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MS003927 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003927
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAnkyrin repeat domain-containing protein 50 isoform 1
Genome locationscaffold1597:1878..3098
RNA-Seq ExpressionMS003927
SyntenyMS003927
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98873.1 Ankyrin repeat domain-containing protein 50 isoform 1 [Cucumis melo var. makuwa]1.8e-6984.39Show/hide
Query:  DLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-LSASLADSAPASVPLALRVEPKPKSGIR
        DLGFSYRVADT RCKRLQENVEVTFMDEAPWT MICSI +SRWK RRMQSASL ALRNEPLQHSRYPF I+  SASLADSAPASVPLALRVEPKPKSGIR
Subjt:  DLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-LSASLADSAPASVPLALRVEPKPKSGIR

Query:  QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        QQDLLKRVVEVKPKRPRVS    LSN K D +++  KE PL KTNK+EGE EAENPVKSLLGLAYASSDDED+
Subjt:  QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

XP_021658243.1 uncharacterized protein LOC110648339 isoform X2 [Hevea brasiliensis]2.2e-4058.12Show/hide
Query:  RDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKILLSASLADSAPASVPLALRVEPKPKSGIR
        RDLGFS  V D  RCKRL ENVE TFM EAPWTAM C IS+SRWK +RMQ+A    LRN  L H      +  +ASLADS+ ASVPL LRVEPKPKSGIR
Subjt:  RDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKILLSASLADSAPASVPLALRVEPKPKSGIR

Query:  QQDLLKRVVEVKPKRPRVSGQGALSNS-KVDVDHENG---------KETPLSKTNKSEGEKE---------AENPVKSLLGLAYASSDDED
        QQDLLK+VVEVKPKRP+VS     ++S +   DH +          KE  L K+ K++  KE          EN VKSLLGLAYASSDDED
Subjt:  QQDLLKRVVEVKPKRPRVSGQGALSNS-KVDVDHENG---------KETPLSKTNKSEGEKE---------AENPVKSLLGLAYASSDDED

XP_022137528.1 uncharacterized protein LOC111008953 isoform X1 [Momordica charantia]2.8e-4399Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        +ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

XP_022137529.1 uncharacterized protein LOC111008953 isoform X2 [Momordica charantia]2.8e-4399Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        +ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

XP_037494528.1 uncharacterized protein LOC105639761 isoform X2 [Jatropha curcas]4.2e-3957.75Show/hide
Query:  RDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKILLSASLADSAPASVPLALRVEPKPKSGIR
        RDLG    + D  RCKRL ENVE TFM EAPW  M   ISKS+WKLRRMQ+A   A RN  L H      +  +ASLADS+PASVPL LRVEPKPKSGIR
Subjt:  RDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKILLSASLADSAPASVPLALRVEPKPKSGIR

Query:  QQDLLKRVVEVKPKRPRVSG---------QGALSNSKVDVDH------ENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDED
        QQDLLK+VVEVKPKRPRVS            A SNSKVD +       E GK + +++    + + E+ENP++SLLG AYASSDDED
Subjt:  QQDLLKRVVEVKPKRPRVSG---------QGALSNSKVDVDH------ENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDED

TrEMBL top hitse value%identityAlignment
A0A5D3BHW1 Ankyrin repeat domain-containing protein 50 isoform 18.5e-7084.39Show/hide
Query:  DLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-LSASLADSAPASVPLALRVEPKPKSGIR
        DLGFSYRVADT RCKRLQENVEVTFMDEAPWT MICSI +SRWK RRMQSASL ALRNEPLQHSRYPF I+  SASLADSAPASVPLALRVEPKPKSGIR
Subjt:  DLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-LSASLADSAPASVPLALRVEPKPKSGIR

Query:  QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        QQDLLKRVVEVKPKRPRVS    LSN K D +++  KE PL KTNK+EGE EAENPVKSLLGLAYASSDDED+
Subjt:  QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

A0A6J1C7G8 uncharacterized protein LOC111008953 isoform X21.4e-4399Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        +ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

A0A6J1CAK6 uncharacterized protein LOC111008953 isoform X11.4e-4399Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
        +ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD

A0A7N2MS83 Uncharacterized protein2.5e-4554.72Show/hide
Query:  CPGRDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-----------------LSASLADS
        C  RDLGF YR  D  +CKRLQE+VE TFM EAPWT MI SIS+S+WKLRRMQ+ S   LRN  L   RYPF +L                  +ASLADS
Subjt:  CPGRDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL-----------------LSASLADS

Query:  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPR------------VSGQGALSNSKVDVDHE--------NGKETPLSKTNKSEGEKEAENPVKSL
        +PASVPL LRVEPKPKSGIRQQ LLK+VVE+KPKR R             S   AL + K +   E          KE PLS+ NK+EG+   ENPVKSL
Subjt:  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPR------------VSGQGALSNSKVDVDHE--------NGKETPLSKTNKSEGEKEAENPVKSL

Query:  LGLAYASSDDED
        LGLAYASS+D+D
Subjt:  LGLAYASSDDED

A0A7N2REZ9 Uncharacterized protein4.4e-5056.62Show/hide
Query:  EESFLITCPGRDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL----------------LS
        E SFLITC GR+LGF YR  D  RCKRLQE+VE TFM EAPWT MI SIS+S+WKLRRMQ+AS   LRN  L   RYPF +L                 +
Subjt:  EESFLITCPGRDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKIL----------------LS

Query:  ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPR------------VSGQGALSNSKVDVDHE--------NGKETPLSKTNKSEGEKEAE
        ASLADS+PASVPL LRVEPKPKSGIRQQ LLK+VVE+KPKR R             S   AL + K +   E          KE PLS+ NK+EG+   E
Subjt:  ASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPR------------VSGQGALSNSKVDVDHE--------NGKETPLSKTNKSEGEKEAE

Query:  NPVKSLLGLAYASSDDEDD
        NPVKSLLGLAYASS+D++D
Subjt:  NPVKSLLGLAYASSDDEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73350.1 unknown protein1.3e-1747.06Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA
        +A+ ADS+PAS+PL LRVEPKPKSGIRQQDLL++VVEVKPKRP++S   + S             +KV  D +  +  P+ K           +E   + 
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA

Query:  ENPVKSLLGLAYASSDDED
        +N  K LLGLAY SSD+ED
Subjt:  ENPVKSLLGLAYASSDDED

AT1G73350.2 unknown protein1.3e-1747.06Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA
        +A+ ADS+PAS+PL LRVEPKPKSGIRQQDLL++VVEVKPKRP++S   + S             +KV  D +  +  P+ K           +E   + 
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA

Query:  ENPVKSLLGLAYASSDDED
        +N  K LLGLAY SSD+ED
Subjt:  ENPVKSLLGLAYASSDDED

AT1G73350.3 unknown protein1.3e-1747.06Show/hide
Query:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA
        +A+ ADS+PAS+PL LRVEPKPKSGIRQQDLL++VVEVKPKRP++S   + S             +KV  D +  +  P+ K           +E   + 
Subjt:  SASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSGQGALS------------NSKVDVDHENGKETPLSKT--------NKSEGEKEA

Query:  ENPVKSLLGLAYASSDDED
        +N  K LLGLAY SSD+ED
Subjt:  ENPVKSLLGLAYASSDDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACATGCAGATGCAAGAGGTTGCAGGAGAACGTGGAGGTTACCTTCAT
GGACGAGGCGCCTTGGACAGCGATGATCTGCTCTATCTCAAAGAGCAGATGGAAGCTGAGGAGGATGCAGAGCGCCTCCTTAGGCGCACTGAGAAACGAGCCTTTGCAGC
ATTCAAGATATCCTTTCAAGATTCTGCTGTCTGCTAGTTTGGCAGATTCTGCTCCTGCATCTGTCCCTTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGA
CAGCAAGATCTATTGAAAAGGGTAGTGGAAGTCAAACCTAAAAGGCCCAGAGTTTCAGGTCAAGGAGCTTTGTCAAATTCCAAGGTTGACGTTGACCATGAAAATGGGAA
AGAGACCCCCTTATCAAAAACTAACAAAAGTGAAGGCGAAAAAGAAGCTGAAAATCCTGTCAAAAGTTTACTAGGTTTGGCATACGCTAGTTCTGATGATGAAGATGAC
mRNA sequenceShow/hide mRNA sequence
GAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACATGCAGATGCAAGAGGTTGCAGGAGAACGTGGAGGTTACCTTCAT
GGACGAGGCGCCTTGGACAGCGATGATCTGCTCTATCTCAAAGAGCAGATGGAAGCTGAGGAGGATGCAGAGCGCCTCCTTAGGCGCACTGAGAAACGAGCCTTTGCAGC
ATTCAAGATATCCTTTCAAGATTCTGCTGTCTGCTAGTTTGGCAGATTCTGCTCCTGCATCTGTCCCTTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGA
CAGCAAGATCTATTGAAAAGGGTAGTGGAAGTCAAACCTAAAAGGCCCAGAGTTTCAGGTCAAGGAGCTTTGTCAAATTCCAAGGTTGACGTTGACCATGAAAATGGGAA
AGAGACCCCCTTATCAAAAACTAACAAAAGTGAAGGCGAAAAAGAAGCTGAAAATCCTGTCAAAAGTTTACTAGGTTTGGCATACGCTAGTTCTGATGATGAAGATGAC
Protein sequenceShow/hide protein sequence
EESFLITCPGRDLGFSYRVADTCRCKRLQENVEVTFMDEAPWTAMICSISKSRWKLRRMQSASLGALRNEPLQHSRYPFKILLSASLADSAPASVPLALRVEPKPKSGIR
QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPLSKTNKSEGEKEAENPVKSLLGLAYASSDDEDD