; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003987 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003987
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondormancy-associated protein homolog 4-like
Genome locationscaffold1597:339565..340040
RNA-Seq ExpressionMS003987
SyntenyMS003987
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137069.1 dormancy-associated protein homolog 4-like [Momordica charantia]1.6e-6199.2Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
        MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQS+SQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK

Query:  RRSVDFPRRRPLEGAEPTTPSVYDW
        RRSVDFPRRRPLEGAEPTTPSVYDW
Subjt:  RRSVDFPRRRPLEGAEPTTPSVYDW

XP_022955440.1 dormancy-associated protein homolog 4-like [Cucurbita moschata]1.3e-3667.97Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR
        MSFLQK+WD+TLAGPAPDSGL RLRKYNSFSASRSPPMLS D +S +P  I+IPSPTLS +         SFP+     S+P   PSTPPETPRGD VKR
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR

Query:  LTKRRSVDFPRRRPLEGAEPTTPSVYDW
        LT+RR++D+P RRPLEG E T+PSVYDW
Subjt:  LTKRRSVDFPRRRPLEGAEPTTPSVYDW

XP_022980753.1 dormancy-associated protein homolog 4-like [Cucurbita maxima]1.1e-3567.44Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR
        MSFLQK+WD+TLAGPAPDSGL RLRKYNSFSASRSPPMLS D +S +P  I+IPSPTLS +         SFP+     S+P   PSTPPETPRGD VKR
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR

Query:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW
        LT+RR++D+ PRRRPLEG + T+PSVYDW
Subjt:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW

XP_023527038.1 dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]5.1e-3668.22Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR
        MSFLQK+WD+TLAGPAPDSGL RLRKYNSFSASRSPPMLS D +S +P  I+IPSPTLS +         SFP+     S+P   PSTPPETPRGD VKR
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR

Query:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW
        LT+RR++D+ PRRRPLEG E T+PSVYDW
Subjt:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW

XP_038878401.1 dormancy-associated protein homolog 4-like [Benincasa hispida]1.3e-3974.05Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPS-----PSTPPETPRGDD
        MSFLQK+WDETLAGPAPDSGL RLRKYNSFSASRSPPMLS DV+S IP SI IPSPTL      SQ+Q+ SFP+  SPI+S S     PSTPPETPRGDD
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPS-----PSTPPETPRGDD

Query:  VKRLTKRRSVDFPRRRPLEGAEPTTPSVYDW
        +KRL +RRS+D+PRRRPLEG E T+PSVYDW
Subjt:  VKRLTKRRSVDFPRRRPLEGAEPTTPSVYDW

TrEMBL top hitse value%identityAlignment
A0A0A0L9F5 Uncharacterized protein2.5e-3667.63Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-------IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPS-----PSTPPE
        MSFLQK+WDETLAGPAPDSGL RLRKYNSFSASRSPPMLS DV+S       IP  I IPSPTLS S         SFP+  SP+++PS     PSTPPE
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-------IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPS-----PSTPPE

Query:  TPRG--DDVKRLTKRRSVDFPRRRPLEGAEPTTPSVYDW
        TPR   D  KRL +RRSVD+PRRRPLEGAE T+PSVYDW
Subjt:  TPRG--DDVKRLTKRRSVDFPRRRPLEGAEPTTPSVYDW

A0A6J1C649 dormancy-associated protein homolog 4-like7.6e-6299.2Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
        MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQS+SQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK

Query:  RRSVDFPRRRPLEGAEPTTPSVYDW
        RRSVDFPRRRPLEGAEPTTPSVYDW
Subjt:  RRSVDFPRRRPLEGAEPTTPSVYDW

A0A6J1GCS2 dormancy-associated protein homolog 4-like6.1e-3565.35Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLT
        MSFL K+WDETLAGPAPDSGL RLRKYNSFSASRSPPML+ D  S IPR I+IPSPTLS +               S  ++  P TPPETPRGDD+ RL 
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLT

Query:  KRRSVDFPRRRPLEGAEPT-TPSVYDW
        +RR++D+PRRRPLEG++PT TPSVYDW
Subjt:  KRRSVDFPRRRPLEGAEPT-TPSVYDW

A0A6J1GV52 dormancy-associated protein homolog 4-like6.5e-3767.97Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR
        MSFLQK+WD+TLAGPAPDSGL RLRKYNSFSASRSPPMLS D +S +P  I+IPSPTLS +         SFP+     S+P   PSTPPETPRGD VKR
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR

Query:  LTKRRSVDFPRRRPLEGAEPTTPSVYDW
        LT+RR++D+P RRPLEG E T+PSVYDW
Subjt:  LTKRRSVDFPRRRPLEGAEPTTPSVYDW

A0A6J1J079 dormancy-associated protein homolog 4-like5.5e-3667.44Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR
        MSFLQK+WD+TLAGPAPDSGL RLRKYNSFSASRSPPMLS D +S +P  I+IPSPTLS +         SFP+     S+P   PSTPPETPRGD VKR
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVIS-IPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP--SPSTPPETPRGDDVKR

Query:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW
        LT+RR++D+ PRRRPLEG + T+PSVYDW
Subjt:  LTKRRSVDF-PRRRPLEGAEPTTPSVYDW

SwissProt top hitse value%identityAlignment
F4HV65 Dormancy-associated protein homolog 43.6e-0845.74Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASR-SPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASP-ISSPSPSTP--PETP
        M FL K+WDET+AGP PD+GLG+LRK++S S  R SPP LS D   + RSI      ++   +  +   +   DP SP  SS +P TP  P TP
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASR-SPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASP-ISSPSPSTP--PETP

Arabidopsis top hitse value%identityAlignment
AT1G28330.1 dormancy-associated protein-like 17.6e-0631.58Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
        M  L+K+WD+ +AGP PD GLGRLRK  +                  + I+I       S      +S + P   SP  +P+  T P TPR D+V R   
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK

Query:  RRSVDFPRR--------RPLEGAEPTTPSVYDW
            +   R        +P     P +PSVYDW
Subjt:  RRSVDFPRR--------RPLEGAEPTTPSVYDW

AT1G28330.4 dormancy-associated protein-like 17.6e-0631.58Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK
        M  L+K+WD+ +AGP PD GLGRLRK  +                  + I+I       S      +S + P   SP  +P+  T P TPR D+V R   
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTK

Query:  RRSVDFPRR--------RPLEGAEPTTPSVYDW
            +   R        +P     P +PSVYDW
Subjt:  RRSVDFPRR--------RPLEGAEPTTPSVYDW

AT1G54070.1 Dormancy/auxin associated family protein2.5e-0945.74Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASR-SPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASP-ISSPSPSTP--PETP
        M FL K+WDET+AGP PD+GLG+LRK++S S  R SPP LS D   + RSI      ++   +  +   +   DP SP  SS +P TP  P TP
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASR-SPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASP-ISSPSPSTP--PETP

AT1G56220.2 Dormancy/auxin associated family protein1.3e-0533.04Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFS---------------ASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPST
        M  L  +WD+T+AGP P++GLG+LRK+++FS                S     L  + + + RSI I  P      S   S + S P P SP S      
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFS---------------ASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPST

Query:  PPETPRGDDVKR
        PP +P   D +R
Subjt:  PPETPRGDDVKR

AT1G56220.3 Dormancy/auxin associated family protein1.3e-0534.38Show/hide
Query:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFS---------------ASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP
        M  L  +WD+T+AGP P++GLG+LRK+++FS                S     L  + + + RSI I  P      S   S + S P P SP S P
Subjt:  MSFLQKIWDETLAGPAPDSGLGRLRKYNSFS---------------ASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCCTCCAAAAGATTTGGGACGAAACCCTTGCCGGTCCGGCGCCCGATTCCGGCCTCGGACGCCTCCGCAAGTACAATTCCTTCTCTGCCTCCAGATCTCCGCC
GATGTTATCCGGCGACGTGATCTCGATTCCTCGGAGTATTGACATTCCTAGCCCTACGCTCTCTCATAGTCTGAGTCAGAGTCAGAGTCAGAGTCGGAGCTTTCCTGATC
CTGCATCGCCGATCAGCTCACCATCGCCGTCGACTCCACCTGAGACGCCGCGTGGTGACGATGTCAAGAGACTTACGAAGAGAAGATCGGTCGATTTTCCTCGCCGCCGG
CCGCTGGAAGGAGCTGAACCAACAACTCCTTCTGTTTATGATTGG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCCTCCAAAAGATTTGGGACGAAACCCTTGCCGGTCCGGCGCCCGATTCCGGCCTCGGACGCCTCCGCAAGTACAATTCCTTCTCTGCCTCCAGATCTCCGCC
GATGTTATCCGGCGACGTGATCTCGATTCCTCGGAGTATTGACATTCCTAGCCCTACGCTCTCTCATAGTCTGAGTCAGAGTCAGAGTCAGAGTCGGAGCTTTCCTGATC
CTGCATCGCCGATCAGCTCACCATCGCCGTCGACTCCACCTGAGACGCCGCGTGGTGACGATGTCAAGAGACTTACGAAGAGAAGATCGGTCGATTTTCCTCGCCGCCGG
CCGCTGGAAGGAGCTGAACCAACAACTCCTTCTGTTTATGATTGG
Protein sequenceShow/hide protein sequence
MSFLQKIWDETLAGPAPDSGLGRLRKYNSFSASRSPPMLSGDVISIPRSIDIPSPTLSHSLSQSQSQSRSFPDPASPISSPSPSTPPETPRGDDVKRLTKRRSVDFPRRR
PLEGAEPTTPSVYDW