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MS003997 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003997
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRas GTPase-activating protein-binding protein 2-like
Genome locationscaffold1597:421975..422352
RNA-Seq ExpressionMS003997
SyntenyMS003997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137544.1 uncharacterized protein LOC111008967 [Momordica charantia]1.8e-6599.21Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRN PPIRRTILKKSDVEKIMMETNFE
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTATIEEDINTHGGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
XP_022923781.1 uncharacterized protein LOC111431390, partial [Cucurbita moschata]8.7e-6089.68Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPATTK+KAIVPTSNPETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEED+N  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
XP_023001049.1 uncharacterized protein LOC111495303 [Cucurbita maxima]5.1e-6090.48Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPA+TK+KAIVPTSNPETVFDIKY+SRDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEEDIN  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
XP_023520186.1 uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo]9.6e-5988.1Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYR+ CPA+TK+KAIVPTSNPETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEEDIN  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
XP_038895860.1 uncharacterized protein LOC120084028 [Benincasa hispida]4.3e-5988.89Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSS FQTLKRY KKPWEITGPCADPEYRLAVPSA+EYRVFCPATTK+KAIVPTSNPETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEEDIN  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
TrEMBL top hitse value%identityAlignment
A0A0A0LVM5 Uncharacterized protein1.3e-5684.13Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKA+SS  QTL+RYIKKPWEITGPCADPEYR AVPSA+EYRV CPAT K+KAI+PTSNPETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M E  F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEED+NTHGGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
A0A6J1C7I4 uncharacterized protein LOC1110089678.8e-6699.21Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRN PPIRRTILKKSDVEKIMMETNFE
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTATIEEDINTHGGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
A0A6J1E7N6 uncharacterized protein LOC1114313904.2e-6089.68Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPATTK+KAIVPTSNPETVFDIKY++RDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEED+N  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
A0A6J1GSY9 uncharacterized protein LOC1114566823.3e-5785.71Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSS FQTLKR+IKKPWEITGPCADPEYR AVPSA+EYRVFCPATTKQK IVPTSNP+TVFDIKY+SRDQRRNRPPIRR ILKK D+E++M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEEDIN  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
A0A6J1KK07 uncharacterized protein LOC1114953032.5e-6090.48Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE
        MAKASSSFFQTLKRYIKKPWEITGPCADPEY+LAVPSAIEYRVFCPA+TK+KAIVPTSNPETVFDIKY+SRDQRRNRPPIRRTILKK DVEK+M ET F+
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFE

Query:  PADFPKVYLTATIEEDINTHGGGYQK
        PADFPKVYLTA IEEDIN  GGGYQK
Subjt:  PADFPKVYLTATIEEDINTHGGGYQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08060.1 unknown protein2.3e-4262.2Show/hide
Query:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMME-TNF
        ++ A+SS  Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  ++AIVP+S+PETV++I Y  RDQRRNRPPIRR +L K +V ++M E  +F
Subjt:  MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMME-TNF

Query:  EPADFPKVYLTATIEEDINTHGGGYQK
        + +DFPKVYLT T+EED++T GGGY+K
Subjt:  EPADFPKVYLTATIEEDINTHGGGYQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGCTTCATCCTCCTTTTTCCAAACCCTAAAGCGGTATATCAAGAAGCCCTGGGAGATCACCGGCCCCTGTGCGGATCCAGAGTACAGATTGGCCGTGCCGAG
CGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGCAGAAGGCCATCGTTCCTACCTCGAATCCAGAAACTGTCTTCGACATCAAGTATTTCAGCCGCGACCAGC
GTCGCAATCGCCCTCCAATTAGACGCACCATCCTCAAGAAATCTGACGTCGAGAAGATCATGATGGAGACCAATTTCGAACCCGCTGATTTCCCCAAAGTTTATCTGACG
GCCACGATCGAGGAGGATATCAATACCCATGGAGGAGGTTATCAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGCTTCATCCTCCTTTTTCCAAACCCTAAAGCGGTATATCAAGAAGCCCTGGGAGATCACCGGCCCCTGTGCGGATCCAGAGTACAGATTGGCCGTGCCGAG
CGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGCAGAAGGCCATCGTTCCTACCTCGAATCCAGAAACTGTCTTCGACATCAAGTATTTCAGCCGCGACCAGC
GTCGCAATCGCCCTCCAATTAGACGCACCATCCTCAAGAAATCTGACGTCGAGAAGATCATGATGGAGACCAATTTCGAACCCGCTGATTTCCCCAAAGTTTATCTGACG
GCCACGATCGAGGAGGATATCAATACCCATGGAGGAGGTTATCAGAAG
Protein sequenceShow/hide protein sequence
MAKASSSFFQTLKRYIKKPWEITGPCADPEYRLAVPSAIEYRVFCPATTKQKAIVPTSNPETVFDIKYFSRDQRRNRPPIRRTILKKSDVEKIMMETNFEPADFPKVYLT
ATIEEDINTHGGGYQK