CuGenDBv2

Gene ID	MS003996
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function (DUF1118)
Genome location	scaffold1597:419763..420501
RNA-Seq Expression	MS003996
Synteny	MS003996
Gene Ontology terms	GO:0010027 - thylakoid membrane organization (biological process) GO:0010196 - nonphotochemical quenching (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0090391 - granum assembly (biological process) GO:0009515 - granal stacked thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009500 - Protein of unknown function DUF1118

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137438.1 uncharacterized protein LOC101204037 [Cucumis sativus]

4.1e-80

88.61

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Query:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE
        MEVTSFCSSS R  SF+YSYP  T SR        PL + SMA EKPLPSAAKTVGSKKIN+TVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAE
Subjt:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE

Query:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR
        KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ AVALVS+VGGSAAFAASNLVSNLQR
Subjt:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR

Query:  SN
        SN
Subjt:  SN

XP_022137623.1 uncharacterized protein LOC111009021 [Momordica charantia]

6.4e-97

100

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

XP_022954525.1 uncharacterized protein LOC111456768 [Cucurbita moschata]

3.8e-81

87.56

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        ME+ S  SS+R  SF+YSYP KTKS+  NPST SPL V +MAAEKP  SA KT+ SKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAA ALVSVVGGSAAFAASNLVS LQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

XP_022994700.1 uncharacterized protein LOC111490350 [Cucurbita maxima]

5.8e-82

88.06

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        MEV S  SS+R  SF+YSYP KTKS+  NPST SPL V +MAAEKP  SA KT+GSKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQAA ALVSV+GGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

XP_023541355.1 uncharacterized protein LOC111801557 [Cucurbita pepo subsp. pepo]

3.4e-82

88.06

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        ME+ S  SS+R  SF+YSYP KTKS+  NPST SPL V +MAAEKP  SA KT+GSKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQL+LLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAA ALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ98 Uncharacterized protein

2.0e-80

88.61

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Query:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE
        MEVTSFCSSS R  SF+YSYP  T SR        PL + SMA EKPLPSAAKTVGSKKIN+TVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAE
Subjt:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE

Query:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR
        KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ AVALVS+VGGSAAFAASNLVSNLQR
Subjt:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR

Query:  SN
        SN
Subjt:  SN

A0A5D3BGQ3 Uncharacterized protein

1.0e-79

88.12

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Query:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE
        MEVTSFCSSS R  SF+YSYP  T SR        PL + SMAAEKP PSA+KTVGSKKIN+TVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAE
Subjt:  MEVTSFCSSS-RGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAE

Query:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR
        KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ AVALVS+VGGSAAFAASNLVSNLQR
Subjt:  KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQR

Query:  SN
        SN
Subjt:  SN

A0A6J1CAU4 uncharacterized protein LOC111009021

3.1e-97

100

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

A0A6J1GSN1 uncharacterized protein LOC111456768

1.8e-81

87.56

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Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        ME+ S  SS+R  SF+YSYP KTKS+  NPST SPL V +MAAEKP  SA KT+ SKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAA ALVSVVGGSAAFAASNLVS LQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

A0A6J1K230 uncharacterized protein LOC111490350

2.8e-82

88.06

Show/hide

Query:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK
        MEV S  SS+R  SF+YSYP KTKS+  NPST SPL V +MAAEKP  SA KT+GSKKINSTVFPLGEKGPRSSISLSTSP IKLLTRVEQLKLLSKAEK
Subjt:  MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEK

Query:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS
        AGLLSAAEKAGLSLSSIEKLGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPED+VWEIVLQAA ALVSV+GGSAAFAASNLVSNLQRS
Subjt:  AGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRS

Query:  N
        N
Subjt:  N

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G74730.1 Protein of unknown function (DUF1118)

2.2e-10

39.67

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Query:  IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATD-PGT-PGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVS
        + +  ++E+ K+LS  EK+GLLS AE  GL+LSS+EKL + SKAE+LG+LS   +  GT P  L S +L  L      V L+P+DS   +V QA +A   
Subjt:  IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATD-PGT-PGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVS

Query:  VVGGSAAFAASNLVSNLQRSN
         + G      S ++  LQ ++
Subjt:  VVGGSAAFAASNLVSNLQRSN

AT5G08050.1 Protein of unknown function (DUF1118)

1.8e-44

63.91

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Query:  SPLLVRSMAAEKPLPSAA-KTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVL
        S L V SMA +KP PSAA +T+ SKK  +T                  PQ+KLLTRVEQLKLL+KAEKAGLLS AEK+G SLS+IE+LGLL+KAEE GVL
Subjt:  SPLLVRSMAAEKPLPSAA-KTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVL

Query:  SAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRSN
        SAAT+P TPG L +LSLGLLLLGP   Y+VPED  WE+V+Q  VAL+SV+GGSAAFAAS  VSNLQ+S+
Subjt:  SAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRSN

Sequences

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CDS sequence

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ATGGAGGTGACATCTTTTTGTAGCAGCAGCAGAGGAATTTCCTTCGTCTATTCTTATCCATGGAAAACCAAATCAAGATTTGATAATCCTTCAACAGTTTCGCCTCTTCT
TGTACGCTCCATGGCTGCCGAGAAACCTCTTCCTTCTGCTGCTAAAACTGTCGGCTCCAAGAAGATAAACTCGACGGTGTTCCCCCTCGGCGAGAAAGGGCCGCGGAGCA
GTATCTCGCTGTCGACTTCACCGCAGATCAAGCTACTGACGAGGGTGGAGCAATTGAAGCTGCTGAGCAAGGCCGAGAAGGCCGGGCTGCTGTCTGCGGCGGAGAAGGCC
GGGTTGTCTCTGTCGTCGATTGAGAAATTAGGGCTTCTCTCGAAGGCCGAGGAATTGGGGGTTCTGTCGGCGGCAACGGACCCGGGAACTCCCGGGGCGCTGCTGAGCCT
CAGCCTAGGGCTTTTGCTTTTGGGGCCTTCGTGCGTGTATTTGGTTCCTGAGGACAGTGTTTGGGAAATCGTGTTGCAGGCGGCGGTGGCTCTGGTGTCCGTGGTGGGTG
GCTCGGCGGCGTTTGCTGCGTCGAATCTGGTTTCCAATTTGCAGAGATCGAAT

mRNA sequence

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Protein sequence

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MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKINSTVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEKAGLLSAAEKA
GLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVSVVGGSAAFAASNLVSNLQRSN

MS003996 (gene) of Bitter gourd (TR) v1 genome