; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004008 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004008
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMADS box protein
Genome locationscaffold1597:506245..510263
RNA-Seq ExpressionMS004008
SyntenyMS004008
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR002487 - Transcription factor, K-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650324.1 agamous-like MADS-box protein MADS2 isoform X4 [Cucumis sativus]1.3e-8274.14Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFSNRGKLFEF S SSMTKTLEKYRRC+YG+  AT QV+ N+  +FD+YLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV------LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGH
        TVEF+QQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTK       L    R     +    GL      ++EE SAQVA AAA  WGWE G GGH
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV------LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGH

Query:  SMEHHSRG-ASQTDAFFHPIIQSTPTLQIGYS
        +ME+ SRG ASQ+DAFFHPI+Q TPTLQIGYS
Subjt:  SMEHHSRG-ASQTDAFFHPIIQSTPTLQIGYS

XP_022137566.1 MADS-box protein CMB1-like isoform X1 [Momordica charantia]2.6e-9988.94Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK  K      A   H +  L     G   +VEERSAQVAAAAAATW WEAGGGGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIG
        HHSRGASQTDAFFHPIIQSTPTLQIG
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIG

XP_022137567.1 MADS-box protein CMB1-like isoform X2 [Momordica charantia]3.1e-10088.6Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK  K      A   H +  L     G   +VEERSAQVAAAAAATW WEAGGGGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIGYS
        HHSRGASQTDAFFHPIIQSTPTLQIGY+
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIGYS

XP_038895225.1 agamous-like MADS-box protein MADS2 isoform X1 [Benincasa hispida]9.0e-8476.75Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFSNRGKLFEF S SSMTKTLEKYRRC+YG+ +A  QVNEN   +FD+YLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEF+QQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTK  +S     A   H +H L     G   ++EE SAQ+AAAAAA WGWE   GGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIGYS
        H SR ASQ+DAFFHPIIQ TPTLQ+GY+
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIGYS

XP_038895226.1 agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida]1.0e-8276.75Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFSNRGKLFEF S SSMTKTLEKYRRC+YG+ +A  QVNEN   +FD+YLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEF+QQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTK  +S     A   H +H L     G   ++EE SAQ+AAAAAA WGWE   GGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIGYS
        H SR ASQ+DAFFHPIIQ TPTLQ+GY+
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIGYS

TrEMBL top hitse value%identityAlignment
A0A1S3BWE3 MADS-box protein CMB1-like isoform X31.8e-8275.98Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFSNRGKLFEF S SSMTKTLEKYRRC+YG+  AT QV+EN+  +FD+YLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAG-GGGHSME
        TVEF+QQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTK   L +Q      K H     N     ++EE SAQVA AAAA WGWE G GGGH+ME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAG-GGGHSME

Query:  HHSRG-ASQTDAFFHPIIQSTPTLQIGYS
        + SRG ASQ+DAFFHP IQ TPTLQIGY+
Subjt:  HHSRG-ASQTDAFFHPIIQSTPTLQIGYS

A0A1S3BWT5 MADS-box protein CMB1-like isoform X16.5e-8072.5Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSS-----------SMTKTLEKYRRCNYGVWEATRQVNENRS
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFSNRGKLFEF S S           SMTKTLEKYRRC+YG+  AT QV+EN+ 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSS-----------SMTKTLEKYRRCNYGVWEATRQVNENRS

Query:  YNFDEYLNLKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGW
         +FD+YLNLKATVEF+QQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTK   L +Q      K H     N     ++EE SAQVA AAAA WGW
Subjt:  YNFDEYLNLKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGW

Query:  EAG-GGGHSMEHHSRG-ASQTDAFFHPIIQSTPTLQIGYS
        E G GGGH+ME+ SRG ASQ+DAFFHP IQ TPTLQIGY+
Subjt:  EAG-GGGHSMEHHSRG-ASQTDAFFHPIIQSTPTLQIGYS

A0A6J1C701 MADS-box protein CMB1-like isoform X11.3e-9988.94Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK  K      A   H +  L     G   +VEERSAQVAAAAAATW WEAGGGGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIG
        HHSRGASQTDAFFHPIIQSTPTLQIG
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIG

A0A6J1C8L8 MADS-box protein CMB1-like isoform X21.5e-10088.6Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME
        TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK  K      A   H +  L     G   +VEERSAQVAAAAAATW WEAGGGGHSME
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIG---QVEERSAQVAAAAAATWGWEAGGGGHSME

Query:  HHSRGASQTDAFFHPIIQSTPTLQIGYS
        HHSRGASQTDAFFHPIIQSTPTLQIGY+
Subjt:  HHSRGASQTDAFFHPIIQSTPTLQIGYS

A0A6J1K4C3 MADS-box protein EJ2-like isoform X23.2e-7973.57Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKLFEFS  SSMTKTLEKYRRC+Y + +  R +N N   +FD+YLNLKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK--VLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH
        TVEF+QQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTK   L  Q      K H     N     ++EE SAQVAAA+AA WGWE G GGHSM++
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK--VLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH

Query:  HSRGASQTDAFFHPIIQSTPTLQIGYS
         SR ASQ+DAFF+PI Q  PTLQ+GY+
Subjt:  HSRGASQTDAFFHPIIQSTPTLQIGYS

SwissProt top hitse value%identityAlignment
K4DEK0 MADS-box protein J22.5e-5255.02Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFS+RGKL+EFSS+SSM  TLEKY++C+Y   +    V++ +  N++EY+ LKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH
         VE LQ+SQR++LGEDLG LN KELEQLEHQL+ SL+++RS  T+ +  Q      K       N     ++EE +A++      +WG     GG +ME 
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH

Query:  HSRGASQTDA--FFHPIIQSTPTLQIGYS
        ++R   QT A  FF P+  ++ + Q GY+
Subjt:  HSRGASQTDA--FFHPIIQSTPTLQIGYS

Q03489 Agamous-like MADS-box protein AGL9 homolog4.5e-5458.01Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSSSM KTLE+Y++CNYG  E   +TR+  E  S    EYL 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN

Query:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK--VLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS
        LKA  E LQ+SQRNLLGEDLGPLN KELE LE QL+ SL++IRST+  ++  Q +    K H+ +  N     +  ++     +     W   A   G  
Subjt:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTK--VLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS

Query:  MEHHSRGASQT--DAFFHPIIQSTPTLQIGY
           + R A+QT  D FFHP ++  PTLQIGY
Subjt:  MEHHSRGASQT--DAFFHPIIQSTPTLQIGY

Q7Y040 MADS-box protein EJ25.9e-5455.07Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF S+SSM KT+EKY+RC+Y   EA + V + ++ N+ EYL LKA
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH
         VE LQ+SQRN LGEDLG L+ K+LEQLE+QLE+SL++IRS  T+ +  Q      K       N +   ++EE  A           WE  GG H + H
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH

Query:  HSRGASQTDAFFHPIIQSTPTLQIGYS
               T+ FF P+   + +   GY+
Subjt:  HSRGASQTDAFFHPIIQSTPTLQIGYS

Q8LLR0 Agamous-like MADS-box protein MADS41.3e-5357.21Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSSSM KTLE+Y++CNYG  E   +TR+  E  S    EYL 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN

Query:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS
        LKA  E LQ+SQRNLLGEDLGPL+ KELE LE QL+ SL++IRST+   +  Q      K H  +  N      +++R  +        W   A   G+ 
Subjt:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKV--LKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS

Query:  MEHHSRGASQTDAFFHPIIQSTPTLQIGY
         +   +   Q D FFHP ++  PTLQIGY
Subjt:  MEHHSRGASQTDAFFHPIIQSTPTLQIGY

Q8LLR2 Agamous-like MADS-box protein MADS23.1e-5555.11Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RGKL+EF SSSSM KTLE+Y++C+YG  E +R   E    ++ EYL LK+
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEHHS
          E LQ++QRNLLGEDLGPLN KELEQLE QLETSL+++RSTK          S + ++  + +     +  +  +++        WE+G       H  
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEHHS

Query:  RGASQTDAFFHPIIQSTPTLQIGYS
           +Q+  FF P ++  PTLQIGY+
Subjt:  RGASQTDAFFHPIIQSTPTLQIGYS

Arabidopsis top hitse value%identityAlignment
AT1G24260.2 K-box region and MADS-box transcription factor family protein1.3e-4851.5Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSSSM +TLE+Y++CNYG  E    +R+       +  EYL 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN

Query:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS
        LK   + LQ++QRNLLGEDLGPL+ KELE LE QL++SL++IR+  T+ +  Q     SK       N         ++ ++  A       +       
Subjt:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS

Query:  MEHHSRGASQ----TDAFFHPIIQSTPTLQIGY
        ++H+ R   Q    + AFF P ++  P LQIGY
Subjt:  MEHHSRGASQ----TDAFFHPIIQSTPTLQIGY

AT1G24260.3 K-box region and MADS-box transcription factor family protein3.7e-5152.4Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSSSM +TLE+Y++CNYG  E    +R+       +  EYL 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWE---ATRQVNENRSYNFDEYLN

Query:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS
        LK   + LQ++QRNLLGEDLGPL+ KELE LE QL++SL++IR+  T+ +  Q     SK+   + + +    Q+     +V                H 
Subjt:  LKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHS

Query:  MEHHSRGASQTDAFFHPIIQSTPTLQIGY
          HH +    + AFF P ++  P LQIGY
Subjt:  MEHHSRGASQTDAFFHPIIQSTPTLQIGY

AT3G02310.1 K-box region and MADS-box transcription factor family protein3.7e-5151.52Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEV+LI+FSNRGKL+EF S+S+M KTLE+Y++C+YG  E   +  +    ++ EYL LK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIR--STKVLKSQARSTASKIH----SQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGH
          E LQ+ QRNLLGEDLGPLN KELEQLE QL+ SL+++R   T+ +  Q      K H    +   L++     +  R   +        GWE G   +
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIR--STKVLKSQARSTASKIH----SQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGH

Query:  SMEHHSRGASQTDAFFHPIIQSTPTLQIGYS
            H +  SQ     +  ++  PTLQIGYS
Subjt:  SMEHHSRGASQTDAFFHPIIQSTPTLQIGYS

AT5G15800.1 K-box region and MADS-box transcription factor family protein1.5e-5252.65Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSS+M KTL++Y++C+YG  E   +  +    ++ EYL LK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH
          E LQ+ QRNLLGEDLGPLN KELEQLE QL+ SL+++RS  T+ +  Q     +K       N     ++++     +       GWE G    +  H
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH

Query:  HSRGASQTDAFFHPIIQSTPTLQIGY
        H    +Q+   + P ++  PTLQ+GY
Subjt:  HSRGASQTDAFFHPIIQSTPTLQIGY

AT5G15800.2 K-box region and MADS-box transcription factor family protein9.7e-5252.44Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAEVALIIFSNRGKL+EF SSS+M KTL++Y++C+YG  E   +  +    ++ EYL LK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKA

Query:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH
          E LQ+ QRNLLGEDLGPLN KELEQLE QL+ SL+++RS  T+ +  Q     +K       N     ++++     +       GWE G    +  H
Subjt:  TVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRS--TKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEH

Query:  HSRGASQTDAFFHPIIQSTPTLQIG
        H    +Q+   + P ++  PTLQ+G
Subjt:  HSRGASQTDAFFHPIIQSTPTLQIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGGGAGAGTAGAGCTGAAGAGAATTGAGAACAAAATAAACAGGCAGGTCACATTTGCCAAGAGGAGAAATGGGTTGCTCAAGAAAGCTTATGAACTCTCAAT
TCTCTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTAACCGTGGCAAGCTCTTTGAGTTCTCTAGCTCCTCTAGCATGACCAAAACACTCGAGAAATATCGAAGGTGCA
ATTATGGTGTATGGGAGGCTACTCGCCAAGTAAATGAGAATCGGTCATACAACTTTGACGAATATCTGAACCTAAAAGCTACAGTTGAATTCCTGCAGCAATCTCAAAGA
AATCTTTTGGGGGAAGATTTAGGGCCATTGAATCCTAAGGAACTTGAACAGCTTGAGCATCAATTGGAGACATCTTTGGAGCGCATTAGATCCACAAAGGTACTCAAAAG
TCAAGCTAGAAGTACTGCATCCAAAATTCATTCTCAACATGGTTTAAATATTATCGGGATTGGACAGGTGGAAGAAAGAAGTGCACAAGTGGCAGCGGCGGCAGCCGCCA
CATGGGGCTGGGAAGCCGGCGGCGGAGGGCACAGCATGGAGCATCACAGCCGTGGTGCTTCACAAACAGACGCCTTCTTCCACCCCATAATACAATCCACTCCCACTTTA
CAAATTGGGTATTCA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGGGAGAGTAGAGCTGAAGAGAATTGAGAACAAAATAAACAGGCAGGTCACATTTGCCAAGAGGAGAAATGGGTTGCTCAAGAAAGCTTATGAACTCTCAAT
TCTCTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTAACCGTGGCAAGCTCTTTGAGTTCTCTAGCTCCTCTAGCATGACCAAAACACTCGAGAAATATCGAAGGTGCA
ATTATGGTGTATGGGAGGCTACTCGCCAAGTAAATGAGAATCGGTCATACAACTTTGACGAATATCTGAACCTAAAAGCTACAGTTGAATTCCTGCAGCAATCTCAAAGA
AATCTTTTGGGGGAAGATTTAGGGCCATTGAATCCTAAGGAACTTGAACAGCTTGAGCATCAATTGGAGACATCTTTGGAGCGCATTAGATCCACAAAGGTACTCAAAAG
TCAAGCTAGAAGTACTGCATCCAAAATTCATTCTCAACATGGTTTAAATATTATCGGGATTGGACAGGTGGAAGAAAGAAGTGCACAAGTGGCAGCGGCGGCAGCCGCCA
CATGGGGCTGGGAAGCCGGCGGCGGAGGGCACAGCATGGAGCATCACAGCCGTGGTGCTTCACAAACAGACGCCTTCTTCCACCCCATAATACAATCCACTCCCACTTTA
CAAATTGGGTATTCA
Protein sequenceShow/hide protein sequence
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSSSSSMTKTLEKYRRCNYGVWEATRQVNENRSYNFDEYLNLKATVEFLQQSQR
NLLGEDLGPLNPKELEQLEHQLETSLERIRSTKVLKSQARSTASKIHSQHGLNIIGIGQVEERSAQVAAAAAATWGWEAGGGGHSMEHHSRGASQTDAFFHPIIQSTPTL
QIGYS