; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003975 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003975
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLYR motif-containing protein 4
Genome locationscaffold1597:247200..247463
RNA-Seq ExpressionMS003975
SyntenyMS003975
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807263.1 putative complex 1 LYR protein [Helianthus annuus]9.5e-2978.16Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK
        MATPSRSEIL+LFRSLLR+ARQF DYNIREYTKRR IDAFR N++LS+PSSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+K
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3393.02Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEIL+LFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSDPSSISS YAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]2.3e-3087.21Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN++LSD SSISS YAGG+AQLEVAKRQA+VYSLYAPKVKSIMDV
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]7.2e-37100Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
        MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]9.8e-3493.18Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
        MATPSRSE+LSLFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSD SSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV L
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.1e-3087.21Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN++LSD SSISS YAGG+AQLEVAKRQA+VYSLYAPKVKSIMDV
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

A0A251UU63 Putative complex 1 LYR protein4.6e-2978.16Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK
        MATPSRSEIL+LFRSLLR+ARQF DYNIREYTKRR IDAFR N++LS+PSSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+K
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK

A0A2I4FW34 LYR motif-containing protein 4-like4.6e-2982.14Show/hide
Query:  PSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK
        P+RSE+LSLFRSLLRTARQFSDYNIREYTKRR ID FR NR+LSDP SI+SA++ GKAQLEVAKRQ+++YSLYAPKVKSIMD+K
Subjt:  PSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK

A0A6J1C8A4 LYR motif-containing protein 43.5e-37100Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
        MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL

A0A7N2MN47 Uncharacterized protein1.0e-2882.14Show/hide
Query:  PSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK
        P+RSE+L LFRSLLRTARQFSDYNIREYTKRR ID FR+NR+LSDP SI+SA++ G+AQLEVAKRQA+VYSLYAPKVKSIMD+K
Subjt:  PSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVK

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 49.2e-1145.45Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR+++L L+R+LLR +++FS YN R Y  RR  DAFREN++++D   I       KA LEV +RQ  +  +YA
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA

B5XD90 LYR motif-containing protein 4B5.6e-0836.71Show/hide
Query:  SEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMD
        +++LSL+R L++ + +F  YN R Y  RR  DAFR NRS+ DP  +      G+  L++ +RQ  +  +Y P  K+I++
Subjt:  SEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMD

Q0VCG0 LYR motif-containing protein 48.6e-0938.96Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR+++L L+R++LR +++F  YN R Y  RR  DAFREN+++ DP  I +     K  L + +RQ  +  +Y+
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA

Q8K215 LYR motif-containing protein 46.0e-1041.56Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR+++L L+R+++R ++ FS YN R Y  RR  DAFREN+++ DP  I +     K  LE+ +RQ  +  LY+
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA

Q9HD34 LYR motif-containing protein 43.5e-1044.16Show/hide
Query:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR+++LSL+R++LR +++FS YN R Y  RR  DAFREN+++ DP  I +     K  L V +RQ  +  LY+
Subjt:  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein4.5e-2160.71Show/hide
Query:  SRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
        S SE+LSL R+LLR  RQF DYNIREY+KRR +D FR N++L+DPS ++ AYA  K QL VA+R   VY  Y PK K+IM+VKL
Subjt:  SRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCCCGTCGAGGTCTGAAATCCTCTCGCTGTTCCGTTCTCTACTGCGCACGGCGCGTCAATTCTCCGATTACAACATCAGAGAATACACCAAACGCCGCGCCAT
TGATGCCTTCCGAGAAAATCGGAGTCTTTCCGATCCTTCATCGATCTCTTCCGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGAGGCAGGCCCTTGTTTACT
CTCTTTACGCCCCCAAGGTCAAGAGTATCATGGATGTTAAGCTC
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCCCGTCGAGGTCTGAAATCCTCTCGCTGTTCCGTTCTCTACTGCGCACGGCGCGTCAATTCTCCGATTACAACATCAGAGAATACACCAAACGCCGCGCCAT
TGATGCCTTCCGAGAAAATCGGAGTCTTTCCGATCCTTCATCGATCTCTTCCGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGAGGCAGGCCCTTGTTTACT
CTCTTTACGCCCCCAAGGTCAAGAGTATCATGGATGTTAAGCTC
Protein sequenceShow/hide protein sequence
MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL