; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003939 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003939
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description1,3-beta-glucan synthase
Genome locationscaffold1597:61321..61574
RNA-Seq ExpressionMS003939
SyntenyMS003939
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133898.1 putative callose synthase 8 [Momordica charantia]4.2e-1867.86Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLP-DDDSLIEQVK
        +QGNKMTRERVIRVL DIFELVTSEMM DG R +   ++S       +  S  IEPQLFESS SKESI+FPLP DDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLP-DDDSLIEQVK

XP_038897949.1 putative callose synthase 8 isoform X1 [Benincasa hispida]5.4e-1865.06Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QGN++ RERVIRVL DIFELVTS+MM +GSR +   ++S       +  S  IEPQLFESSSSKESI+FPLPDDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

XP_038897950.1 putative callose synthase 8 isoform X2 [Benincasa hispida]5.4e-1865.06Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QGN++ RERVIRVL DIFELVTS+MM +GSR +   ++S       +  S  IEPQLFESSSSKESI+FPLPDDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

XP_038897951.1 putative callose synthase 8 isoform X3 [Benincasa hispida]5.4e-1865.06Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QGN++ RERVIRVL DIFELVTS+MM +GSR +   ++S       +  S  IEPQLFESSSSKESI+FPLPDDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

XP_038897952.1 putative callose synthase 8 isoform X4 [Benincasa hispida]5.4e-1865.06Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QGN++ RERVIRVL DIFELVTS+MM +GSR +   ++S       +  S  IEPQLFESSSSKESI+FPLPDDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

TrEMBL top hitse value%identityAlignment
A0A5A7VNM2 1,3-beta-glucan synthase6.5e-1762.07Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSI----VYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QGN+  R+RVI+VL DIFELVTS+MM DGSRFVSS    ++    I    +  S  IEPQLFES SSKESI+FPLP DDSL EQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSI----VYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

A0A6J1C0H9 1,3-beta-glucan synthase2.0e-1867.86Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLP-DDDSLIEQVK
        +QGNKMTRERVIRVL DIFELVTSEMM DG R +   ++S       +  S  IEPQLFESS SKESI+FPLP DDDSLIEQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLP-DDDSLIEQVK

A0A6J1ITG5 1,3-beta-glucan synthase1.9e-1661.45Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QG+K  RERVIRVL DIFELVTS+MM +GSR +   +++       +  S  IEPQLFESS+SKESI+FPLPDDDSL EQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

A0A6J1IW07 1,3-beta-glucan synthase1.9e-1661.45Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QG+K  RERVIRVL DIFELVTS+MM +GSR +   +++       +  S  IEPQLFESS+SKESI+FPLPDDDSL EQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

A0A6J1IYY5 1,3-beta-glucan synthase1.9e-1661.45Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        +QG+K  RERVIRVL DIFELVTS+MM +GSR +   +++       +  S  IEPQLFESS+SKESI+FPLPDDDSL EQ+K
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

SwissProt top hitse value%identityAlignment
Q9LUD7 Putative callose synthase 82.2e-0638.55Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        V+ ++    ++++ L DIFELVT++MM+ G R +    S              IEPQLFES      I+FPLPD  SL EQ++
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK

Arabidopsis top hitse value%identityAlignment
AT3G14570.1 glucan synthase-like 41.6e-0738.55Show/hide
Query:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK
        V+ ++    ++++ L DIFELVT++MM+ G R +    S              IEPQLFES      I+FPLPD  SL EQ++
Subjt:  VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCAAGGGAATAAGATGACTCGGGAAAGAGTTATAAGAGTTCTCCCAGATATATTTGAACTTGTAACCAGTGAAATGATGATGGATGGCTCCAGGTTTGTTTCCTCTAC
ATTTTCTTCCATATTTGAGATCTGGTCTATCGTCTACGGTTCTGAACAAATAGAGCCGCAACTATTTGAATCCTCATCTAGCAAGGAATCTATTAATTTCCCCTTGCCAG
ATGATGACTCTCTCATAGAACAGGTGAAG
mRNA sequenceShow/hide mRNA sequence
GTTCAAGGGAATAAGATGACTCGGGAAAGAGTTATAAGAGTTCTCCCAGATATATTTGAACTTGTAACCAGTGAAATGATGATGGATGGCTCCAGGTTTGTTTCCTCTAC
ATTTTCTTCCATATTTGAGATCTGGTCTATCGTCTACGGTTCTGAACAAATAGAGCCGCAACTATTTGAATCCTCATCTAGCAAGGAATCTATTAATTTCCCCTTGCCAG
ATGATGACTCTCTCATAGAACAGGTGAAG
Protein sequenceShow/hide protein sequence
VQGNKMTRERVIRVLPDIFELVTSEMMMDGSRFVSSTFSSIFEIWSIVYGSEQIEPQLFESSSSKESINFPLPDDDSLIEQVK