL+ S       F  L   LP+RF P D+L K  PLLLE R N L+L   T             ++    LK
Subjt:  -------AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLK

Query:  RAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVI-SPECEF
          AL AAN S +PY+  PSGVAL D +G+ Y+G Y+ES AY+PS+GPVQ+A+V +VA   G G+ KIV AVLVEK    V QE TA+++L  I +P C+F
Subjt:  RAALEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVI-SPECEF

Query:  RVAHC
        +V HC
Subjt:  RVAHC

AT4G29610.1 Cytidine/deoxycytidylate deaminase family protein4.2e-7450.83Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----
        +FV   SE    A + G+  P  LP L+  A +LAR P+S + VGAVGL SSG VF GVN+EFP LPLHH++HAEQFLVTNLALN    L  +AVS    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----

Query:  --AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSL--PDETAGNPTLCNGGHAAAAGWEKLKRAA
           APCGHCRQF QE+R A EI+IL+   ++  ++F+ L   +P RFGP  +L +D  LLLE R N L L  P+E   +P  C+            K  A
Subjt:  --AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSL--PDETAGNPTLCNGGHAAAAGWEKLKRAA

Query:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH
        L AAN+S+APYS+CPSGVAL+   G +YKG Y+ES AYNPS+GPV++A+V +VA GGG  + +I   VLVE + V+V QE TAR  L  I+P+C+F+V H
Subjt:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH

Query:  C
        C
Subjt:  C

AT4G29620.1 Cytidine/deoxycytidylate deaminase family protein2.4e-6649.17Show/hide
Query:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----
        +FV  A+E    A   G+T P  LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN++FPGLPLHHS+HAEQFLVTNLALN E  L  LAV+    
Subjt:  RFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVS----

Query:  ----AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAA
              PCG+C QFL E+  A ++KIL +  ++E+  F  L   LP      ++L K  P LLE R N L+L           + G   +     LKR A
Subjt:  ----AAPCGHCRQFLQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAA

Query:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH
        L AAN S +PY+  PSGVAL+D DG  Y+G Y+ES A NPS+GPVQ+A+V +VA   G  + KIV AVLVEK    V QE TA+++L  I+P C+F+V H
Subjt:  LEAANESHAPYSRCPSGVALMDADGRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAH

Query:  C
        C
Subjt:  C


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGACCTAGATTCGTAATCGAAGCGTCGGAAGCCGAATCCATGGCGAAGAAATCCGGCATCACAATCCCTCAGCTTCTGCCGTCTCTGGTGAAATCGGCGCAGGC
CCTGGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCCGTCGGGCTTGGATCCTCCGGCAGGGTGTTCTTCGGCGTCAATCTCGAATTCCCGGGCCTTCCTCTGCATC
ACTCTGTTCACGCCGAGCAATTCCTCGTCACGAATCTCGCCCTCAACGGCGAATCGCATCTTAAATCCCTCGCCGTCTCCGCCGCGCCCTGCGGCCATTGCCGCCAATTT
CTCCAAGAAGTTCGCGCCGCGGCGGAGATCAAAATCCTCGTCGCCTCAATCGAAAACGAATCCGAAGATTTCATTCCCCTGCCCCAATTTCTCCCCCACCGATTCGGCCC
CTACGATCTCCTCGCTAAGGACGTGCCGCTGCTCCTCGAGCCCCGCTGTAATGGCCTTTCCCTGCCGGACGAAACCGCCGGAAATCCTACTCTGTGTAATGGCGGTCACG
CCGCCGCCGCTGGCTGGGAAAAACTGAAACGCGCCGCCCTGGAAGCCGCGAATGAGTCGCACGCGCCGTACAGCCGATGCCCATCGGGAGTTGCGTTAATGGACGCCGAC
GGACGAATCTACAAAGGATCGTACATGGAATCGGCGGCGTACAACCCTAGCATGGGGCCGGTGCAGTCGGCGGTGGTGGCGTACGTGGCCGGCGGCGGCGGCGGTGGATA
TGAGAAGATCGTCGCCGCCGTTTTGGTGGAGAAGGAAGGCGTGGAGGTTAAGCAAGAGCACACGGCGAGGCTGTTGCTGCAAGTGATATCGCCGGAGTGTGAATTCAGAG
TGGCTCATTGCATCGCCGGCGGC
mRNA sequenceShow/hide mRNA sequence
ATGGATGGACCTAGATTCGTAATCGAAGCGTCGGAAGCCGAATCCATGGCGAAGAAATCCGGCATCACAATCCCTCAGCTTCTGCCGTCTCTGGTGAAATCGGCGCAGGC
CCTGGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCCGTCGGGCTTGGATCCTCCGGCAGGGTGTTCTTCGGCGTCAATCTCGAATTCCCGGGCCTTCCTCTGCATC
ACTCTGTTCACGCCGAGCAATTCCTCGTCACGAATCTCGCCCTCAACGGCGAATCGCATCTTAAATCCCTCGCCGTCTCCGCCGCGCCCTGCGGCCATTGCCGCCAATTT
CTCCAAGAAGTTCGCGCCGCGGCGGAGATCAAAATCCTCGTCGCCTCAATCGAAAACGAATCCGAAGATTTCATTCCCCTGCCCCAATTTCTCCCCCACCGATTCGGCCC
CTACGATCTCCTCGCTAAGGACGTGCCGCTGCTCCTCGAGCCCCGCTGTAATGGCCTTTCCCTGCCGGACGAAACCGCCGGAAATCCTACTCTGTGTAATGGCGGTCACG
CCGCCGCCGCTGGCTGGGAAAAACTGAAACGCGCCGCCCTGGAAGCCGCGAATGAGTCGCACGCGCCGTACAGCCGATGCCCATCGGGAGTTGCGTTAATGGACGCCGAC
GGACGAATCTACAAAGGATCGTACATGGAATCGGCGGCGTACAACCCTAGCATGGGGCCGGTGCAGTCGGCGGTGGTGGCGTACGTGGCCGGCGGCGGCGGCGGTGGATA
TGAGAAGATCGTCGCCGCCGTTTTGGTGGAGAAGGAAGGCGTGGAGGTTAAGCAAGAGCACACGGCGAGGCTGTTGCTGCAAGTGATATCGCCGGAGTGTGAATTCAGAG
TGGCTCATTGCATCGCCGGCGGC
Protein sequenceShow/hide protein sequence
MDGPRFVIEASEAESMAKKSGITIPQLLPSLVKSAQALARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNGESHLKSLAVSAAPCGHCRQF
LQEVRAAAEIKILVASIENESEDFIPLPQFLPHRFGPYDLLAKDVPLLLEPRCNGLSLPDETAGNPTLCNGGHAAAAGWEKLKRAALEAANESHAPYSRCPSGVALMDAD
GRIYKGSYMESAAYNPSMGPVQSAVVAYVAGGGGGGYEKIVAAVLVEKEGVEVKQEHTARLLLQVISPECEFRVAHCIAGG