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MS003926 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003926
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0426 protein At1g28150, chloroplastic
Genome locationscaffold1597:799..960
RNA-Seq ExpressionMS003926
SyntenyMS003926
Gene Ontology termsGO:0043086 - negative regulation of catalytic activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63981.2 hypothetical protein Csa_013804 [Cucumis sativus]3.5e-1070.37Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + RNHNSILSSKK +R S+ RLG NNS N + AFFFNP  DPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]3.5e-1070.37Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + RNHNSILSSKK +R S+ RLG NNS N + AFFFNP  DPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]7.1e-1172.22Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + R+H+SILSSKK MR S+LRLG NNS N + AFFFNP EDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
XP_022137739.1 UPF0426 protein At1g28150, chloroplastic [Momordica charantia]5.8e-21100Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]3.5e-1068.52Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + RNH+SILSS K +RG++LRL CNN  N + AFFFNP EDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
TrEMBL top hitse value%identityAlignment
A0A0A0LT92 Uncharacterized protein1.7e-1070.37Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + RNHNSILSSKK +R S+ RLG NNS N + AFFFNP  DPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic3.5e-1172.22Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + R+H+SILSSKK MR S+LRLG NNS N + AFFFNP EDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
A0A5D3BGH6 UPF0426 protein3.5e-1172.22Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +GKL + R+H+SILSSKK MR S+LRLG NNS N + AFFFNP EDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
A0A6J1C844 UPF0426 protein At1g28150, chloroplastic2.8e-21100Show/hide
Query:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
Subjt:  IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic1.8e-0763.27Show/hide
Query:  QERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
        +E N +SI S KK MR + LRLGCNNS N++ AF F P EDPV+KEALK
Subjt:  QERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGGGAAATTGAACCAGGAGCGGAATCATAATTCAATTTTATCATCCAAGAAGTCCATGCGTGGCAGCTATCTCCGTCTCGGTTGCAACAATTCTAGAAATAGCGTCCG
AGCATTTTTCTTCAATCCTGCAGAGGATCCTGTCCTCAAAGAAGCTCTTAAG
mRNA sequenceShow/hide mRNA sequence
ATTGGGAAATTGAACCAGGAGCGGAATCATAATTCAATTTTATCATCCAAGAAGTCCATGCGTGGCAGCTATCTCCGTCTCGGTTGCAACAATTCTAGAAATAGCGTCCG
AGCATTTTTCTTCAATCCTGCAGAGGATCCTGTCCTCAAAGAAGCTCTTAAG
Protein sequenceShow/hide protein sequence
IGKLNQERNHNSILSSKKSMRGSYLRLGCNNSRNSVRAFFFNPAEDPVLKEALK